BP913616
Clone id YMU001_000032_C05
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AACTAATGGTGGGGGGACTAGGGACCCGACTGGCTCTAGCTTCCCCCTCCAAAGAGTGAA
GTAATTGTTTAGTGCCGATGATGATCTTTGAAAGTTGCATTATAATTCTTTAAGCAAAGA
GGAGATTGTTTTAGATCTCTATCGAGGAATTCTAGACATCTCTATTGAGGGACTGACTAG
TGATGGGGAAGGATGAGCAACGACAGCAGCCCAGGTCTTGGAGGAGAAGAACGTGAGGGA
GACAGGCGAACACTAATTAAAGCGCAGGCCGGAGGCGCTCATATAAAAGTGGCCTACATG
TGATCATCACCATGGCCGCAAGGGCTGCAGCTTTGAAGTAAAGAGGATGCGCAAGTGGCT
GTGGTCGCCCGAGGAGGACGACGCCCTGCGCTGCTTTGTGGAGAGGCACAGCTGCGGCAA
ATGGAGTCACGTCGCTCTCCTCACCGGTAGGGTAGCCTCCTCTCTCTCTCTCTCTGTGGG
TGTCTGTGCCCAGACTTGGGAAACAAACAAGAGGAGAGGTCTGCTTAGTTTTCTGGCTAT
TCACA
■■Homology search results ■■ -
sp_hit_id Q8LPH6
Definition sp|Q8LPH6|MYB86_ARATH Transcription factor MYB86 OS=Arabidopsis thaliana
Align length 45
Score (bit) 47.4
E-value 5.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913616|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_C05.
(545 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8LPH6|MYB86_ARATH Transcription factor MYB86 OS=Arabidopsis ... 47 5e-05
sp|Q9LXV2|MYB46_ARATH Transcription factor MYB46 OS=Arabidopsis ... 39 0.021
sp|Q8GWP0|MYB39_ARATH Transcription factor MYB39 OS=Arabidopsis ... 38 0.028
sp|Q9M0K4|LAF1_ARATH Transcription factor LAF1 OS=Arabidopsis th... 38 0.028
sp|P10290|MYBC_MAIZE Anthocyanin regulatory C1 protein OS=Zea ma... 38 0.036
sp|P20027|MYB3_HORVU Myb-related protein Hv33 OS=Hordeum vulgare... 38 0.036
sp|Q9S7L2|MYB98_ARATH Transcription factor MYB98 OS=Arabidopsis ... 37 0.047
sp|Q9LTF7|MYB82_ARATH Transcription factor MYB82 OS=Arabidopsis ... 37 0.062
sp|Q9ZTC3|MYB90_ARATH Transcription factor MYB90 OS=Arabidopsis ... 36 0.14
sp|P81392|MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum maj... 36 0.14
sp|Q9FNV9|MY113_ARATH Transcription factor MYB113 OS=Arabidopsis... 36 0.14
sp|P52551|MYBB_XENLA Myb-related protein B OS=Xenopus laevis GN=... 35 0.31
sp|P27900|GL1_ARATH Trichome differentiation protein GL1 OS=Arab... 34 0.40
sp|Q947R4|GL1_ARALY Trichome differentiation protein GL1 OS=Arab... 34 0.40
sp|Q9SEI0|WER_ARATH Transcription factor WER OS=Arabidopsis thal... 34 0.52
sp|Q9S7B2|RS2_MAIZE Protein rough sheath 2 OS=Zea mays GN=RS2 PE... 33 0.68
sp|Q96276|MYB23_ARATH Transcription factor MYB23 OS=Arabidopsis ... 33 0.68
sp|Q9FNV8|MY114_ARATH Transcription factor MYB114 OS=Arabidopsis... 33 0.68
sp|Q9FE25|MYB75_ARATH Transcription factor MYB75 OS=Arabidopsis ... 33 0.89
sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa su... 33 0.89
sp|Q9FG68|RAX1_ARATH Transcription factor RAX1 OS=Arabidopsis th... 32 2.0
sp|P70371|TERF1_MOUSE Telomeric repeat-binding factor 1 OS=Mus m... 32 2.6
sp|Q94IB1|RS2_ORYSJ Protein rough sheath 2 homolog OS=Oryza sati... 32 2.6
sp|Q8VCC8|RPGF3_MOUSE Rap guanine nucleotide exchange factor 3 O... 32 2.6
sp|B0G0Y5|MYBAA_DICDI Myb-like protein AA OS=Dictyostelium disco... 31 3.4
sp|P81396|MYB40_ANTMA Myb-related protein 340 OS=Antirrhinum maj... 31 3.4
sp|P20026|MYB1_HORVU Myb-related protein Hv1 OS=Hordeum vulgare ... 31 3.4
sp|Q756C3|CEF1_ASHGO Pre-mRNA-splicing factor CEF1 OS=Ashbya gos... 31 3.4
sp|Q9BRP0|OVOL2_HUMAN Transcription factor Ovo-like 2 OS=Homo sa... 31 4.4
sp|Q9SM27|MY104_ARATH Transcription factor MYB104 OS=Arabidopsis... 31 4.4

