BP913614 |
Clone id |
YMU001_000032_C03 |
Library |
YMU01 |
Length |
511 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000032_C03. |
Accession |
BP913614 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GGCTTTGTCATTAGAGCAACTGAATACCTTCCAGCCAGTTGATGGAATGGTTTTAGCCAA CACCACGTCAGTGGGCATGTCTCCAAACATAGCAGAGACCCCGATTGCTAAGGATGCTTT AAGAAAATACAGTCTTGTATTTGATGCGGTGTACACACCGAGAATCACAAGACTCTTAAC GGAAGCTGAAGAGTCGGGAGCAGAGGTTGTGAGTGGACTTGAGATGTTCATACGCCAGGC AATAAAGCAATTCTCTCTGTTTACAGGGGGCAGTGCTCCAGAGAAACTCATGAGAGATAT GATGGCCAACACCCTATGACCGAGAGGATCTACAAGAATCACCCAAGAAAGACTATACAG ACAGTGGCGAGTCTATGAATGATCCCACCAAGTCGTTGATTAACTCAAGATGCTATGAGT TATCAAATAGCTGTAATTGCTATCATCTAAAATAATACAAGGAAGATTCGCGGCCGCGAA TTCTTCCAGGAGTACCTGCAGGTAATATCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SQT8 |
Definition |
sp|Q9SQT8|DHQSD_ARATH Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic OS=Arabidopsis thaliana |
Align length |
102 |
Score (bit) |
138.0 |
E-value |
1.0e-32 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7XEE1 |
Definition |
tr|A7XEE1|A7XEE1_9ROSI 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) OS=Juglans regia |
Align length |
103 |
Score (bit) |
139.0 |
E-value |
9.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913614|Adiantum capillus-veneris mRNA, clone: YMU001_000032_C03. (465 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7XEE1|A7XEE1_9ROSI 3-dehydroquinate dehydratase/shikimate 5-... 139 9e-32 tr|A7NW96|A7NW96_VITVI Chromosome chr5 scaffold_2, whole genome ... 134 2e-30 tr|Q30D00|Q30D00_FAGSY Putative 3-dehydroquinate dehydratase/shi... 133 5e-30 tr|B8LLR2|B8LLR2_PICSI Putative uncharacterized protein OS=Picea... 132 6e-30 tr|B4FH30|B4FH30_MAIZE Putative uncharacterized protein OS=Zea m... 131 1e-29 tr|B8BM99|B8BM99_ORYSI Putative uncharacterized protein OS=Oryza... 131 2e-29 tr|O65917|O65917_SOLLC Dehydroquinate dehydratase/shikimate:NADP... 130 2e-29 tr|A7QX09|A7QX09_VITVI Chromosome chr14 scaffold_211, whole geno... 129 7e-29 tr|A5ATW0|A5ATW0_VITVI Putative uncharacterized protein OS=Vitis... 129 7e-29 tr|A9NUR4|A9NUR4_PICSI Putative uncharacterized protein OS=Picea... 129 9e-29 tr|Q0IMW8|Q0IMW8_ORYSJ Os12g0534000 protein (Fragment) OS=Oryza ... 128 2e-28 tr|B6UCV5|B6UCV5_MAIZE Shikimate biosynthesis protein aroDE OS=Z... 127 2e-28 tr|Q5ZCV1|Q5ZCV1_ORYSJ Putative dehydroquinate dehydratase (Puta... 125 8e-28 tr|Q0JMN6|Q0JMN6_ORYSJ Os01g0375200 protein (Fragment) OS=Oryza ... 125 8e-28 tr|B8A8A3|B8A8A3_ORYSI Putative uncharacterized protein OS=Oryza... 125 8e-28 tr|Q5ZCU7|Q5ZCU7_ORYSJ Putative dehydroquinate dehydratase OS=Or... 123 5e-27 tr|A7QX08|A7QX08_VITVI Chromosome chr14 scaffold_211, whole geno... 122 7e-27 tr|A5ATW2|A5ATW2_VITVI Putative uncharacterized protein OS=Vitis... 122 7e-27 tr|B6TSW1|B6TSW1_MAIZE Shikimate dehydrogenase OS=Zea mays PE=2 ... 120 3e-26 tr|B4FAK2|B4FAK2_MAIZE Putative uncharacterized protein OS=Zea m... 120 3e-26 tr|A7QX07|A7QX07_VITVI Chromosome chr14 scaffold_211, whole geno... 120 4e-26 tr|Q6PUF9|Q6PUF9_TOBAC 3-dehydroquinate dehydratase / shikimate ... 