BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913637|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_E06.
         (503 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5XIE3|RM11_RAT 39S ribosomal protein L11, mitochondrial OS=R...    30   8.3  

>sp|Q5XIE3|RM11_RAT 39S ribosomal protein L11, mitochondrial
           OS=Rattus norvegicus GN=Mrpl11 PE=2 SV=1
          Length = 203

 Score = 29.6 bits (65), Expect = 8.3
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
 Frame = +3

Query: 141 IVGTKSLSTKVNLFCRKFKQQ*RTYQKGCKNDLMLFLKDGEHSSL----PVFSYNFTCSD 308
           I+G + +S  +N FC++F ++ +  ++G      +F+K      L    P  SY    + 
Sbjct: 38  ILGQRGVS--INQFCKEFNEKTKDIKEGIPLPTKIFIKPDRTFELKIGQPTISYFLKAAA 95

Query: 309 GASKGA 326
           G  KGA
Sbjct: 96  GIEKGA 101

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913637|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_E06.
         (503 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RMD5|A9RMD5_PHYPA Predicted protein OS=Physcomitrella paten...    34   0.26 
tr|A9NSJ9|A9NSJ9_PICSI Putative uncharacterized protein OS=Picea...    37   0.69 
tr|A7QI56|A7QI56_VITVI Chromosome chr17 scaffold_101, whole geno...    33   0.73 

>tr|A9RMD5|A9RMD5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_159959 PE=4 SV=1
          Length = 354

 Score = 33.9 bits (76), Expect(2) = 0.26
 Identities = 17/28 (60%), Positives = 20/28 (71%)
 Frame = +3

Query: 48  VAALSDRFCNKGILFIHFSARHTFEV*C 131
           V A +D+F NK ILFIHFSAR+  E  C
Sbjct: 306 VLAHADKFKNKDILFIHFSARYQQEDIC 333



 Score = 23.9 bits (50), Expect(2) = 0.26
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 188 EIQAAIKNLPKRLQERSYAFLEGW 259
           +I  AI+N+P  LQ R +A  EG+
Sbjct: 331 DICKAIENIPAPLQGRVHALTEGF 354


>tr|A9NSJ9|A9NSJ9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 291

 Score = 36.6 bits (83), Expect = 0.69
 Identities = 17/25 (68%), Positives = 19/25 (76%)
 Frame = +3

Query: 48  VAALSDRFCNKGILFIHFSARHTFE 122
           VAA +DRF NK IL IHFSAR+  E
Sbjct: 243 VAAFADRFQNKAILLIHFSARYRIE 267


>tr|A7QI56|A7QI56_VITVI Chromosome chr17 scaffold_101, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000101001
           PE=4 SV=1
          Length = 290

 Score = 33.5 bits (75), Expect(2) = 0.73
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +3

Query: 48  VAALSDRFCNKGILFIHFSARHT 116
           + + +DRF NK IL IHFSAR+T
Sbjct: 242 IVSYADRFQNKAILLIHFSARYT 264



 Score = 22.7 bits (47), Expect(2) = 0.73
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 188 EIQAAIKNLPKRLQERSYAFLEGW 259
           EIQ A+  LP  L  R +A  EG+
Sbjct: 267 EIQEAVSALPPPLGGRVFALTEGF 290