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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913629
Clone id YMU001_000032_D09
Library
Length 582
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GATATTACCTGCAGGTACTCAGGACCTTGTGATTCTTCTTCTCGATTTTGAGAAGGCATA
CAACAGAGTTGACTGGGACTTTTTAGAGGGCACGCTACGCAGGATGGGCTTCTCAGATGC
TTGGATCAGAGGGATGTCAGCTTGGTACAGACAGGCTCATAGTCAGGTGCTTTTGGCAGG
AGGTAGAGGTGAGCGCTTCATGCTCACACGATCGGTCAGACAGGGTTGTCCTCTTGCCCC
CTTTCTCTTTTTGTTCTATGCGGAGGCGATGAGCAGATTTTTGGTGTCATAGCAGGTTGG
TCTGAGAGGCTTAGGTCTGAGAGGCTTAGCACTCCCTATACGGGGAGATGAGCTTCTGGA
CGCTGAGTTTGCCGACGACTCAGCCTTGTACTTAGAGGGCCAGGAGGCCAATTTACACAG
ATGTGAGCAGGCTCTGGAGACCTTCTGTTGTGCATCGGGCGCACCGATCAACTGGAGAAA
GACAGTGGCTTTCTCGGTTGGCAGTGCTCCTGTGCCAGATTGGATGCCAGGAGAGGGTTT
CAGGTGGATTCCTCCAGGGACTGCAGTTAGGTACTTGGGTTG
■■Homology search results ■■ -
sp_hit_id P08548
Definition sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nycticebus coucang
Align length 158
Score (bit) 70.1
E-value 8.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913629|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_D09.
         (582 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog OS=Nyc...    70   8e-12
sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa prot...    62   2e-09
sp|P11369|POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1 O...    58   4e-08
sp|Q03278|PO21_NASVI Retrovirus-related Pol polyprotein from typ...    40   0.006
sp|Q03274|PO22_POPJA Retrovirus-related Pol polyprotein from typ...    38   0.032
sp|P16423|POLR_DROME Retrovirus-related Pol polyprotein from typ...    38   0.042
sp|Q05118|PO23_POPJA Retrovirus-related Pol polyprotein from typ...    37   0.093
sp|P50535|MSL1_DROME Protein male-specific lethal-1 OS=Drosophil...    31   5.2  
sp|Q4UMI6|RICKA_RICFE Arp2/3 complex-activating protein rickA OS...    30   6.7  
sp|O35674|ADA19_MOUSE ADAM 19 OS=Mus musculus GN=Adam19 PE=2 SV=2      30   6.7  
sp|Q96AP4|ZUFSP_HUMAN Zinc finger with UFM1-specific peptidase d...    30   8.7  
sp|P34620|YO84_CAEEL Putative uncharacterized transposon-derived...    30   8.7  

>sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog
            OS=Nycticebus coucang PE=1 SV=1
          Length = 1260

 Score = 70.1 bits (170), Expect = 8e-12
 Identities = 43/158 (27%), Positives = 77/158 (48%)
 Frame = +2

Query: 20   QDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGERF 199
            +D +IL +D EKA++ +   F+  TL+++G    +++ + A Y +  + ++L G + + F
Sbjct: 591  KDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSF 650

Query: 200  MLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFADD 379
             L    RQGCPL+P LF    E ++                        +E+  + FADD
Sbjct: 651  PLRSGTRQGCPLSPLLFNIVMEVLA--------IAIREEKAIKGIHIGSEEIKLSLFADD 702

Query: 380  SALYLEGQEANLHRCEQALETFCCASGAPINWRKTVAF 493
              +YLE    +  +  + ++ +   SG  IN  K+VAF
Sbjct: 703  MIVYLENTRDSTTKLLEVIKEYSNVSGYKINTHKSVAF 740


>sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein
            OS=Xenopus laevis PE=4 SV=1
          Length = 1308

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 56/186 (30%), Positives = 81/186 (43%), Gaps = 1/186 (0%)
 Frame = +2

Query: 26   LVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGERFML 205
            L  L LD EKA++RVD  +L GTL+   F   ++  +   Y  A   V +          
Sbjct: 588  LAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAF 647

Query: 206  TRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFADDSA 385
             R VRQGCPL+  L   Y+ A+  FL                       ++ + +ADD  
Sbjct: 648  GRGVRQGCPLSGQL---YSLAIEPFL-----CLLRKRLTGLVLKEPDMRVVLSAYADDVI 699

