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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913625
Clone id YMU001_000032_D03
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGCAGCCCCAGATAGAGCTCGAGGAGAGATTACCAGATCGAGATTGAGAGGAGTAGTTGG
ACAGAGGGATAGAGCATGAGGACCAGCAGTGGATGGTAACTCAGGAGCAGCTTGAGTTGC
CCCAGGATAGGCGAGTGAAGTAGGTTTTGGATCTCTTGGAGATTTAGTCACAAGTGCCCC
TTATAGTAGGCACTTTTGAGGGGGAGTAGGAGAGTGAGTCTTCTCAATCTGCAGGGGATT
TTAACTATTCCGCAGGTTTTACATCACAAGCAAATGTCCCGTTATCAAAGATTTTGCCTG
CAGAGTTCTTTGTGTTGGTCCATGGAGATTTCTAGATGCCTCTTTGAGAAGTGGGCCACT
ATGTGTCAACATCATTTTAGTGCAGTTTTTAGGTACACACCACATTTTCCTTGGTCCAAA
GAGAGCTCCCATGATCAGATTCAAAGTCCAGGCAGGTTTTACATGAGGACTCCTTTTGGA
CGAGGGAGGCTGTTTAAGCTATTATACAAGAGCAGACAATGGTTAAGATCAACTACTTTA
TGGATATCAGATGAC
■■Homology search results ■■ -
sp_hit_id Q16512
Definition sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo sapiens
Align length 49
Score (bit) 32.7
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913625|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_D03.
         (555 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo ...    33   1.2  
sp|A4IFD2|FOXP1_BOVIN Forkhead box protein P1 OS=Bos taurus GN=F...    33   1.2  
sp|Q6C414|SEC31_YARLI Protein transport protein SEC31 OS=Yarrowi...    31   4.7  
sp|Q92954|PRG4_HUMAN Proteoglycan 4 OS=Homo sapiens GN=PRG4 PE=1...    31   4.7  
sp|P56477|IRF5_MOUSE Interferon regulatory factor 5 OS=Mus muscu...    31   4.7  
sp|Q8MSX1|ENC_DROME Protein encore OS=Drosophila melanogaster GN...    30   8.0  

>sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo
           sapiens GN=PKN1 PE=1 SV=1
          Length = 942

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
 Frame = -1

Query: 165 KSPRDP--KPTSLAYPGATQAAPELPS----TAGPHALSLCPTTPLNLD 37
           KS RDP   P+SL+ P     APELPS    T GP   S    +PL L+
Sbjct: 565 KSSRDPPSSPSSLSSPIQESTAPELPSETQETPGPALCSPLRKSPLTLE 613


>sp|A4IFD2|FOXP1_BOVIN Forkhead box protein P1 OS=Bos taurus
           GN=FOXP1 PE=2 SV=1
          Length = 674

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 234 LQIEKTHSPTPPQKC-LL*GALVTKSPRDPKPTSLAYPGATQAAPELPSTAGPHALS 67
           L ++ T   T PQ   L+    ++KS  +  P SL +   T  AP  P+T GP  ++
Sbjct: 367 LHVKSTEPKTAPQPLNLVSSVTLSKSASEASPQSLPHTPTTPTAPITPATQGPSVIT 423


>sp|Q6C414|SEC31_YARLI Protein transport protein SEC31 OS=Yarrowia
           lipolytica GN=SEC31 PE=3 SV=1
          Length = 1184

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 20/53 (37%), Positives = 23/53 (43%)
 Frame = -1

Query: 165 KSPRDPKPTSLAYPGATQAAPELPSTAGPHALSLCPTTPLNLDLVISPRALSG 7
           KS   P P S AY   T AAP  P   GP         P +++ V SP   SG
Sbjct: 857 KSAPSPGPISSAYAPPTPAAPSAPPAGGPR--------PPSVNRVTSPGVPSG 901


>sp|Q92954|PRG4_HUMAN Proteoglycan 4 OS=Homo sapiens GN=PRG4 PE=1
           SV=2
          Length = 1404

