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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913634
Clone id YMU001_000032_E02
Library
Length 560
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTTCGCAAATGTCCTCCATTATAAGGCAGTAATACAGCCTATCAT
AAGTTACATCACTACCAGCACTGCAGGGAGAAGAACCATGGCCTTCACCATTGGTTAACC
ACCAAGTGATCTGGCCAAACAGAAGCTCACCAAAAAACTCAAAGTTGGTAAAACACCAGA
AAAACAAATCAGCCAGACGGGTGAAAAGAGGCTGCCCAGTGCCTACTTCTTGATACAATC
AAACGTTTCGACTTTCTCTTCAGAGAAATCTGAGCTAAATTGCGGGAACCTAAAAAAGAC
AAAGATATGATAAGAAGTCCCTTTAGAGACAGCCTCAGACAGCTGAACTGTAGACAAATA
CAGCACAACATTGCTCATATTAACGATTCCCCCATGAGCAGCTGTGCACATCGACCCATG
CTTCTCTCAATGCATCATCACTAAATACCATAGTTGTCATAGCAATATCCAAATCCATCG
TCCATGTCCCATCCCTTTAGCACAGCCAATGCAGCACCAGCTTCAGGGTCCCATGGCTTT
ATACCTTGAAGAGAAAGCTC
■■Homology search results ■■ -
sp_hit_id A4SPA7
Definition sp|A4SPA7|GLPK_AERS4 Glycerol kinase OS=Aeromonas salmonicida (strain A449)
Align length 36
Score (bit) 32.7
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913634|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_E02.
         (542 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A4SPA7|GLPK_AERS4 Glycerol kinase OS=Aeromonas salmonicida (s...    33   1.2  
sp|A0KIT3|GLPK_AERHH Glycerol kinase OS=Aeromonas hydrophila sub...    33   1.2  
sp|Q5PQ09|F152A_XENLA UPF0326 protein FAM152A OS=Xenopus laevis ...    31   4.5  
sp|Q5XIT6|F152A_RAT UPF0326 protein FAM152A OS=Rattus norvegicus...    30   5.8  
sp|Q5R456|F152A_PONAB UPF0326 protein FAM152A OS=Pongo abelii GN...    30   5.8  
sp|A3QRX8|F152A_PIG UPF0326 protein FAM152A OS=Sus scrofa GN=FAM...    30   5.8  
sp|Q9D291|F152A_MOUSE UPF0326 protein FAM152A OS=Mus musculus GN...    30   5.8  
sp|Q9BSY9|F152A_HUMAN UPF0326 protein FAM152A OS=Homo sapiens GN...    30   5.8  
sp|Q5ZIV7|F152A_CHICK UPF0326 protein FAM152A OS=Gallus gallus G...    30   7.6  

>sp|A4SPA7|GLPK_AERS4 Glycerol kinase OS=Aeromonas salmonicida
           (strain A449) GN=glpK PE=3 SV=1
          Length = 500

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = -2

Query: 133 GELLFGQITWWL----TNGEGHGSSPCSAGSDVTYD 38
           GELLFG I  WL    TNGE H + P +A   + Y+
Sbjct: 160 GELLFGTIDTWLVWKMTNGEVHVTDPTNASRTMLYN 195


>sp|A0KIT3|GLPK_AERHH Glycerol kinase OS=Aeromonas hydrophila subsp.
           hydrophila (strain ATCC 7966 / NCIB 9240) GN=glpK PE=3
           SV=1
          Length = 500

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
 Frame = -2

Query: 133 GELLFGQITWWL----TNGEGHGSSPCSAGSDVTYD 38
           GELLFG I  WL    TNGE H + P +A   + Y+
Sbjct: 160 GELLFGTIDTWLVWKMTNGEVHVTDPTNASRTMLYN 195


>sp|Q5PQ09|F152A_XENLA UPF0326 protein FAM152A OS=Xenopus laevis
           GN=fam152a PE=2 SV=1
          Length = 192

 Score = 30.8 bits (68), Expect = 4.5
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 161 EKQISQTGEKRLPSAYFLIQSNVSTFSSEKSELNCG 268
           EK I + G++   +AY L+  N + FSS  SE+ CG
Sbjct: 85  EKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 120