Query: 386  LYLEGQEANLHRCEQALETFCCASGAPINWRKTVAFSVGSAPVPDWMPGEGFRWIP-PGT 562
            L  +    +L R ++  E +  AS A INW K+     GS  V D++P   FR I     
Sbjct: 700  LVAQ-DLVDLERAQECQEVYAAASSARINWSKSSGLLEGSLKV-DFLP-PAFRDISWESK 756

Query: 563  AVRYLG 580
             ++YLG
Sbjct: 757  IIKYLG 762


>sp|P11369|POL2_MOUSE Retrovirus-related Pol polyprotein LINE-1 OS=Mus
            musculus GN=Pol PE=2 SV=2
          Length = 1281

 Score = 57.8 bits (138), Expect = 4e-08
 Identities = 38/155 (24%), Positives = 69/155 (44%)
 Frame = +2

Query: 29   VILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGERFMLT 208
            +I+ LD EKA++++   F+   L R G    ++  + A Y +  + + + G + E   L 
Sbjct: 602  MIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKLEAIPLK 661

Query: 209  RSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFADDSAL 388
               RQGCPL+P+LF    E ++R +                     +E+  +  ADD  +
Sbjct: 662  SGTRQGCPLSPYLFNIVLEVLARAI--------RQQKEIKGIQIGKEEVKISLLADDMIV 713

Query: 389  YLEGQEANLHRCEQALETFCCASGAPINWRKTVAF 493
            Y+   + +       + +F    G  IN  K++AF
Sbjct: 714  YISDPKNSTRELLNLINSFGEVVGYKINSNKSMAF 748


>sp|Q03278|PO21_NASVI Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R2 (Fragment) OS=Nasonia
           vitripennis PE=4 SV=2
          Length = 1025

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
 Frame = +2

Query: 26  LVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAW-YRQAHSQVLLAGGRGERFM 202
           L I +LD +KA++ V+   +   LRR       +R    W YR + +++ +   +G    
Sbjct: 450 LYIAILDVKKAFDSVEHRSILDALRRKKLP-LEMRNYIMWVYRNSKTRLEVVKTKGRWIR 508

Query: 203 LTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFADDS 382
             R VRQG PL+P LF    +A+ R L                     +++    FADD 
Sbjct: 509 PARGVRQGDPLSPLLFNCVMDAVLRRL-----------PENTGFLMGAEKIGALVFADDL 557

Query: 383 ALYL---EGQEANLHRCEQALE 439
            L     EG +A+L R E  L+
Sbjct: 558 VLLAETREGLQASLSRIEAGLQ 579


>sp|Q03274|PO22_POPJA Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R2 (Fragment) OS=Popillia
           japonica PE=4 SV=1
          Length = 711

 Score = 38.1 bits (87), Expect = 0.032
 Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 1/160 (0%)
 Frame = +2

Query: 32  ILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLA-GGRGERFMLT 208
           ++ LD  KA++ V    +   L+R+G  +     ++     + + + +  G +  +  + 
Sbjct: 139 VVSLDVRKAFDTVSHSSICRALQRLGIDEGTSNYITGSLSDSTTTIRVGPGSQTRKICIR 198

Query: 209 RSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFADDSAL 388
           R V+QG PL+PFLF      +   L S Q                 +++    FADD  L
Sbjct: 199 RGVKQGDPLSPFLF---NAVLDELLCSLQ------STPGIGGTIGEEKIPVLAFADD-LL 248

Query: 389 YLEGQEANLHRCEQALETFCCASGAPINWRKTVAFSVGSA 508
            LE  +  L      +  F    G  +N +K+V+ SV ++
Sbjct: 249 LLEDNDVLLPTTLATVANFFRLRGMSLNAKKSVSISVAAS 288


>sp|P16423|POLR_DROME Retrovirus-related Pol polyprotein from type-2
           retrotransposable element R2DM OS=Drosophila
           melanogaster GN=pol PE=4 SV=1
          Length = 1057

 Score = 37.7 bits (86), Expect = 0.042
 Identities = 24/83 (28%), Positives = 38/83 (45%)
 Frame = +2

Query: 41  LDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGERFMLTRSVR 220
           LD  KA++ +    +  TLR  G    ++  +   Y    + +   G   E F+  R V+
Sbjct: 481 LDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVK 540