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
 Frame = -1

Query: 210 PTPPQKCLL*GALVTKSPRDPKPTSLAYPGAT----------QAAPELPSTAGPHALSLC 61
           PTP  +    G  +T +P++P PT+   P +T          ++AP  P    P      
Sbjct: 331 PTPKAETTTKGPALT-TPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSA 389

Query: 60  PTTP 49
           PTTP
Sbjct: 390 PTTP 393


>sp|P56477|IRF5_MOUSE Interferon regulatory factor 5 OS=Mus musculus
           GN=Irf5 PE=2 SV=1
          Length = 497

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 24/54 (44%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = -1

Query: 159 PRDPKPTSLAYP-----GATQAAPELPSTAGPHALSLCPTTPLNLDLVISPRAL 13
           P  P P  LA P     G  Q  PE+    GP A S  PT PL  DL+ISP  L
Sbjct: 192 PPVPDPNLLAPPSGNPAGFRQLLPEVLEP-GPLASSQPPTEPLLPDLLISPHML 244


>sp|Q8MSX1|ENC_DROME Protein encore OS=Drosophila melanogaster GN=enc
            PE=1 SV=2
          Length = 1818

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = -1

Query: 213  SPTPPQKCLL*GALVTKSPRDPKPTSLAYPGATQAAPELPSTAGPHA-LSLCPTTPLN 43
            +P PP +     AL+T +P  P        GA+Q+AP  P+  G  A L   P  P N
Sbjct: 1350 APPPPPQSAPHHALITAAPFYPANGGNMDQGASQSAPSTPAAPGRQAPLFSTPPAPNN 1407
tr_hit_id B4KR81
Definition tr|B4KR81|B4KR81_DROMO GI19874 OS=Drosophila mojavensis
Align length 74
Score (bit) 37.0
E-value 0.72
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913625|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_D03.
         (555 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4KR81|B4KR81_DROMO GI19874 OS=Drosophila mojavensis GN=GI198...    37   0.72 
tr|B2R9R4|B2R9R4_HUMAN cDNA, FLJ94521, highly similar to Homo sa...    35   2.7  
tr|Q67WZ0|Q67WZ0_ORYSJ Putative uncharacterized protein OSJNBa00...    34   6.1  
tr|A8JFD4|A8JFD4_CHLRE Glyoxal or galactose oxidase (Fragment) O...    34   6.1  
tr|B6KPE2|B6KPE2_TOXGO Putative uncharacterized protein OS=Toxop...    34   6.1  
tr|Q4RTZ8|Q4RTZ8_TETNG Chromosome 12 SCAF14996, whole genome sho...    33   7.9  
tr|A2ZAP9|A2ZAP9_ORYSI Putative uncharacterized protein OS=Oryza...    33   7.9  

>tr|B4KR81|B4KR81_DROMO GI19874 OS=Drosophila mojavensis GN=GI19874
           PE=4 SV=1
          Length = 689

 Score = 37.0 bits (84), Expect = 0.72
 Identities = 26/74 (35%), Positives = 32/74 (43%)
 Frame = -1

Query: 489 PPSSKRSPHVKPAWTLNLIMGALFGPRKMWCVPKNCTKMMLTHSGPLLKEASRNLHGPTQ 310
           PP S  SP   P+  L L   A     K+ CVP+NCT   L  + PL+ E        +Q
Sbjct: 505 PPPSTSSPATLPSHLLELNTFAEMPLEKLSCVPRNCT--FLLSANPLIVE--------SQ 554

Query: 309 RTLQAKSLITGHLL 268
                  L  GHLL
Sbjct: 555 ELASTMQLAPGHLL 568


>tr|B2R9R4|B2R9R4_HUMAN cDNA, FLJ94521, highly similar to Homo
           sapiens protein kinase C-like 1 (PRKCL1), mRNA OS=Homo
           sapiens PE=2 SV=1
          Length = 942

 Score = 35.0 bits (79), Expect = 2.7
 Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = -1

Query: 219 THSPTPPQKCLL*GALVTKSPRDP--KPTSLAYPGATQAAPELPS----TAGPHALSLCP 58
           T S +PPQK          S RDP   P+SL+ P     APELPS    T GP   S   
Sbjct: 557 TDSDSPPQK----------SSRDPPSSPSSLSSPIQESTAPELPSETQETPGPALCSPLR 606