>sp|Q5XIT6|F152A_RAT UPF0326 protein FAM152A OS=Rattus norvegicus
           GN=Fam152a PE=2 SV=1
          Length = 194

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 161 EKQISQTGEKRLPSAYFLIQSNVSTFSSEKSELNCG 268
           EK + + G++   +AY L+  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121


>sp|Q5R456|F152A_PONAB UPF0326 protein FAM152A OS=Pongo abelii
           GN=FAM152A PE=2 SV=1
          Length = 194

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 161 EKQISQTGEKRLPSAYFLIQSNVSTFSSEKSELNCG 268
           EK + + G++   +AY L+  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121


>sp|A3QRX8|F152A_PIG UPF0326 protein FAM152A OS=Sus scrofa
           GN=FAM152A PE=2 SV=1
          Length = 194

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 161 EKQISQTGEKRLPSAYFLIQSNVSTFSSEKSELNCG 268
           EK + + G++   +AY L+  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121


>sp|Q9D291|F152A_MOUSE UPF0326 protein FAM152A OS=Mus musculus
           GN=Fam152a PE=2 SV=1
          Length = 194

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 161 EKQISQTGEKRLPSAYFLIQSNVSTFSSEKSELNCG 268
           EK + + G++   +AY L+  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121


>sp|Q9BSY9|F152A_HUMAN UPF0326 protein FAM152A OS=Homo sapiens
           GN=FAM152A PE=2 SV=1
          Length = 194

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 161 EKQISQTGEKRLPSAYFLIQSNVSTFSSEKSELNCG 268
           EK + + G++   +AY L+  N + FSS  SE+ CG
Sbjct: 86  EKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCG 121


>sp|Q5ZIV7|F152A_CHICK UPF0326 protein FAM152A OS=Gallus gallus
           GN=FAM152A PE=2 SV=1
          Length = 193

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 161 EKQISQTGEKRLPSAYFLIQSNVSTFSSEKSELNCG 268
           EK + + G++   +AY L+  N + FSS  SE+ CG
Sbjct: 85  EKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCG 120
tr_hit_id O73655
Definition tr|O73655|O73655_FUGRU Pheromone receptor (Fragment) OS=Fugu rubripes
Align length 101
Score (bit) 38.1
E-value 0.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913634|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_E02.
         (542 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O73655|O73655_FUGRU Pheromone receptor (Fragment) OS=Fugu rub...    38   0.30 
tr|B6HCE0|B6HCE0_PENCH Pc18g05940 protein OS=Penicillium chrysog...    35   2.6  
tr|Q8DAS5|Q8DAS5_VIBVU ATP-dependent helicase OS=Vibrio vulnific...    34   4.4  
tr|Q7MJ34|Q7MJ34_VIBVY ATP-dependent helicase, DinG family OS=Vi...    34   4.4  
tr|A3ZML6|A3ZML6_9PLAN Putative sodium/myo-inositol cotransporte...    34   5.7  
tr|Q5TMM4|Q5TMM4_ANOGA AGAP011766-PA (Fragment) OS=Anopheles gam...    33   7.4  
tr|B4F8X0|B4F8X0_MAIZE Protein binding protein OS=Zea mays PE=2 ...    33   9.7  
tr|A6RHV2|A6RHV2_BOTFB Predicted protein OS=Botryotinia fuckelia...    33   9.7  

>tr|O73655|O73655_FUGRU Pheromone receptor (Fragment) OS=Fugu
           rubripes GN=Ca10 PE=4 SV=1
          Length = 251

 Score = 38.1 bits (87), Expect = 0.30
 Identities = 28/101 (27%), Positives = 50/101 (49%)
 Frame = -3

Query: 426 LVMMH*EKHGSMCTAAHGGIVNMSNVVLYLSTVQLSEAVSKGTSYHIFVFFRFPQFSSDF 247
           L +    K G   T    G V     V+ L+++Q +  +S      I +   FP  ++ +
Sbjct: 91  LAVFRASKPGGGATLKWFGAVQQRMTVIILTSIQAAICLS-----WILLASPFPHKNTQY 145

