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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913630
Clone id YMU001_000032_D10
Library
Length 498
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGACGGCCTCGAGCATGTGAAGACATGTTGGAGCATCCATCAAATGAAGATGCAGAGGAA
CTATCTTCATTTGCACCAAGAGAACCTCCAATCAACAATGCATCCTGGTGGGGTACTGCG
GGTCTTTGACCATCGCTGCTCATAGTACCCTCACCGACACTCAACGAGACTTCACCTTGA
AAAGTGCCCTGACTACATGAAAACATCGGTATTTCATAACAAGACTTGCCATGGTCATCA
TAAGGTGGCTGATGTGAATCTTGGTGTGAGGAAAGTTACTCTACATCCACGACAAATTCA
GGAACATCCAGCTTCTCAGGAGAAGCAACAACTCCCTCAAAGCCTAGCTGTTCCTTCGAG
AATGAATCAAGGAGAGCACATTCAATCCCATACTCTGGGACAGCATCTTGAGGTCCTTCA
TCTCCTTTCAACATAGCATCAACCACCTTAAACTCATCCATCCCCTTCAACAAAGCCAGA
TCCCTTGCAGCTGAATCC
■■Homology search results ■■ -
sp_hit_id Q9WTQ5
Definition sp|Q9WTQ5|AKA12_MOUSE A-kinase anchor protein 12 OS=Mus musculus
Align length 54
Score (bit) 31.6
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913630|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_D10.
         (498 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WTQ5|AKA12_MOUSE A-kinase anchor protein 12 OS=Mus musculus...    32   2.1  
sp|A9BF33|RPOB_PETMO DNA-directed RNA polymerase subunit beta OS...    30   4.7  
sp|Q88R90|GSH1_PSEPK Glutamate--cysteine ligase OS=Pseudomonas p...    30   4.7  
sp|Q86VP3|PACS2_HUMAN Phosphofurin acidic cluster sorting protei...    30   8.0  

>sp|Q9WTQ5|AKA12_MOUSE A-kinase anchor protein 12 OS=Mus musculus
            GN=Akap12 PE=1 SV=1
          Length = 1684

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 19/54 (35%), Positives = 30/54 (55%)
 Frame = -2

Query: 440  DAMLKGDEGPQDAVPEYGIECALLDSFSKEQLGFEGVVASPEKLDVPEFVVDVE 279
            D+ +   E  +D VPE  ++ A  +  ++   G E V A+PE L+VPE   DV+
Sbjct: 1058 DSEVLATEKEKDVVPEGPVQEAETEHLAQ---GSETVQATPESLEVPEVTEDVD 1108


>sp|A9BF33|RPOB_PETMO DNA-directed RNA polymerase subunit beta
            OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rpoB
            PE=3 SV=1
          Length = 1187

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +2

Query: 194  YMKTSVFHNKTCHGHHKVADV--NLGVRKVTLHPRQIQEHPASQEKQQLPQSLAVPSRMN 367
            Y+K  +   KT     K+A    N GV    L+   +   P     Q L   L VPSRMN
Sbjct: 927  YVKVFIATKKTLQVGDKLAGRHGNKGVISTILNKEDMPFLPDGTPLQMLLSPLGVPSRMN 986

Query: 368  QGEHIQSH 391
             G+ ++ H
Sbjct: 987  IGQVLELH 994


>sp|Q88R90|GSH1_PSEPK Glutamate--cysteine ligase OS=Pseudomonas
           putida (strain KT2440) GN=gshA PE=3 SV=1
          Length = 525

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +2

Query: 239 HKVADVNLGVRKVTLHPRQIQEHPASQEKQQLPQSLAVPSRMNQGE 376
           H  + V   +R+  +H    +E P S EKQQ  ++LA  S   Q E
Sbjct: 455 HDESFVQFSLRQSRVHAETFREQPLSNEKQQAFETLARESLARQSE 500


