| BP913615 |
| Clone id |
YMU001_000032_C04 |
| Library |
YMU01 |
| Length |
604 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000032_C04. |
| Accession |
BP913615 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
GAGATATTACCTGCAGGTACTCTTCACATTTTCTAATTATAAGGGATGACAAGTCTGTAC
AGTAAGGATTTTGAGTTCTTCATGACTGACCCCGATCTCAAGTATGGAAGAAACCAGGTG
TTAATTGAGAACATTGAGTGAGAGGGGGTGAAAATTGAATAATGATGTCACGTAGTGTGA
CAAGTCCAACCACATGCATGTCTTGATCCACCAGGAAACCTCGGTCGGCGCGAGCCGCAG
TAAGCTTGGCCATGAGTTGCTTCAATGTATCCTCAGAGGTACATGTAACCACCTCGGACA
TCCTTGGCCTCCAACCCCTCTTCAAATGCAAGGCTGCTGCCGATATGATTGCACTCATTT
CCTCCTCATCCTCATCTTGCAAGCCCATTTCATATAATTCCATGTCTACCTTCATTAGTT
CCTCAAGACTCATAGACCTTCTTTCCTCAAATACTTCTGCATTGTCCAGAAGAAGCCGCA
CGTCCGTTGTCCGTATATTTCCTACAATCTTCTTTGTTTCGGAATCAATAATTGGCATGC
CACTTACCCTTTGCTTCCACATGCACATCATTGCCTCTAGAACTGGCTTTTTGCAGTCTA
TATG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q8LBB2 |
| Definition |
sp|Q8LBB2|KING1_ARATH SNF1-related protein kinase regulatory subunit gamma 1 OS=Arabidopsis thaliana |
| Align length |
144 |
| Score (bit) |
74.3 |
| E-value |
4.0e-13 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9RS07 |
| Definition |
tr|A9RS07|A9RS07_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
162 |
| Score (bit) |
116.0 |
| E-value |
9.0e-25 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913615|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_C04.
(604 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9RS07|A9RS07_PHYPA Predicted protein OS=Physcomitrella paten... 116 9e-25
tr|A9U0A9|A9U0A9_PHYPA Predicted protein (Fragment) OS=Physcomit... 105 3e-21
tr|A7P8Y1|A7P8Y1_VITVI Chromosome chr3 scaffold_8, whole genome ... 99 3e-19
tr|Q5VNT2|Q5VNT2_ORYSJ cDNA clone:002-153-F10, full insert seque... 82 2e-14
tr|A2ZVR0|A2ZVR0_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14
tr|A2WSY1|A2WSY1_ORYSI Putative uncharacterized protein OS=Oryza... 82 3e-14
tr|A7PHG8|A7PHG8_VITVI Chromosome chr17 scaffold_16, whole genom... 75 4e-12
tr|A5AH78|A5AH78_VITVI Putative uncharacterized protein OS=Vitis... 75 4e-12
tr|Q8LSN9|Q8LSN9_MAIZE YZ1 OS=Zea mays GN=yz1 PE=4 SV=1 73 1e-11
tr|Q3T7E3|Q3T7E3_ZEAMM YZ1 OS=Zea mays subsp. mexicana GN=yz1 PE... 72 3e-11
tr|Q3T7E1|Q3T7E1_ZEALU YZ1 OS=Zea luxurians GN=yz1 PE=4 SV=1 70 1e-10
tr|Q3T7D9|Q3T7D9_ZEAMP YZ1 OS=Zea mays subsp. parviglumis GN=yz1... 70 1e-10
tr|Q30BI2|Q30BI2_MAIZE YZ1 (Fragment) OS=Zea mays GN=Yz1A PE=4 SV=1 69 2e-10
tr|Q8LSK1|Q8LSK1_MAIZE YZ1 OS=Zea mays GN=yz1 PE=4 SV=1 69 2e-10
tr|Q7XYY0|Q7XYY0_MEDTR AKIN gamma OS=Medicago truncatula PE=2 SV=1 69 3e-10
tr|B7FIY7|B7FIY7_MEDTR Putative uncharacterized protein OS=Medic... 69 3e-10
tr|Q9SBW1|Q9SBW1_ORYSJ Putative transcription factor X2 OS=Oryza... 67 6e-10
tr|B6SHG6|B6SHG6_MAIZE AKIN gamma OS=Zea mays PE=2 SV=1 67 6e-10