Query: 246 SEEKVETFDCIKK*ALGSLFSPVWLICFSGVLPTLSFLVSF 124
           S E++  ++C    A+GS    + L+ + G+L TLSFL++F
Sbjct: 146 SNERI-IYEC----AVGSTVGFILLLSYIGLLATLSFLIAF 181


>tr|B6HCE0|B6HCE0_PENCH Pc18g05940 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc18g05940 PE=4 SV=1
          Length = 444

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 60  ALQGEEPWPSPLVNHQVIWPNRSSPKNSKLVKHQKNKSARRVK 188
           +L  E   P+P V    IWP R+ P N++ V+H ++ S  R K
Sbjct: 207 SLCSEFSTPAPWVEPDAIWPPRTIPSNTRTVRHLRDSSPPRPK 249


>tr|Q8DAS5|Q8DAS5_VIBVU ATP-dependent helicase OS=Vibrio vulnificus
           GN=VV1_2113 PE=4 SV=1
          Length = 703

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 392 IDPCFSQCIITKYHSCHSNIQIHRPCPIPLAQ 487
           ID    Q I++  HSC++N+ IHR CP   A+
Sbjct: 188 IDDSLWQLIVSDKHSCNNNLPIHRHCPFQKAR 219


>tr|Q7MJ34|Q7MJ34_VIBVY ATP-dependent helicase, DinG family
           OS=Vibrio vulnificus (strain YJ016) GN=VV2329 PE=4 SV=1
          Length = 703

 Score = 34.3 bits (77), Expect = 4.4
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 392 IDPCFSQCIITKYHSCHSNIQIHRPCPIPLAQ 487
           ID    Q I++  HSC++N+ IHR CP   A+
Sbjct: 188 IDDSLWQLIVSDKHSCNNNLPIHRHCPFQKAR 219


>tr|A3ZML6|A3ZML6_9PLAN Putative sodium/myo-inositol cotransporter
           OS=Blastopirellula marina DSM 3645 GN=DSM3645_00705 PE=3
           SV=1
          Length = 561

 Score = 33.9 bits (76), Expect = 5.7
 Identities = 15/26 (57%), Positives = 19/26 (73%)
 Frame = -2

Query: 148 NFEFFGELLFGQITWWLTNGEGHGSS 71
           +F FF  L+ G ITWWLT G+ HG+S
Sbjct: 9   SFVFFTALV-GVITWWLTRGDQHGTS 33


>tr|Q5TMM4|Q5TMM4_ANOGA AGAP011766-PA (Fragment) OS=Anopheles
           gambiae GN=AGAP011766 PE=3 SV=2
          Length = 445

 Score = 33.5 bits (75), Expect = 7.4
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +1

Query: 22  GSNTAYHKLHHYQHCREKNHGLHHWLTTK*SGQTEAHQKTQSW*NTRKT 168
           G+N   H  HH+ H  +  +G H       S  T A Q+ Q   N ++T
Sbjct: 385 GTNPPQHHHHHHHHSHDNKNGTHSLTNNNNSAATSAQQQQQQSINRKQT 433


>tr|B4F8X0|B4F8X0_MAIZE Protein binding protein OS=Zea mays PE=2
           SV=1
          Length = 526

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 383 AVHIDPCFSQCIITKYHSCHSNIQIHRPC--PIPLAQPMQH 499
           A H+DPC    +I    S H ++  H PC   +PL QP Q+
Sbjct: 189 AEHVDPCLRFVLIPAPVSAHHHVLGHYPCGRMLPLQQPCQY 229


>tr|A6RHV2|A6RHV2_BOTFB Predicted protein OS=Botryotinia fuckeliana
           (strain B05.10) GN=BC1G_00023 PE=4 SV=1
          Length = 198

 Score = 33.1 bits (74), Expect = 9.7
 Identities = 19/47 (40%), Positives = 24/47 (51%)
 Frame = +1

Query: 283 KDMIRSPFRDSLRQLNCRQIQHNIAHINDSPMSSCAHRPMLLSMHHH 423
           K M R+P   +LR L C  I  N+ H N SPM +       LS +HH
Sbjct: 65  KKMFRTPMASTLRSLQCNPISCNL-HCNTSPMPN-------LSTNHH 103