Query: 221 QGCPLAPFLFLFYAEAMSRFLVS 289
           QG PL+P LF    + + R L S
Sbjct: 541 QGDPLSPILFNLVMDRLLRTLPS 563


>sp|Q05118|PO23_POPJA Retrovirus-related Pol polyprotein from type-1
           retrotransposable element R2 (Fragment) OS=Popillia
           japonica PE=4 SV=1
          Length = 606

 Score = 36.6 bits (83), Expect = 0.093
 Identities = 18/73 (24%), Positives = 35/73 (47%)
 Frame = +2

Query: 32  ILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGERFMLTR 211
           ++ LD  KA++ V    +   +R  G  D     + +    A++ +++ G    +  +  
Sbjct: 25  VVSLDIRKAFDTVSHPAILRAMRAFGIDDGMQDFIMSTITDAYTNIVVGGRTTNKIYIRN 84

Query: 212 SVRQGCPLAPFLF 250
            V+QG PL+P LF
Sbjct: 85  GVKQGDPLSPVLF 97


>sp|P50535|MSL1_DROME Protein male-specific lethal-1 OS=Drosophila
           melanogaster GN=msl-1 PE=1 SV=2
          Length = 1039

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 582 QPKYLTAVPGGIHLKPSPGIQSGTGALPTEKAT 484
           QP++  A+P GI++K SP +    GA+  + A+
Sbjct: 222 QPQFANALPRGINMKESPALDHHAGAVTNQPAS 254


>sp|Q4UMI6|RICKA_RICFE Arp2/3 complex-activating protein rickA
           OS=Rickettsia felis GN=rickA PE=3 SV=2
          Length = 526

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = -2

Query: 530 LASNLAQEHCQPRKPLSFSS*SVRPMHNRRSPEPAHICVNWPPGPLSTRLSRRQTQRP 357
           + SNLA      ++P+  +S   +P+ N  +P P     N PP P    LS+     P
Sbjct: 288 IVSNLANHMTSKKEPILTTSSIAKPLENNVTPPPPLTKNNIPPPPPPPPLSKNNILPP 345


>sp|O35674|ADA19_MOUSE ADAM 19 OS=Mus musculus GN=Adam19 PE=2 SV=2
          Length = 920

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 461 RPMHNRRSPEPAHICVNWPPGPLSTRLSRRQTQRPEA 351
           +P H    P P ++ V  PP PL   L+R     PEA
Sbjct: 787 KPSHPPPRPPPDYLRVESPPAPLPAHLNRAAGSSPEA 823
tr_hit_id Q7XLZ5
Definition tr|Q7XLZ5|Q7XLZ5_ORYSJ OSJNBa0086O06.14 protein OS=Oryza sativa subsp. japonica
Align length 152
Score (bit) 87.0
E-value 7.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913629|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_D09.
         (582 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7XLZ5|Q7XLZ5_ORYSJ OSJNBa0086O06.14 protein OS=Oryza sativa ...    87   7e-16
tr|A3AWW8|A3AWW8_ORYSJ Putative uncharacterized protein OS=Oryza...    87   7e-16
tr|O82276|O82276_ARATH Putative non-LTR retroelement reverse tra...    86   1e-15
tr|Q53PH7|Q53PH7_ORYSJ Retrotransposon protein, putative, unclas...    84   6e-15
tr|Q2HS45|Q2HS45_MEDTR RNA-directed DNA polymerase (Reverse tran...    84   7e-15
tr|O22148|O22148_ARATH Putative non-LTR retroelement reverse tra...    84   7e-15
tr|Q2QWF4|Q2QWF4_ORYSJ Retrotransposon protein, putative, unclas...    83   1e-14
tr|A3CFR5|A3CFR5_ORYSJ Putative uncharacterized protein OS=Oryza...    83   1e-14
tr|Q84MQ3|Q84MQ3_ORYSJ Putative reverse transcriptase (Putative ...    83   1e-14
tr|A2XHV0|A2XHV0_ORYSI Putative uncharacterized protein OS=Oryza...    83   1e-14
tr|Q9FW98|Q9FW98_ORYSJ Putative non-LTR retroelement reverse tra...    82   2e-14
tr|Q7XCU0|Q7XCU0_ORYSJ Retrotransposon protein, putative, unclas...    82   2e-14
tr|A5AK79|A5AK79_VITVI Putative uncharacterized protein OS=Vitis...    82   2e-14
tr|A3B6L1|A3B6L1_ORYSJ Putative uncharacterized protein OS=Oryza...    82   2e-14
tr|Q9M1F2|Q9M1F2_ARATH Putative uncharacterized protein F9K21.13...    82   2e-14
tr|A3BTK9|A3BTK9_ORYSJ Putative uncharacterized protein OS=Oryza...    82   2e-14
tr|Q9SIS9|Q9SIS9_ARATH Putative non-LTR retroelement reverse tra...    82   3e-14
tr|A5BSZ6|A5BSZ6_VITVI Putative uncharacterized protein OS=Vitis...    82   3e-14
tr|A5AD48|A5AD48_VITVI Putative uncharacterized protein OS=Vitis...    82   3e-14
tr|A5C4L0|A5C4L0_VITVI Putative uncharacterized protein OS=Vitis...    81   5e-14
tr|A5BR45|A5BR45_VITVI Putative uncharacterized protein OS=Vitis...    80   6e-14
tr|A5BA26|A5BA26_VITVI Putative uncharacterized protein OS=Vitis...    80   6e-14
tr|A5B0H6|A5B0H6_VITVI Putative uncharacterized protein OS=Vitis...    80   6e-14
tr|A5CAR7|A5CAR7_VITVI Putative uncharacterized protein OS=Vitis...    80   8e-14
tr|A5C9Z7|A5C9Z7_VITVI Putative uncharacterized protein OS=Vitis...    80   8e-14
tr|A5BPJ7|A5BPJ7_VITVI Putative uncharacterized protein OS=Vitis...    80   8e-14
tr|B8AWH5|B8AWH5_ORYSI Putative uncharacterized protein OS=Oryza...    80   1e-13
tr|A5C4A5|A5C4A5_VITVI Putative uncharacterized protein OS=Vitis...    80   1e-13
tr|A5BHN0|A5BHN0_VITVI Putative uncharacterized protein OS=Vitis...    80   1e-13
tr|A5B034|A5B034_VITVI Putative uncharacterized protein OS=Vitis...    80   1e-13