tr|Q7XVC0|Q7XVC0_ORYSJ Os04g0382300 protein OS=Oryza sativa subs... 65 2e-09
tr|Q01LJ2|Q01LJ2_ORYSA OSIGBa0092E09.6 protein OS=Oryza sativa G... 65 2e-09
tr|B8AT98|B8AT98_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|A3AT50|A3AT50_ORYSJ Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|Q0JLN6|Q0JLN6_ORYSJ Os01g0586600 protein OS=Oryza sativa subs... 64 5e-09
tr|O48878|O48878_SORBI Gene X-like protein OS=Sorghum bicolor PE... 64 5e-09
tr|B7EGR0|B7EGR0_ORYSJ cDNA clone:J023027C14, full insert sequen... 64 5e-09
tr|A2ZUU7|A2ZUU7_ORYSJ Putative uncharacterized protein OS=Oryza... 64 5e-09
tr|A2WRX6|A2WRX6_ORYSI Putative uncharacterized protein OS=Oryza... 64 5e-09
tr|A9RL36|A9RL36_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-08
tr|B4FX20|B4FX20_MAIZE AKIN gamma OS=Zea mays PE=2 SV=1 62 2e-08
tr|Q8RZI9|Q8RZI9_ORYSJ OJ1485_B09.7 protein (Os01g0921500 protei... 61 6e-08
>tr|A9RS07|A9RS07_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_118489 PE=4 SV=1
Length = 443
Score = 116 bits (291), Expect = 9e-25
Identities = 63/162 (38%), Positives = 96/162 (59%), Gaps = 1/162 (0%)
Frame = -1
Query: 583 VLEAMMCMWKQRVSGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSLEELMKVD 404
++ A+ MWK R+SG+P++D TK+++GNIR D+R++LD EVF R+ M + ++ D
Sbjct: 264 LMTALRAMWKYRISGVPVLDRSTKRLIGNIRYCDLRIILDEPEVFYHRKEMLARDFLQED 323
Query: 403 MELYEMGLQXXXXXXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAKLTAARAD 224
+ + AL L P M + VT +S D++K+ M KL AR+D
Sbjct: 324 GGTHPQ--ETPQPEDFTAAASAAALSLSNIQTPGMQDPVTFSSSDSMKEAMQKLFRARSD 381
Query: 223 RGFLVDQDMHVVGLVTLRDIIIQFSPPLTQCSQL-TPGFFHT 101
RGF+VD + V G+VTLRDI++QFSPP+ + + GFF T
Sbjct: 382 RGFIVDNEGRVKGVVTLRDILMQFSPPVVEPRNMHMGGFFDT 423
>tr|A9U0A9|A9U0A9_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_153726 PE=4 SV=1
Length = 369
Score = 105 bits (261), Expect = 3e-21
Identities = 64/160 (40%), Positives = 96/160 (60%), Gaps = 1/160 (0%)
Frame = -1
Query: 583 VLEAMMCMWKQRVSGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSLEELMKVD 404
++ A+ MWK R+SG+PI+D +K+++GNIR D+ +LL++A+VF +R + ++ +K
Sbjct: 192 LVTALHAMWKYRISGVPILDRPSKRLIGNIRYCDLLILLEDAQVFSKRNELLAQDFLKEH 251
Query: 403 MELYEMGLQ-XXXXXXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAKLTAARA 227
+ LQ AL L P M + VT +S DT+K+ M KL AR+
Sbjct: 252 ADDDGDHLQGTPLQEDFGAAISAAALSLANVKTPPMQDPVTFSSSDTMKEAMQKLFRARS 311
Query: 226 DRGFLVDQDMHVVGLVTLRDIIIQFSPPLTQCSQLTPGFF 107
DRGF+VD M V VTLRDI++QF+PPL + S + GFF
Sbjct: 312 DRGFIVDDWMSV---VTLRDILMQFAPPLAEPSPV-GGFF 347
>tr|A7P8Y1|A7P8Y1_VITVI Chromosome chr3 scaffold_8, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00036350001
PE=4 SV=1
Length = 407
Score = 98.6 bits (244), Expect = 3e-19
Identities = 52/168 (30%), Positives = 88/168 (52%)
Frame = -1
Query: 604 HIDCKKPVLEAMMCMWKQRVSGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSL 425