>sp|Q8LPH6|MYB86_ARATH Transcription factor MYB86 OS=Arabidopsis
thaliana GN=MYB86 PE=2 SV=1
Length = 352

Score = 47.4 bits (111), Expect = 5e-05
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C F+ K +RK LWSPEED+ L ++ RH G WS V L G
Sbjct: 2 GRHSCCFKQK-LRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAG 45


>sp|Q9LXV2|MYB46_ARATH Transcription factor MYB46 OS=Arabidopsis
thaliana GN=MYB46 PE=2 SV=1
Length = 280

Score = 38.5 bits (88), Expect = 0.021
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2

Query: 335 EVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
+VK+M+K LWSPEED L ++ + G WS VA G
Sbjct: 14 QVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAG 51


>sp|Q8GWP0|MYB39_ARATH Transcription factor MYB39 OS=Arabidopsis
thaliana GN=MYB39 PE=2 SV=1
Length = 360

Score = 38.1 bits (87), Expect = 0.028
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C + K ++K W PEEDD L ++ + G W + L G
Sbjct: 2 GRSPCCDQDKGVKKGPWLPEEDDKLTAYINENGYGNWRSLPKLAG 46


>sp|Q9M0K4|LAF1_ARATH Transcription factor LAF1 OS=Arabidopsis
thaliana GN=LAF1 PE=1 SV=2
Length = 283

Score = 38.1 bits (87), Expect = 0.028
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +2

Query: 341 KRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTGRVASSLSLSVGVCAQTWETNKRRG 520
+R RK LWSPEED+ LR F+ + W+ V + G + S C W R G
Sbjct: 8 ERHRKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKS-----CRLRWINYLRPG 62

Query: 521 L 523
L
Sbjct: 63 L 63


>sp|P10290|MYBC_MAIZE Anthocyanin regulatory C1 protein OS=Zea mays
GN=C1 PE=2 SV=1
Length = 273

Score = 37.7 bits (86), Expect = 0.036
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTGRVASSLSLSVGVCAQ 493
GR+ C + + +++ W+ +EDDAL +V+ H GKW V G S C
Sbjct: 2 GRRACCAK-EGVKRGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKS-----CRL 55

Query: 494 TW----ETNKRRGLLSF 532
W N RRG +S+
Sbjct: 56 RWLNYLRPNIRRGNISY 72


>sp|P20027|MYB3_HORVU Myb-related protein Hv33 OS=Hordeum vulgare
GN=MYB2 PE=2 SV=3
Length = 302

Score = 37.7 bits (86), Expect = 0.036
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2

Query: 344 RMRKWLWSPEEDDALRCFVERHSCGKWSHVALL 442
++RK LWSPEED+ L + RH G WS V L
Sbjct: 13 KVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRL 45


>sp|Q9S7L2|MYB98_ARATH Transcription factor MYB98 OS=Arabidopsis
thaliana GN=MYB98 PE=2 SV=1
Length = 427

Score = 37.4 bits (85), Expect = 0.047
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = +2

Query: 353 KWLWSPEEDDALRCFVERHSCGKWSHVA-LLTGRVASSL------SLSVGVCAQTWETNK 511
K W+ EED L VE++ KWSH+A +L GR+ L + +TW +
Sbjct: 217 KGQWTAEEDRVLIQLVEKYGLRKWSHIAQVLPGRIGKQCRERWHNHLRPDIKKETWSEEE 276