>tr|Q7XLZ5|Q7XLZ5_ORYSJ OSJNBa0086O06.14 protein OS=Oryza sativa
            subsp. japonica GN=OSJNBa0086O06.14 PE=4 SV=2
          Length = 1205

 Score = 87.0 bits (214), Expect = 7e-16
 Identities = 52/152 (34%), Positives = 76/152 (50%)
 Frame = +2

Query: 17   TQDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGER 196
            +QD   L LD  KAY+RVDW FL+G L+++GF + W + + +        V L G   E 
Sbjct: 555  SQDFCALKLDLSKAYDRVDWGFLDGALQKLGFGNIWRKWIMSCVTSVRYSVRLNGNMLEP 614

Query: 197  FMLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFAD 376
            F  TR +R+G PL P+LFLF A+ +S  L   +                   LL   FAD
Sbjct: 615  FYPTRGLREGDPLNPYLFLFIADGLSNILQRRRDERQIQPLKVCRSAPGVSHLL---FAD 671

Query: 377  DSALYLEGQEANLHRCEQALETFCCASGAPIN 472
            DS L+ + +     R ++AL+ +   +G  IN
Sbjct: 672  DSLLFFKAEVIQATRIKEALDLYERCTGQLIN 703


>tr|A3AWW8|A3AWW8_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_015290 PE=4 SV=1
          Length = 1574

 Score = 87.0 bits (214), Expect = 7e-16
 Identities = 52/152 (34%), Positives = 76/152 (50%)
 Frame = +2

Query: 17   TQDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGER 196
            +QD   L LD  KAY+RVDW FL+G L+++GF + W + + +        V L G   E 
Sbjct: 924  SQDFCALKLDLSKAYDRVDWGFLDGALQKLGFGNIWRKWIMSCVTSVRYSVRLNGNMLEP 983

Query: 197  FMLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFAD 376
            F  TR +R+G PL P+LFLF A+ +S  L   +                   LL   FAD
Sbjct: 984  FYPTRGLREGDPLNPYLFLFIADGLSNILQRRRDERQIQPLKVCRSAPGVSHLL---FAD 1040

Query: 377  DSALYLEGQEANLHRCEQALETFCCASGAPIN 472
            DS L+ + +     R ++AL+ +   +G  IN
Sbjct: 1041 DSLLFFKAEVIQATRIKEALDLYERCTGQLIN 1072


>tr|O82276|O82276_ARATH Putative non-LTR retroelement reverse
           transcriptase OS=Arabidopsis thaliana GN=At2g31080 PE=2
           SV=1
          Length = 1231