>sp|Q86VP3|PACS2_HUMAN Phosphofurin acidic cluster sorting protein 2
           OS=Homo sapiens GN=PACS2 PE=1 SV=3
          Length = 889

 Score = 29.6 bits (65), Expect = 8.0
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
 Frame = -2

Query: 479 LALLKGMDEFKVVDAMLKGDEGPQDAVPEYGIECALL-DSFSKEQLGFEGVVASPEKLDV 303
           +ALL+    FKV D +L  ++ P + +PE   +  LL D+   E     G          
Sbjct: 256 VALLR---RFKVSDEVLDSEQDPAEHIPEAEEDLDLLYDTLDMEHPSDSG---------- 302

Query: 302 PEFVVDVE*LSSHQDSHQPPYD--DHGKSCYEIPMFSCSQGTFQGEVSLSVGEGTMSSDG 129
           P+   D   LS+ +   +P ++   H  S  EI     ++   +      V E T S  G
Sbjct: 303 PDMEDDDSVLSTPKPKLRPYFEGLSHSSSQTEIGSIHSARSHKEPPSPADVPEKTRSLGG 362

Query: 128 QRPAVPHQDALLIG 87
           ++P+    D + +G
Sbjct: 363 RQPSDSVSDTVALG 376
tr_hit_id A9WPI7
Definition tr|A9WPI7|A9WPI7_RENSM ATP-dependent DNA helicase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589)
Align length 66
Score (bit) 35.0
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913630|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_D10.
         (498 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9WPI7|A9WPI7_RENSM ATP-dependent DNA helicase OS=Renibacteri...    35   2.0  
tr|B8FKT6|B8FKT6_9DELT Amidase OS=Desulfatibacillum alkenivorans...    35   2.0  
tr|Q0ICQ1|Q0ICQ1_SYNS3 Septum site-determining protein MinC OS=S...    35   2.6  
tr|P70012|P70012_XENLA Nuclear/mitotic apparatus protein OS=Xeno...    34   3.4  
tr|B5DLY7|B5DLY7_DROPS Brk OS=Drosophila pseudoobscura pseudoobs...    34   4.4  
tr|A6RSN4|A6RSN4_BOTFB Putative uncharacterized protein OS=Botry...    34   4.4  
tr|A7PR04|A7PR04_VITVI Chromosome chr6 scaffold_25, whole genome...    33   5.7  
tr|B6P2M2|B6P2M2_BRAFL Putative uncharacterized protein OS=Branc...    33   5.7  
tr|B4LZ92|B4LZ92_DROVI GJ23272 OS=Drosophila virilis GN=GJ23272 ...    33   5.7  
tr|Q7RDH5|Q7RDH5_PLAYO Putative uncharacterized protein PY05447 ...    33   7.5  
tr|Q4FV18|Q4FV18_PSYA2 Putative NH3-dependent (Glutamine-hydroly...    33   9.8  
tr|A9MI93|A9MI93_SALAR Putative uncharacterized protein OS=Salmo...    33   9.8  
tr|B7G167|B7G167_PHATR Predicted protein OS=Phaeodactylum tricor...    33   9.8  
tr|Q54YK3|Q54YK3_DICDI Putative uncharacterized protein OS=Dicty...    33   9.8  
tr|B6LV21|B6LV21_BRAFL Putative uncharacterized protein OS=Branc...    33   9.8  

>tr|A9WPI7|A9WPI7_RENSM ATP-dependent DNA helicase OS=Renibacterium
           salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589)
           GN=RSal33209_1234 PE=4 SV=1
          Length = 1073

 Score = 35.0 bits (79), Expect = 2.0
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = +1

Query: 10  RACEDMLEHPSNEDAEELSSFAPREPP-INNASWWGTAGL*PSLLIVPSPTLNETSP*KV 186
           R  +D  E P+ E A  L+  A    P  + +SWWG A L  +  I+P   +   SP K+
Sbjct: 768 RDSDDRAEQPAAEAARVLAELARNAVPGADPSSWWGLAPLSSTDPILPVDAVVPVSPSKI 827