119 6e-26 tr|Q42947|Q42947_TOBAC Dehydroquinate dehydratase/shikimate dehy... 119 6e-26 tr|B4FN22|B4FN22_MAIZE Putative uncharacterized protein OS=Zea m... 118 1e-25 tr|A2WQ65|A2WQ65_ORYSI Putative uncharacterized protein OS=Oryza... 118 1e-25 tr|A3CI14|A3CI14_ORYSJ Putative uncharacterized protein OS=Oryza... 116 6e-25 tr|Q0JMN4|Q0JMN4_ORYSJ Os01g0375500 protein OS=Oryza sativa subs... 115 1e-24 tr|A2ZTB4|A2ZTB4_ORYSJ Putative uncharacterized protein OS=Oryza... 115 1e-24 tr|A9S495|A9S495_PHYPA Predicted protein OS=Physcomitrella paten... 114 2e-24 tr|Q6PUG0|Q6PUG0_TOBAC 3-dehydroquinate dehydratase / shikimate ... 111 2e-23
>tr|A7XEE1|A7XEE1_9ROSI 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase (Fragment) OS=Juglans regia PE=2 SV=1 Length = 508
Score = 139 bits (349), Expect = 9e-32 Identities = 69/103 (66%), Positives = 83/103 (80%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 ALSL L+ F P DGM+LAN+TS+GM P + ETPI K ALR YSLVFDAVYTP++TRLL Sbjct: 405 ALSLADLDNFHPEDGMILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTPKMTRLLR 464
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMMAN 310 EAEESGA++V+GLEMFI QA +QF FTG AP++L R +MAN Sbjct: 465 EAEESGAKIVTGLEMFIGQAYEQFERFTGLPAPKELFRKVMAN 507
>tr|A7NW96|A7NW96_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019835001 PE=4 SV=1 Length = 495
Score = 134 bits (337), Expect = 2e-30 Identities = 65/103 (63%), Positives = 82/103 (79%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 ALSL LN F P +GM+LANTTS+GM P + ETPI+K AL+ YSLVFDA+YTP+ITRLL Sbjct: 391 ALSLADLNNFHPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLR 450
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMMAN 310 EA+ESGA +V+GLEMFI QA +QF FTG AP++L + ++N Sbjct: 451 EAQESGATIVTGLEMFIGQAYEQFERFTGLPAPKELFKQFISN 493
>tr|Q30D00|Q30D00_FAGSY Putative 3-dehydroquinate dehydratase/shikimate dehydrogenase OS=Fagus sylvatica PE=2 SV=1 Length = 536
Score = 133 bits (334), Expect = 5e-30 Identities = 66/102 (64%), Positives = 80/102 (78%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 ALSL L F P DGM+LANTTS+GM P + ETPI K ALR YS+VFDAVYTP+ITRLL Sbjct: 433 ALSLADLENFHPEDGMILANTTSIGMQPKVDETPIPKHALRSYSVVFDAVYTPKITRLLR 492
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMMA 307 E+EESGA +V+G+EMFI QA +QF FTG AP++L + +MA Sbjct: 493 ESEESGAIIVTGVEMFIGQAFEQFERFTGLPAPKELFKKIMA 534
>tr|B8LLR2|B8LLR2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 518
Score = 132 bits (333), Expect = 6e-30 Identities = 64/101 (63%), Positives = 85/101 (84%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 A+ L++L+ F+P GM+LANTTS+GM PN+++TPI+K+AL Y++VFDAVYTP+ TRLL Sbjct: 414 AIPLDKLDHFRPETGMILANTTSMGMHPNVSQTPISKEALSSYAVVFDAVYTPKWTRLLQ 473
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMM 304 +AE +GA VV GLEMFIRQA+ QF LFTG APEKLMR+++ Sbjct: 474 DAEATGALVVCGLEMFIRQAMGQFELFTGCKAPEKLMREIV 514
>tr|B4FH30|B4FH30_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 428