Query: 57  TTPLNLD 37
            +PL L+
Sbjct: 607 KSPLTLE 613


>tr|Q67WZ0|Q67WZ0_ORYSJ Putative uncharacterized protein
           OSJNBa0062J02.22 OS=Oryza sativa subsp. japonica
           GN=OSJNBa0062J02.22 PE=4 SV=1
          Length = 274

 Score = 33.9 bits (76), Expect = 6.1
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -1

Query: 165 KSPRDPKPTSLAYPGATQAA---PELPSTAGPHALSLCPTTPLNLDLVISPRALS 10
           K+P    P   AY  AT        LP TA PH   L P +P+   L I+P +L+
Sbjct: 130 KAPLSSLPRLTAYITATLVGLPVSPLPQTASPHRRHLAPLSPVAFGLAIAPSSLA 184


>tr|A8JFD4|A8JFD4_CHLRE Glyoxal or galactose oxidase (Fragment)
           OS=Chlamydomonas reinhardtii GN=GOX4 PE=4 SV=1
          Length = 898

 Score = 33.9 bits (76), Expect = 6.1
 Identities = 26/74 (35%), Positives = 28/74 (37%), Gaps = 5/74 (6%)
 Frame = -1

Query: 219 THSPTPPQKCLL*GALVTKSPRDPKPTSLAYPGATQAAPELPSTAGPHALS-----LCPT 55
           T SP PP   +L       SP  P+P S   P      P LP T GP           P 
Sbjct: 295 TPSPPPPPSTVLTSPSPPPSPPPPRPPSPPPPRPPPPRPPLPGTGGPKPSGDAFPPTPPD 354

Query: 54  TPLNLDLVISPRAL 13
            PL   L  SP AL
Sbjct: 355 APLFPPLSPSPPAL 368


>tr|B6KPE2|B6KPE2_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_009660 PE=4 SV=1
          Length = 1430

 Score = 33.9 bits (76), Expect = 6.1
 Identities = 18/51 (35%), Positives = 27/51 (52%)
 Frame = -1

Query: 237 PLQIEKTHSPTPPQKCLL*GALVTKSPRDPKPTSLAYPGATQAAPELPSTA 85
           P  + +T   + P  CL  GAL ++S   P   + A+P + QAA   P+TA
Sbjct: 188 PPHLSRTDGSSHPSVCLPCGALTSQSFISPSSPACAFPSSPQAASFPPATA 238


>tr|Q4RTZ8|Q4RTZ8_TETNG Chromosome 12 SCAF14996, whole genome shotgun
            sequence. (Fragment) OS=Tetraodon nigroviridis
            GN=GSTENG00029017001 PE=4 SV=1
          Length = 1260

 Score = 33.5 bits (75), Expect = 7.9
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
 Frame = +1

Query: 241  LTIPQVLHHKQMSRYQRFCLQSSLCWSMEISRC----LFEKWATMCQHHFSAVFRYTPHF 408
            L+I   L H    R+ +F  ++  C+S+ +S+     L+      C HHF+  F    HF
Sbjct: 898  LSIITELTHPSNMRFMQF--RAKDCYSLALSKLEKVSLWTGNPLTCLHHFNDYF----HF 951

Query: 409  PWSKESSHDQIQSPGRFYMRTPFGRGRLFKL 501
            P+  E       S   F  R PF  GR+F +
Sbjct: 952  PFQIERDKG---SNLAFMFRLPFAAGRVFSI 979


>tr|A2ZAP9|A2ZAP9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_34830 PE=4 SV=1
          Length = 323

 Score = 33.5 bits (75), Expect = 7.9
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = -1

Query: 210 PTPPQKCLL*GALVTKSPRDPKPTSLAYPGATQAAPELPSTAGPHALSLCPTT 52
           P PP    +        P  P P S+A P  + A+P  PSTA P   S  PTT
Sbjct: 195 PAPPMPPTIARPPRPLPPASPPPPSIATPPPSPASPPPPSTATPPPPSPTPTT 247