H+ + + E +WK R + +++ E K+++G++R++D+ LLLDN ++F R++ ++
Sbjct: 224 HVYEDQSIAEGFHVLWKNRTCPIAVLNRENKRLIGSLRSSDIHLLLDNDDLFHGRKTRTI 283
Query: 424 EELMKVDMELYEMGLQXXXXXXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAK 245
EE + +D + L L+ PRM VT DTLKQ M
Sbjct: 284 EEFIHLDAR--KSHADASIEGDLGALVSAGILRLRNSVLPRMDWPVTNRKTDTLKQAMKN 341
Query: 244 LTAARADRGFLVDQDMHVVGLVTLRDIIIQFSPPLTQCSQLTPGFFHT 101
L R++ FLVD+ H+ G++T+RD+I QF+PP GFF +
Sbjct: 342 LAETRSNFSFLVDELQHLTGVLTVRDMITQFAPPCVDSRFTGGGFFES 389
>tr|Q5VNT2|Q5VNT2_ORYSJ cDNA clone:002-153-F10, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0663E10.12 PE=2 SV=1
Length = 407
Score = 82.4 bits (202), Expect = 2e-14
Identities = 49/145 (33%), Positives = 83/145 (57%)
Frame = -1
Query: 577 EAMMCMWKQRVSGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSLEELMKVDME 398
+A+ + K+++ G+ ++D +T ++G+I+ +D+ LLD++ +F R+++S EE +K+ +
Sbjct: 237 DALHILSKEKI-GVAVVDRKTSCLIGSIQCSDLYQLLDDSSLFRNRKTLSAEEFVKLKSK 295
Query: 397 LYEMGLQXXXXXXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAKLTAARADRG 218
++ + L L+ G R VT DTLKQ M KLTA+R+
Sbjct: 296 DEDISTENSSASGGQNV-----LSLRTGQRITAGLPVTNRKSDTLKQAMEKLTASRSSCS 350
Query: 217 FLVDQDMHVVGLVTLRDIIIQFSPP 143
F+VD+ V G+VT RDII FSPP
Sbjct: 351 FIVDEHGRVEGVVTARDIISVFSPP 375
>tr|A2ZVR0|A2ZVR0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_002632 PE=4 SV=1
Length = 395
Score = 82.4 bits (202), Expect = 2e-14
Identities = 49/145 (33%), Positives = 83/145 (57%)
Frame = -1
Query: 577 EAMMCMWKQRVSGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSLEELMKVDME 398
+A+ + K+++ G+ ++D +T ++G+I+ +D+ LLD++ +F R+++S EE +K+ +
Sbjct: 225 DALHILSKEKI-GVAVVDRKTSCLIGSIQCSDLYQLLDDSSLFRNRKTLSAEEFVKLKSK 283
Query: 397 LYEMGLQXXXXXXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAKLTAARADRG 218
++ + L L+ G R VT DTLKQ M KLTA+R+
Sbjct: 284 DEDISTENSSASGGQNV-----LSLRTGQRITAGLPVTNRKSDTLKQAMEKLTASRSSCS 338
Query: 217 FLVDQDMHVVGLVTLRDIIIQFSPP 143
F+VD+ V G+VT RDII FSPP
Sbjct: 339 FIVDEHGRVEGVVTARDIISVFSPP 363
>tr|A2WSY1|A2WSY1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02971 PE=4 SV=1
Length = 437
Score = 81.6 bits (200), Expect = 3e-14
Identities = 49/145 (33%), Positives = 83/145 (57%)
Frame = -1
Query: 577 EAMMCMWKQRVSGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSLEELMKVDME 398
+A+ + K+++ G+ ++D +T ++G+I+ +D+ LLD++ +F R+++S EE +K+ +
Sbjct: 267 DALHILSKEKI-GVAVVDRKTSCLIGSIQCSDLYQLLDDSSLFRNRKTLSAEEFVKLKSK 325
Query: 397 LYEMGLQXXXXXXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAKLTAARADRG 218
++ + L L+ G R VT DTLKQ M KLTA+R+
Sbjct: 326 DEDISTENSSASGGQNV-----LSLRTGQRITAGLPVTNRKSDTLKQAMEKLTASRSRCS 380
Query: 217 FLVDQDMHVVGLVTLRDIIIQFSPP 143
F+VD+ V G+VT RDII FSPP
Sbjct: 381 FIVDEHGRVEGVVTARDIISVFSPP 405