Score = 131 bits (330), Expect = 1e-29 Identities = 64/101 (63%), Positives = 80/101 (79%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 AL+L L + P +GM+LANTT++GM PN+ ETP++K ALR Y++VFDAVYTP+ TRLL Sbjct: 324 ALTLADLENYHPEEGMILANTTAIGMHPNVNETPLSKQALRSYAVVFDAVYTPKETRLLR 383
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMM 304 EA E GA VVSGLEMFIRQA+ QF FTG AP+ LMRD++ Sbjct: 384 EAAECGATVVSGLEMFIRQAMGQFEHFTGMPAPDSLMRDIV 424
>tr|B8BM99|B8BM99_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38581 PE=4 SV=1 Length = 531
Score = 131 bits (329), Expect = 2e-29 Identities = 63/101 (62%), Positives = 81/101 (80%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 AL+L +L + P +GM+LANTT++GM PN+ ETP++K AL+ Y++VFDAVYTP+ TRLL Sbjct: 426 ALTLAELENYHPEEGMILANTTAIGMHPNVNETPLSKQALKSYAVVFDAVYTPKETRLLR 485
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMM 304 EA E GA VVSGLEMFIRQA+ QF FTG AP+ LMRD++ Sbjct: 486 EAAECGATVVSGLEMFIRQAMGQFEHFTGMPAPDSLMRDIV 526
>tr|O65917|O65917_SOLLC Dehydroquinate dehydratase/shikimate:NADP oxidoreductase OS=Solanum lycopersicum PE=2 SV=1 Length = 545
Score = 130 bits (328), Expect = 2e-29 Identities = 61/102 (59%), Positives = 86/102 (84%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 ALSL++L+ F P + M+LANTTS+GM P + +TPI+K+AL+ YSLVFDAVYTP+ITRLL Sbjct: 442 ALSLDELSNFHPENDMILANTTSIGMQPKVDDTPISKEALKHYSLVFDAVYTPKITRLLR 501
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMMA 307 EA+ESGA++V+G+EMFI QA +Q+ FTG AP++L +++M+ Sbjct: 502 EAQESGAKIVTGVEMFIGQAYEQYERFTGLPAPKELFKNIMS 543
>tr|A7QX09|A7QX09_VITVI Chromosome chr14 scaffold_211, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008901001 PE=4 SV=1 Length = 490
Score = 129 bits (324), Expect = 7e-29 Identities = 62/101 (61%), Positives = 80/101 (79%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 A++L +L F P DGM+LANTTSVGM PNI TP++K AL +YSLVFDA+YTP++TRLL Sbjct: 386 AMTLAELENFHPEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLR 445
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMM 304 EA+ESGA +V G EMFI QA QF FTG AP++L+R+++ Sbjct: 446 EAQESGAIIVYGTEMFINQAFVQFERFTGLPAPKELIREVL 486
>tr|A5ATW0|A5ATW0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_034024 PE=4 SV=1 Length = 531
Score = 129 bits (324), Expect = 7e-29 Identities = 62/101 (61%), Positives = 80/101 (79%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 A++L +L F P DGM+LANTTSVGM PNI TP++K AL +YSLVFDA+YTP++TRLL Sbjct: 427 AMTLAELENFHPEDGMILANTTSVGMKPNIDNTPLSKKALSRYSLVFDAIYTPKLTRLLR 486
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMM 304 EA+ESGA +V G EMFI QA QF FTG AP++L+R+++ Sbjct: 487 EAQESGAIIVYGTEMFINQAFVQFERFTGLPAPKELIREVL 527
>tr|A9NUR4|A9NUR4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 514
Score = 129 bits (323), Expect = 9e-29 Identities = 64/101 (63%), Positives = 83/101 (82%) Frame = +2
Query: 2 ALSLEQLNTFQPVDGMVLANTTSVGMSPNIAETPIAKDALRKYSLVFDAVYTPRITRLLT 181 A+++EQLN+F+P G VLANT++VGM PN+ TP++K+AL Y+LVFDAVYTPR TRLL Sbjct: 410 AIAVEQLNSFRPETGAVLANTSAVGMQPNVNATPLSKEALGAYTLVFDAVYTPRETRLLR 469
Query: 182 EAEESGAEVVSGLEMFIRQAIKQFSLFTGGSAPEKLMRDMM 304 EA+E+G VVSGLEMFIRQAI Q+ LFTG AP +L+R ++ Sbjct: 470 EAKEAGKIVVSGLEMFIRQAIGQYELFTGKPAPTELIRKIV 510
|