Query: 512 RRGLLSF 532
R L+ F
Sbjct: 277 DRVLIEF 283


>sp|Q9LTF7|MYB82_ARATH Transcription factor MYB82 OS=Arabidopsis
thaliana GN=MYB82 PE=1 SV=1
Length = 201

Score = 37.0 bits (84), Expect = 0.062
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = +2

Query: 347 MRKWLWSPEEDDALRCFVERHSCGKWSHVALLTGRVASSLSLSVGVCAQTWET----NKR 514
+++ LW PEED L+ +VE H G W+ ++ +G S C W+ N +
Sbjct: 12 VKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKS-----CRLRWKNYLRPNIK 66

Query: 515 RGLLS 529
RG +S
Sbjct: 67 RGSMS 71


>sp|Q9ZTC3|MYB90_ARATH Transcription factor MYB90 OS=Arabidopsis
thaliana GN=MYB90 PE=1 SV=1
Length = 249

Score = 35.8 bits (81), Expect = 0.14
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2

Query: 341 KRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
K +RK W+ EED LR ++++ GKW V L G
Sbjct: 6 KGLRKGAWTAEEDSLLRLCIDKYGEGKWHQVPLRAG 41


>sp|P81392|MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum majus
GN=MYB306 PE=2 SV=1
Length = 316

Score = 35.8 bits (81), Expect = 0.14
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTGRVASSLSLSVGVCAQ 493
GR C ++ ++K W+PEED L +++ H G W + TG + S S C
Sbjct: 2 GRPPCCDKIG-VKKGPWTPEEDIILVSYIQEHGPGNWRAIPSNTGLLRCSKS-----CRL 55

Query: 494 TWETNKRRGL 523
W R G+
Sbjct: 56 RWTNYLRPGI 65


tr_hit_id A7PF83
Definition tr|A7PF83|A7PF83_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera
Align length 66
Score (bit) 46.6
E-value 0.0009
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913616|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_C05.
(545 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PF83|A7PF83_VITVI Chromosome chr11 scaffold_13, whole genom... 47 9e-04
tr|Q2HRU1|Q2HRU1_MEDTR Homeodomain-related OS=Medicago truncatul... 45 0.003
tr|Q0PJD6|Q0PJD6_SOYBN MYB transcription factor MYB160 (Fragment... 45 0.003
tr|B6SKQ4|B6SKQ4_MAIZE MYB2 OS=Zea mays PE=2 SV=1 44 0.004
tr|B4FPW7|B4FPW7_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.004
tr|Q688D6|Q688D6_ORYSJ Os05g0140100 protein OS=Oryza sativa subs... 44 0.006
tr|B4FMX8|B4FMX8_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.006
tr|A2Y082|A2Y082_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.006
tr|Q9SAV9|Q9SAV9_ARATH F14J9.20 protein OS=Arabidopsis thaliana ... 44 0.007
tr|Q9AQV2|Q9AQV2_ORYSJ cDNA clone:J013087D08, full insert sequen... 44 0.007
tr|Q8VZQ2|Q8VZQ2_ARATH Putative transcription factor (MYB transc... 44 0.007
tr|Q7XML0|Q7XML0_ORYSJ Os04g0532800 protein OS=Oryza sativa subs... 44 0.007
tr|Q5NKI1|Q5NKI1_ORYSJ MYB18 protein OS=Oryza sativa subsp. japo... 44 0.007
tr|B4FF63|B4FF63_MAIZE Putative uncharacterized protein OS=Zea m... 44 0.007
tr|A3AVV3|A3AVV3_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.007
tr|A2XVU6|A2XVU6_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.007
tr|A2WNL4|A2WNL4_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.007
tr|Q6Z7B6|Q6Z7B6_ORYSJ Os02g0114800 protein OS=Oryza sativa subs... 43 0.010
tr|A2ZWZ3|A2ZWZ3_ORYSJ Putative uncharacterized protein OS=Oryza... 43 0.010
tr|A2X032|A2X032_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.010
tr|A2WU70|A2WU70_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.010
tr|Q9C695|Q9C695_ARATH DNA-binding protein, putative (At1g57560)... 43 0.012
tr|A2X7P2|A2X7P2_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.012
tr|Q6H7C6|Q6H7C6_ORYSJ ATMYB4-like protein OS=Oryza sativa subsp... 42 0.016
tr|B8AW85|B8AW85_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.016
tr|A7PCT7|A7PCT7_VITVI Chromosome chr17 scaffold_12, whole genom... 42 0.016
tr|A7PRH1|A7PRH1_VITVI Chromosome chr14 scaffold_27, whole genom... 42 0.021
tr|A7P2M2|A7P2M2_VITVI Chromosome chr1 scaffold_5, whole genome ... 42 0.021
tr|A5C8P8|A5C8P8_VITVI Putative uncharacterized protein OS=Vitis... 42 0.021
tr|A9RRX2|A9RRX2_PHYPA Predicted protein (Fragment) OS=Physcomit... 42 0.028

