BP913616 |
Clone id |
YMU001_000032_C05 |
Library |
YMU01 |
Length |
545 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000032_C05. |
Accession |
BP913616 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AACTAATGGTGGGGGGACTAGGGACCCGACTGGCTCTAGCTTCCCCCTCCAAAGAGTGAA GTAATTGTTTAGTGCCGATGATGATCTTTGAAAGTTGCATTATAATTCTTTAAGCAAAGA GGAGATTGTTTTAGATCTCTATCGAGGAATTCTAGACATCTCTATTGAGGGACTGACTAG TGATGGGGAAGGATGAGCAACGACAGCAGCCCAGGTCTTGGAGGAGAAGAACGTGAGGGA GACAGGCGAACACTAATTAAAGCGCAGGCCGGAGGCGCTCATATAAAAGTGGCCTACATG TGATCATCACCATGGCCGCAAGGGCTGCAGCTTTGAAGTAAAGAGGATGCGCAAGTGGCT GTGGTCGCCCGAGGAGGACGACGCCCTGCGCTGCTTTGTGGAGAGGCACAGCTGCGGCAA ATGGAGTCACGTCGCTCTCCTCACCGGTAGGGTAGCCTCCTCTCTCTCTCTCTCTGTGGG TGTCTGTGCCCAGACTTGGGAAACAAACAAGAGGAGAGGTCTGCTTAGTTTTCTGGCTAT TCACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LPH6 |
Definition |
sp|Q8LPH6|MYB86_ARATH Transcription factor MYB86 OS=Arabidopsis thaliana |
Align length |
45 |
Score (bit) |
47.4 |
E-value |
5.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PF83 |
Definition |
tr|A7PF83|A7PF83_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
66 |
Score (bit) |
46.6 |
E-value |
0.0009 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913616|Adiantum capillus-veneris mRNA, clone: YMU001_000032_C05. (545 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PF83|A7PF83_VITVI Chromosome chr11 scaffold_13, whole genom... 47 9e-04 tr|Q2HRU1|Q2HRU1_MEDTR Homeodomain-related OS=Medicago truncatul... 45 0.003 tr|Q0PJD6|Q0PJD6_SOYBN MYB transcription factor MYB160 (Fragment... 45 0.003 tr|B6SKQ4|B6SKQ4_MAIZE MYB2 OS=Zea mays PE=2 SV=1 44 0.004 tr|B4FPW7|B4FPW7_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.004 tr|Q688D6|Q688D6_ORYSJ Os05g0140100 protein OS=Oryza sativa subs... 44 0.006 tr|B4FMX8|B4FMX8_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.006 tr|A2Y082|A2Y082_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.006 tr|Q9SAV9|Q9SAV9_ARATH F14J9.20 protein OS=Arabidopsis thaliana ... 44 0.007 tr|Q9AQV2|Q9AQV2_ORYSJ cDNA clone:J013087D08, full insert sequen... 44 0.007 tr|Q8VZQ2|Q8VZQ2_ARATH Putative transcription factor (MYB transc... 44 0.007 tr|Q7XML0|Q7XML0_ORYSJ Os04g0532800 protein OS=Oryza sativa subs... 44 0.007 tr|Q5NKI1|Q5NKI1_ORYSJ MYB18 protein OS=Oryza sativa subsp. japo... 44 0.007 tr|B4FF63|B4FF63_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.007 tr|A3AVV3|A3AVV3_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.007 tr|A2XVU6|A2XVU6_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.007 tr|A2WNL4|A2WNL4_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.007 tr|Q6Z7B6|Q6Z7B6_ORYSJ Os02g0114800 protein OS=Oryza sativa subs... 43 0.010 tr|A2ZWZ3|A2ZWZ3_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.010 tr|A2X032|A2X032_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.010 tr|A2WU70|A2WU70_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.010 tr|Q9C695|Q9C695_ARATH DNA-binding protein, putative (At1g57560)... 43 0.012 tr|A2X7P2|A2X7P2_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.012 tr|Q6H7C6|Q6H7C6_ORYSJ ATMYB4-like protein OS=Oryza sativa subsp... 42 0.016 tr|B8AW85|B8AW85_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.016 tr|A7PCT7|A7PCT7_VITVI Chromosome chr17 scaffold_12, whole genom... 42 0.016 tr|A7PRH1|A7PRH1_VITVI Chromosome chr14 scaffold_27, whole genom... 42 0.021 tr|A7P2M2|A7P2M2_VITVI Chromosome chr1 scaffold_5, whole genome ... 42 0.021 tr|A5C8P8|A5C8P8_VITVI Putative uncharacterized protein OS=Vitis... 42 0.021 tr|A9RRX2|A9RRX2_PHYPA Predicted protein (Fragment) OS=Physcomit... 42 0.028
>tr|A7PF83|A7PF83_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016947001 PE=4 SV=1 Length = 269