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 52/160 (32%), Positives = 75/160 (46%)
 Frame = +2

Query: 14  GTQDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGE 193
           G +  ++L LD EKAY+RV WDFL+ TL   G S+ W   + A        VL  G R +
Sbjct: 429 GRKGWMLLKLDLEKAYDRVRWDFLQETLEAAGLSEGWTSRIMAGVTDPSMSVLWNGERTD 488

Query: 194 RFMLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFA 373
            F+  R +RQG PL+P+LF+   E +   +   +                  +L    FA
Sbjct: 489 SFVPARGLRQGDPLSPYLFVLCLERLCHLI---EASVGKREWKPIAVSCGGSKLSHVCFA 545

Query: 374 DDSALYLEGQEANLHRCEQALETFCCASGAPINWRKTVAF 493
           DD  L+ E   A +    + LE FC ASG  ++  K+  F
Sbjct: 546 DDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIF 585


>tr|Q53PH7|Q53PH7_ORYSJ Retrotransposon protein, putative,
           unclassified OS=Oryza sativa subsp. japonica
           GN=LOC_Os11g07520 PE=4 SV=1
          Length = 849

 Score = 84.0 bits (206), Expect = 6e-15
 Identities = 51/164 (31%), Positives = 78/164 (47%)
 Frame = +2

Query: 20  QDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGERF 199
           Q  +IL LDFEKAY++V W FL   L++ GF D WI+ + +        + + G   + F
Sbjct: 291 QSGIILKLDFEKAYDKVQWSFLFDVLQKKGFDDKWIKWIKSATIDGRVAININGEIDQYF 350

Query: 200 MLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFADD 379
              R VRQG PL+P LF   A+A+S  L+                      L   ++ADD
Sbjct: 351 KTFRGVRQGDPLSPLLFNIVADALSEILLK---AKEAGHLEGLVPHLVQGGLTHLQYADD 407

Query: 380 SALYLEGQEANLHRCEQALETFCCASGAPINWRKTVAFSVGSAP 511
           + L++   + N+   +  L  F   SG  IN++K+    +G  P
Sbjct: 408 TILFMTNNDQNVITTKFILHCFEAMSGLKINYQKSEVIVLGENP 451


>tr|Q2HS45|Q2HS45_MEDTR RNA-directed DNA polymerase (Reverse
           transcriptase) OS=Medicago truncatula
           GN=MtrDRAFT_AC157503g30v2 PE=4 SV=2
          Length = 653

 Score = 83.6 bits (205), Expect = 7e-15
 Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
 Frame = +2

Query: 14  GTQDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGE 193
           G +    L +D  K Y+RVDW++L   + +MGF+  WI+ M          VL+   R  
Sbjct: 158 GIKGEAALKIDISKTYDRVDWNYLFSIMEKMGFNPIWIKWMRMSVTMVSYHVLVNDDRVG 217

Query: 194 RFMLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFA 373
                R +RQG PL+P+LF+  AE MS  +   +                   LL   FA
Sbjct: 218 PIYPGRGLRQGDPLSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLL---FA 274

Query: 374 DDSALYLEGQEANLHRCEQALETFCCASGAPINWRKTVAFSVGSAPVPDWMPGEGFRWIP 553
           DDS L+    E      +  L+T+  AS   IN +K+  +   + PV          W+ 
Sbjct: 275 DDSFLFFRANENETRALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVS 334

Query: 554 PGTAVR-YLG 580
            G  +R YLG
Sbjct: 335 EGIGIRKYLG 344


>tr|O22148|O22148_ARATH Putative non-LTR retroelement reverse
            transcriptase OS=Arabidopsis thaliana GN=At2g45230 PE=2
            SV=1
          Length = 1374

 Score = 83.6 bits (205), Expect = 7e-15
 Identities = 48/156 (30%), Positives = 79/156 (50%)
 Frame = +2

Query: 17   TQDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGER 196
            +++ + +  D  KAY+RV+W FLE  +R +GF+D WIR +    +    QVL+ G     
Sbjct: 567  SEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGE 626

Query: 197  FMLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFAD 376
             + +R +RQG PL+P+LF+   E + + L S +                   LL   FAD
Sbjct: 627  IIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLL---FAD 683

Query: 377  DSALYLEGQEANLHRCEQALETFCCASGAPINWRKT 484
            DS  Y +  +  L +  + +E +  ASG  +N+ K+
Sbjct: 684  DSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKS 719