Query: 187 P*LHEN 204
             +HE+
Sbjct: 828 EAVHES 833


>tr|B8FKT6|B8FKT6_9DELT Amidase OS=Desulfatibacillum alkenivorans
           AK-01 GN=Dalk_2766 PE=4 SV=1
          Length = 480

 Score = 35.0 bits (79), Expect = 2.0
 Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 16/132 (12%)
 Frame = -2

Query: 467 KGMDEFKVVDAMLKGDEGPQDAVPEYGIECALLDSFSKEQLGF-EGVVASP---EKLD-- 306
           + +DE    DA LK + GP++  P +G+ C++ + FS   +    G+VA     EK D  
Sbjct: 51  QALDEADAADAFLK-ENGPENCPPFHGVPCSIKECFSLTGMPHTSGLVARKGIIEKKDAT 109

Query: 305 ----------VPEFVVDVE*LSSHQDSHQPPYDDHGKSCYEIPMFSCSQGTFQGEVSLSV 156
                     +P  V ++  L    +SH   Y     +CY++       G   G    S 
Sbjct: 110 AAARMRRAGLIPIGVTNISELCMWMESHNKVYGT-TNNCYDL-------GRIVG--GSSG 159

Query: 155 GEGTMSSDGQRP 120
           GEG + S G  P
Sbjct: 160 GEGCIVSSGASP 171


>tr|Q0ICQ1|Q0ICQ1_SYNS3 Septum site-determining protein MinC
           OS=Synechococcus sp. (strain CC9311) GN=minC PE=4 SV=1
          Length = 237

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = +2

Query: 221 KTCHGHHKVADVNLGVRKVTLHPRQIQEHPASQEKQQLPQSLAVPSRMNQGEHIQS 388
           K+C+ H  V+   LG+    + P+     P S+E+QQ P  L   + +  G+H+++
Sbjct: 77  KSCNPHTVVSANALGIPAQLMTPQPTDPRPESREEQQAPALLIHRATLRSGDHLKA 132


>tr|P70012|P70012_XENLA Nuclear/mitotic apparatus protein OS=Xenopus
            laevis GN=NuMA PE=2 SV=1
          Length = 2253

 Score = 34.3 bits (77), Expect = 3.4
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 8/79 (10%)
 Frame = +2

Query: 185  CPDYMKTS--------VFHNKTCHGHHKVADVNLGVRKVTLHPRQIQEHPASQEKQQLPQ 340
            CP ++KTS        +F +       K+ D    +R+ TL P QIQ+   S  +    Q
Sbjct: 2034 CPPHLKTSYPLESRPSIFSSTITDEEVKLGDPKETLRRATLLPGQIQDSMTSTRR----Q 2089

Query: 341  SLAVPSRMNQGEHIQSHTL 397
            +LAVP      EH++ H +
Sbjct: 2090 TLAVPG----AEHLKGHNI 2104


>tr|B5DLY7|B5DLY7_DROPS Brk OS=Drosophila pseudoobscura
           pseudoobscura GN=brk PE=4 SV=1
          Length = 816

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
 Frame = +2

Query: 35  IHQMKMQRNYLHLHQENLQSTMHPGGVLRVFDHRCS*YPHRHSTRLHLEKCPDYMKTSVF 214
           +HQM    ++L  H     +  H    L       + +PH+H    H    P        
Sbjct: 155 VHQMHHHHHHLQHHVAAAAAAAHHAHHLLANGFAAAHHPHQHQ---HQHPHPH------A 205

Query: 215 HNKTCHGH-HKVADVNLGVRKVTLHPRQIQEHPASQEKQQLPQS 343
           H    H H H    V + V    +HP Q Q+    Q++QQ  QS
Sbjct: 206 HPLAAHPHLHVPVAVPVAVPVAAVHPHQQQQQQQQQQQQQQQQS 249