>tr|A7PHG8|A7PHG8_VITVI Chromosome chr17 scaffold_16, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017935001
PE=4 SV=1
Length = 281
Score = 74.7 bits (182), Expect = 4e-12
Identities = 41/143 (28%), Positives = 75/143 (52%)
Frame = -1
Query: 589 KPVLEAMMCMWKQRVSGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSLEELMK 410
+PVL+A M K+ + G+P+++S +K VGNI DV+ LL E++ E RS++ + +
Sbjct: 133 EPVLQAFKLMRKKGIGGIPVVESGGRKAVGNISIRDVQFLLTTPEIYREFRSITAKNFLV 192
Query: 409 VDMELYEMGLQXXXXXXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAKLTAAR 230
+ E + P +S ++TC T+K+++ L + +
Sbjct: 193 AVRKYLEQHNEA---------------------SPMLSGMITCRRNQTVKEMILMLDSVK 231
Query: 229 ADRGFLVDQDMHVVGLVTLRDII 161
R ++VD+D ++ G++TLRDII
Sbjct: 232 IQRVYVVDEDGNLEGVITLRDII 254
>tr|A5AH78|A5AH78_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_010814 PE=4 SV=1
Length = 529
Score = 74.7 bits (182), Expect = 4e-12
Identities = 41/143 (28%), Positives = 75/143 (52%)
Frame = -1
Query: 589 KPVLEAMMCMWKQRVSGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSLEELMK 410
+PVL+A M K+ + G+P+++S +K VGNI DV+ LL E++ E RS++ + +
Sbjct: 282 EPVLQAFKLMRKKGIGGIPVVESGGRKAVGNISIRDVQFLLTTPEIYREFRSITAKNFLV 341
Query: 409 VDMELYEMGLQXXXXXXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAKLTAAR 230
+ E + P +S ++TC T+K+++ L + +
Sbjct: 342 AVRKYLEQHNEA---------------------SPMLSGMITCRRNQTVKEMILMLDSVK 380
Query: 229 ADRGFLVDQDMHVVGLVTLRDII 161
R ++VD+D ++ G++TLRDII
Sbjct: 381 IQRVYVVDEDGNLEGVITLRDII 403
>tr|Q8LSN9|Q8LSN9_MAIZE YZ1 OS=Zea mays GN=yz1 PE=4 SV=1
Length = 406
Score = 73.2 bits (178), Expect = 1e-11
Identities = 44/134 (32%), Positives = 73/134 (54%)
Frame = -1
Query: 544 SGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSLEELMKVDMELYEMGLQXXXX 365
+G+ +ID +T +++G+++ +D+ L LD++ +F +R + +LEEL+ ++ + +
Sbjct: 246 TGVAVIDRKTSRLIGSLQCSDLYLFLDDSTLFSKRTTTTLEELISLNNKTD----RKCST 301
Query: 364 XXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAKLTAARADRGFLVDQDMHVVG 185
L L+ + T DTLKQ M KLTA R+ F+VD+ V G
Sbjct: 302 AENSSAPGRNILALRSRQSGMVGLPATNLESDTLKQAMEKLTALRSSCSFIVDEHGRVQG 361
Query: 184 LVTLRDIIIQFSPP 143
+VT RDII FSPP
Sbjct: 362 VVTTRDIISVFSPP 375
>tr|Q3T7E3|Q3T7E3_ZEAMM YZ1 OS=Zea mays subsp. mexicana GN=yz1 PE=4
SV=1
Length = 407
Score = 71.6 bits (174), Expect = 3e-11
Identities = 43/134 (32%), Positives = 72/134 (53%)
Frame = -1
Query: 544 SGMPIIDSETKKIVGNIRTTDVRLLLDNAEVFEERRSMSLEELMKVDMELYEMGLQXXXX 365
+G+ +ID +T +++G+++ +D+ L LD++ +F +R + +LEEL+ ++ + +
Sbjct: 247 TGVAVIDRKTSRLIGSLQCSDLYLFLDDSTLFSKRTTTTLEELISLNNKTD----RKCST 302
Query: 364 XXXXXXXXXXALHLKRGWRPRMSEVVTCTSEDTLKQLMAKLTAARADRGFLVDQDMHVVG 185
L L+ + T DTLKQ M KLT R+ F+VD+ V G
Sbjct: 303 AENSCAPGRNILALRSRQSGMVGLPATNLESDTLKQAMEKLTTLRSSCSFIVDEHGRVQG 362
Query: 184 LVTLRDIIIQFSPP 143
+VT RDII FSPP
Sbjct: 363 VVTTRDIISVFSPP 376
|