>tr|Q2QWF4|Q2QWF4_ORYSJ Retrotransposon protein, putative,
            unclassified OS=Oryza sativa subsp. japonica
            GN=LOC_Os12g09530 PE=4 SV=1
          Length = 1100

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 51/143 (35%), Positives = 69/143 (48%)
 Frame = +2

Query: 17   TQDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGER 196
            +Q+     LD  KAY+RVDW +LEG L RMGFS+ WI+ M A        V   G   + 
Sbjct: 684  SQEFCAYKLDLAKAYDRVDWQYLEGVLDRMGFSNTWIQWMMACVTSVRYAVRFNGSMLKS 743

Query: 197  FMLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFAD 376
            F  +R +RQG PL+P+LFLF A+ +S  L S                     LL   FAD
Sbjct: 744  FQPSRGLRQGDPLSPYLFLFVADGLSTILSSAVRTGDLVPLKVCRQAPGISHLL---FAD 800

Query: 377  DSALYLEGQEANLHRCEQALETF 445
            DS L+ +         ++AL  +
Sbjct: 801  DSLLFFKANVEQATVVKEALNLY 823


>tr|A3CFR5|A3CFR5_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_034137 PE=4 SV=1
          Length = 1055

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 51/143 (35%), Positives = 69/143 (48%)
 Frame = +2

Query: 17   TQDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGER 196
            +Q+     LD  KAY+RVDW +LEG L RMGFS+ WI+ M A        V   G   + 
Sbjct: 639  SQEFCAYKLDLAKAYDRVDWQYLEGVLDRMGFSNTWIQWMMACVTSVRYAVRFNGSMLKS 698

Query: 197  FMLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFAD 376
            F  +R +RQG PL+P+LFLF A+ +S  L S                     LL   FAD
Sbjct: 699  FQPSRGLRQGDPLSPYLFLFVADGLSTILSSAVRTGDLVPLKVCRQAPGISHLL---FAD 755

Query: 377  DSALYLEGQEANLHRCEQALETF 445
            DS L+ +         ++AL  +
Sbjct: 756  DSLLFFKANVEQATVVKEALNLY 778


>tr|Q84MQ3|Q84MQ3_ORYSJ Putative reverse transcriptase (Putative
           uncharacterized protein) (Retrotransposon protein,
           putative, unclassified) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0030J19.11 PE=4 SV=1
          Length = 818

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 48/141 (34%), Positives = 71/141 (50%)
 Frame = +2

Query: 17  TQDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGER 196
           +Q    L LD  KA++RVDWDFL+G L R+GF++ W + + +        V   G   E 
Sbjct: 88  SQMFCALKLDLSKAFDRVDWDFLDGVLLRLGFAEKWRKWIMSCVTFVQYSVRFNGNLLEP 147

Query: 197 FMLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFAD 376
           F  +R +RQG PL+P+LFLF A+ +S  L   +                   LL   FAD
Sbjct: 148 FKPSRGLRQGDPLSPYLFLFIADGLSNILEKCKTDGLIQPLKVCRGAPGVSHLL---FAD 204

Query: 377 DSALYLEGQEANLHRCEQALE 439
           DS L+ + ++A      +AL+
Sbjct: 205 DSLLFFKAEDARQEEIRRALQ 225


>tr|A2XHV0|A2XHV0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11988 PE=4 SV=1
          Length = 818

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 48/141 (34%), Positives = 71/141 (50%)
 Frame = +2

Query: 17  TQDLVILLLDFEKAYNRVDWDFLEGTLRRMGFSDAWIRGMSAWYRQAHSQVLLAGGRGER 196
           +Q    L LD  KA++RVDWDFL+G L R+GF++ W + + +        V   G   E 
Sbjct: 88  SQMFCALKLDLSKAFDRVDWDFLDGVLLRLGFAEKWRKWIMSCVTFVQYSVRFNGNLLEP 147

Query: 197 FMLTRSVRQGCPLAPFLFLFYAEAMSRFLVS*QVXXXXXXXXXXXXXXXXDELLDAEFAD 376
           F  +R +RQG PL+P+LFLF A+ +S  L   +                   LL   FAD
Sbjct: 148 FKPSRGLRQGDPLSPYLFLFIADGLSNILEKCKTDGLIQPLKVCRGAPGVSHLL---FAD 204

Query: 377 DSALYLEGQEANLHRCEQALE 439
           DS L+ + ++A      +AL+
Sbjct: 205 DSLLFFKAEDARQEEIRRALQ 225