>tr|A6RSN4|A6RSN4_BOTFB Putative uncharacterized protein
           OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_03457
           PE=4 SV=1
          Length = 1099

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
 Frame = -2

Query: 488 ARDLALLKGMDEFKVVDAMLKGDEGPQDAVPEYGIECALLDSFSKE-QLGFEGVVASPEK 312
           A D+ +     E K +   ++ D  P+D +     E    ++ S E ++   G+   P +
Sbjct: 476 APDIQIENDDSEPKTIPETVEVDSAPKDQIISENNESENENAESLEPEVQVNGITHDPVQ 535

Query: 311 LDVPEFVVDVE*LSSHQDSHQPPYDDHGKS 222
           ++ PE ++D E       +H PP ++H  S
Sbjct: 536 IETPEQLLDEEPSLEEPSNHDPPLENHEAS 565


>tr|A7PR04|A7PR04_VITVI Chromosome chr6 scaffold_25, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022265001
           PE=4 SV=1
          Length = 444

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +2

Query: 275 VTLHPRQIQEHPASQEKQQLPQSLAVPSRMNQGEHIQSHTLGQHLE 412
           V ++ R +Q+   S  K +LP +L  P   ++G+ IQ+HT    LE
Sbjct: 382 VDMYMRSMQQFTESLAKMKLPMNLDKPEPQDRGDVIQNHTTNLELE 427


>tr|B6P2M2|B6P2M2_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_129928 PE=4 SV=1
          Length = 387

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = -2

Query: 248 PPYDDHGKSCYEIPMFSCSQGTFQGEVSLSVGEGTMSSDGQRPAVPHQD 102
           P Y D  K CY     SC  G  Q   S+  G GT+S  G+    P+ D
Sbjct: 50  PSYGDEVKCCY-----SCHYGGCQTNSSIGAGIGTLSGAGENVTSPYAD 93


>tr|B4LZ92|B4LZ92_DROVI GJ23272 OS=Drosophila virilis GN=GJ23272
           PE=4 SV=1
          Length = 1185

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 28/123 (22%), Positives = 42/123 (34%)
 Frame = +2

Query: 35  IHQMKMQRNYLHLHQENLQSTMHPGGVLRVFDHRCS*YPHRHSTRLHLEKCPDYMKTSVF 214
           +H      +  H HQ+  Q    P        H+      +H   LH ++ P  +     
Sbjct: 588 LHHNNNNSHCQHSHQQQPQHLSSP-------QHQQQYQLQQHQI-LHQQQQPQQLPHHHH 639

Query: 215 HNKTCHGHHKVADVNLGVRKVTLHPRQIQEHPASQEKQQLPQSLAVPSRMNQGEHIQSHT 394
           H+   H HH+             H  Q Q     Q++QQ  Q      +  Q +H Q H 
Sbjct: 640 HHHHHHSHHQ-------------HQHQQQHQQHQQQQQQHQQQQQQQQQQQQQQHYQQHA 686

Query: 395 LGQ 403
           L Q
Sbjct: 687 LQQ 689


>tr|Q7RDH5|Q7RDH5_PLAYO Putative uncharacterized protein PY05447
            OS=Plasmodium yoelii yoelii GN=PY05447 PE=4 SV=1
          Length = 4236

 Score = 33.1 bits (74), Expect = 7.5
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +2

Query: 281  LHPRQIQEHPASQEKQQLPQSLAVPSRMNQGE----HIQSHTLGQHLEVL 418
            LHP+QI  HP      Q+PQ    P +M Q +      Q H + +H+E L
Sbjct: 3562 LHPQQI--HPQQLRSPQIPQQQLTPQQMQQMKMHNIQFQKHEMKKHMEQL 3609