>tr|A7PF83|A7PF83_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016947001
PE=4 SV=1
Length = 269

Score = 46.6 bits (109), Expect = 9e-04
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2

Query: 344 RMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTGRVASSLSLSVGVCAQTWET----NK 511
R++K LW PEED L+ +VE H GKW V+ TG + S S C W+ NK
Sbjct: 58 RVKKGLWKPEEDLLLKKYVEAHGEGKWDAVSERTGLMRSGKS-----CRLRWKNYLRPNK 112

Query: 512 RRGLLS 529
+RG +S
Sbjct: 113 KRGGIS 118


>tr|Q2HRU1|Q2HRU1_MEDTR Homeodomain-related OS=Medicago truncatula
GN=MtrDRAFT_AC157894g4v2 PE=4 SV=1
Length = 381

Score = 45.1 bits (105), Expect = 0.003
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C ++ K +RK LWSPEED+ L ++ +H G WS V L G
Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAG 45


>tr|Q0PJD6|Q0PJD6_SOYBN MYB transcription factor MYB160 (Fragment)
OS=Glycine max GN=MYB160 PE=2 SV=1
Length = 193

Score = 45.1 bits (105), Expect = 0.003
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C ++ K +RK LWSPEED+ L ++ +H G WS V L G
Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAG 45


>tr|B6SKQ4|B6SKQ4_MAIZE MYB2 OS=Zea mays PE=2 SV=1
Length = 427

Score = 44.3 bits (103), Expect = 0.004
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C ++ K +RK LWSPEED+ L + +H G WS V L G
Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMIHITKHGHGCWSTVPKLAG 45


>tr|B4FPW7|B4FPW7_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 271

Score = 44.3 bits (103), Expect = 0.004
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C ++RK LWSPEED+ L + RH G WS V L G
Sbjct: 2 GRLSCGGVQPKLRKGLWSPEEDERLYGHIIRHGVGCWSSVPKLAG 46


>tr|Q688D6|Q688D6_ORYSJ Os05g0140100 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0111O13.9 PE=2 SV=1
Length = 427

Score = 43.9 bits (102), Expect = 0.006
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C ++ K +RK LWSPEED+ L + +H G WS V L G
Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 45


>tr|B4FMX8|B4FMX8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 426

Score = 43.9 bits (102), Expect = 0.006
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C ++ K +RK LWSPEED+ L + +H G WS V L G
Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 45


>tr|A2Y082|A2Y082_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_18393 PE=4 SV=1
Length = 427

Score = 43.9 bits (102), Expect = 0.006
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C ++ K +RK LWSPEED+ L + +H G WS V L G
Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMNHITKHGHGCWSSVPKLAG 45


>tr|Q9SAV9|Q9SAV9_ARATH F14J9.20 protein OS=Arabidopsis thaliana
GN=F14J9.20 PE=4 SV=1
Length = 414

Score = 43.5 bits (101), Expect = 0.007
Identities = 21/45 (46%), Positives = 26/45 (57%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C ++ K +RK LWSPEED+ L + H G WS V L G
Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAG 45


>tr|Q9AQV2|Q9AQV2_ORYSJ cDNA clone:J013087D08, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0498A12.22 PE=2 SV=1
Length = 428

Score = 43.5 bits (101), Expect = 0.007
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2

Query: 314 GRKGCSFEVKRMRKWLWSPEEDDALRCFVERHSCGKWSHVALLTG 448
GR C ++ K +RK LWSPEED+ L + +H G WS V L G
Sbjct: 2 GRHSCCYKQK-LRKGLWSPEEDEKLMNHITKHGHGCWSTVPKLAG 45