Score = 46.6 bits (109), Expect = 9e-04 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 4/66 (6%) Frame = +2
Query: 344 RMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTGRVASSLSLSVGVCAQTWET----NK 511 R++K LW PEED L+ +VE H GKW V+ TG + S S C W+ NK Sbjct: 58 RVKKGLWKPEEDLLLKKYVEAHGEGKWDAVSERTGLMRSGKS-----CRLRWKNYLRPNK 112
Query: 512 RRGLLS 529 +RG +S Sbjct: 113 KRGGIS 118
>tr|Q2HRU1|Q2HRU1_MEDTR Homeodomain-related OS=Medicago truncatula GN=MtrDRAFT_AC157894g4v2 PE=4 SV=1 Length = 381
Score = 45.1 bits (105), Expect = 0.003 Identities = 21/45 (46%), Positives = 28/45 (62%) Frame = +2
Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448 GR C ++ K +RK LWSPEED+ L ++ +H G WS V L G Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAG 45
>tr|Q0PJD6|Q0PJD6_SOYBN MYB transcription factor MYB160 (Fragment) OS=Glycine max GN=MYB160 PE=2 SV=1 Length = 193
Score = 45.1 bits (105), Expect = 0.003 Identities = 21/45 (46%), Positives = 28/45 (62%) Frame = +2
Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448 GR C ++ K +RK LWSPEED+ L ++ +H G WS V L G Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAG 45
>tr|B6SKQ4|B6SKQ4_MAIZE MYB2 OS=Zea mays PE=2 SV=1 Length = 427
Score = 44.3 bits (103), Expect = 0.004 Identities = 21/45 (46%), Positives = 27/45 (60%) Frame = +2
Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448 GR C ++ K +RK LWSPEED+ L + +H G WS V L G Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMIHITKHGHGCWSTVPKLAG 45
>tr|B4FPW7|B4FPW7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 271
Score = 44.3 bits (103), Expect = 0.004 Identities = 21/45 (46%), Positives = 25/45 (55%) Frame = +2
Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448 GR C ++RK LWSPEED+ L + RH G WS V L G Sbjct: 2 GRLSCGGVQPKLRKGLWSPEEDERLYGHIIRHGVGCWSSVPKLAG 46
>tr|Q688D6|Q688D6_ORYSJ Os05g0140100 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0111O13.9 PE=2 SV=1 Length = 427
Score = 43.9 bits (102), Expect = 0.006 Identities = 21/45 (46%), Positives = 27/45 (60%) Frame = +2
Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448 GR C ++ K +RK LWSPEED+ L + +H G WS V L G Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 45
>tr|B4FMX8|B4FMX8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 426
Score = 43.9 bits (102), Expect = 0.006 Identities = 21/45 (46%), Positives = 27/45 (60%) Frame = +2
Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448 GR C ++ K +RK LWSPEED+ L + +H G WS V L G Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 45
>tr|A2Y082|A2Y082_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_18393 PE=4 SV=1 Length = 427
Score = 43.9 bits (102), Expect = 0.006 Identities = 21/45 (46%), Positives = 27/45 (60%) Frame = +2
Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448 GR C ++ K +RK LWSPEED+ L + +H G WS V L G Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 45
>tr|Q9SAV9|Q9SAV9_ARATH F14J9.20 protein OS=Arabidopsis thaliana GN=F14J9.20 PE=4 SV=1 Length = 414
Score = 43.5 bits (101), Expect = 0.007 Identities = 21/45 (46%), Positives = 26/45 (57%) Frame = +2
Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448 GR C ++ K +RK LWSPEED+ L + H G WS V L G Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAG 45
>tr|Q9AQV2|Q9AQV2_ORYSJ cDNA clone:J013087D08, full insert sequence OS=Oryza sativa subsp. japonica GN=P0498A12.22 PE=2 SV=1 Length = 428
Score = 43.5 bits (101), Expect = 0.007 Identities = 21/45 (46%), Positives = 27/45 (60%) Frame = +2
Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448 GR C ++ K +RK LWSPEED+ L + +H G WS V L G Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMNHITKHGHGCWSTVPKLAG 45
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