BP913652 |
Clone id |
YMU001_000032_G03 |
Library |
YMU01 |
Length |
586 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000032_G03. |
Accession |
BP913652 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ATAGCAAGGCAAGCAGATAATCTAAGCTGGTTAGTAGACATCATGATCGATAGACAGGTT GCTGATGATTTTGTTAGATTATGGGCATTCCATGCCGAATTTTCCTCATTGCATCGACGG GTTCCAGTCATCGTCAGGCGCTACGAAGTTAGTCGTATCATGGCCCGCTTGTGTGTAGCC CTTGGTAAGGGGCAGGTATTGGTTCCCAAAGAGGCGAGATATGCTCTCCTACACAATTGG TTGCAGCCCTTGATTGATGACTTTGGATGGATGCAAAGGGCTTGTAAGGGCCTTGACATG GATATGGTTGAGGAGGGGCTCTGCCAAACTATATTAACTCTTCCTCTGCAGCAACAGCAA ATAATCATGATGGCATGGTTTAAGAGGTTTTTGAAGAGTGGAGACGATTGTCCAAAATTG CAGAGAGCTTTCGAAATATGGTGGAGAAGGACATTTGCGAGGCCTTCAATGGAGCTAGCC ATTTCATGAATGGTAGTTGGTTGGGATGGTACTCTATTTCCTTTCTATAGGCTTGCACTA AGCAACAGTGTTCCACCATATGTGGCATGTCAACATGGATGGAGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q31JJ8 |
Definition |
sp|Q31JJ8|CMOB_THICR tRNA (mo5U34)-methyltransferase OS=Thiomicrospira crunogena (strain XCL-2) |
Align length |
83 |
Score (bit) |
35.0 |
E-value |
0.28 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RBR2 |
Definition |
tr|A9RBR2|A9RBR2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
153 |
Score (bit) |
192.0 |
E-value |
2.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913652|Adiantum capillus-veneris mRNA, clone: YMU001_000032_G03. (586 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RBR2|A9RBR2_PHYPA Predicted protein (Fragment) OS=Physcomit... 192 2e-47 tr|Q7X711|Q7X711_ORYSJ Os04g0579700 protein OS=Oryza sativa subs... 189 8e-47 tr|A2XWQ8|A2XWQ8_ORYSI Putative uncharacterized protein OS=Oryza... 189 8e-47 tr|A7QNK5|A7QNK5_VITVI Chromosome chr2 scaffold_132, whole genom... 186 6e-46 tr|Q9CAJ9|Q9CAJ9_ARATH Putative uncharacterized protein T12P18.1... 186 1e-45 tr|A9S6T8|A9S6T8_PHYPA Predicted protein (Fragment) OS=Physcomit... 184 2e-45 tr|Q6T282|Q6T282_9ROSI Predicted protein OS=Populus tremula x Po... 182 9e-45 tr|A7NZA6|A7NZA6_VITVI Chromosome chr6 scaffold_3, whole genome ... 177 4e-43 tr|Q9LVG9|Q9LVG9_ARATH Gb|AAF07368.1 (Putative uncharacterized p... 169 1e-40 tr|A7PV27|A7PV27_VITVI Chromosome chr4 scaffold_32, whole genome... 167 4e-40 tr|Q2QMP5|Q2QMP5_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 161 3e-38 tr|Q0IM59|Q0IM59_ORYSJ Os12g0596600 protein (Fragment) OS=Oryza ... 161 3e-38 tr|A3CJ37|A3CJ37_ORYSJ Putative uncharacterized protein OS=Oryza... 161 3e-38 tr|Q6Z4R8|Q6Z4R8_ORYSJ cDNA, clone: J065118J05, full insert sequ... 158 2e-37 tr|Q0D8W1|Q0D8W1_ORYSJ Os07g0123500 protein OS=Oryza sativa subs... 158 2e-37 tr|B8B6U8|B8B6U8_ORYSI Putative uncharacterized protein OS=Oryza... 158 2e-37 tr|A3BG61|A3BG61_ORYSJ Putative uncharacterized protein OS=Oryza... 158 2e-37 tr|Q9SVM0|Q9SVM0_ARATH Putative uncharacterized protein F18B3.60... 152 1e-35 tr|A2XMC4|A2XMC4_ORYSI Putative uncharacterized protein OS=Oryza... 151 3e-35 tr|Q75KA7|Q75KA7_ORYSJ Os03g0769400 protein OS=Oryza sativa subs... 150 5e-35 tr|A7QB57|A7QB57_VITVI Chromosome chr4 scaffold_73, whole genome... 147 3e-34 tr|Q9SKH2|Q9SKH2_ARATH Expressed protein (At2g13690) OS=Arabidop... 145 1e-33 tr|Q7XLJ0|Q7XLJ0_ORYSA OSJNBa0009K15.20 protein OS=Oryza sativa ... 145 1e-33 tr|Q7FM55|Q7FM55_ARATH Putative f13j11 PRLI-interacting factor G... 145 1e-33 tr|Q0JEG7|Q0JEG7_ORYSJ Os04g0278000 protein OS=Oryza sativa subs... 145 1e-33 tr|A3ARV9|A3ARV9_ORYSJ Putative uncharacterized protein OS=Oryza... 145 1e-33 tr|Q9FUB3|Q9FUB3_ARATH PRLI-interacting factor G (Fragment) OS=A... 145 2e-33 tr|Q8LDX9|Q8LDX9_ARATH Putative uncharacterized protein OS=Arabi... 145 2e-33 tr|B8ARM6|B8ARM6_ORYSI Putative uncharacterized protein OS=Oryza... 144 3e-33 tr|A3BIE6|A3BIE6_ORYSJ Putative uncharacterized protein OS=Oryza... 137 6e-31
>tr|A9RBR2|A9RBR2_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_50789 PE=4 SV=1 Length = 440
Score = 192 bits (487), Expect = 2e-47 Identities = 88/153 (57%), Positives = 111/153 (72%), Gaps = 1/153 (0%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 I+RQADNL WLVDI+IDR++ADDFVR+WA AE ++LH +VPV+ R YEVSR+ ARLC+A Sbjct: 289 ISRQADNLHWLVDILIDRRIADDFVRMWAHQAELANLHAKVPVMFR-YEVSRLTARLCIA 347
Query: 181 LGKGQVLVPK-EARYALLHNWLQPLIDDFGWMQRACKGLDMDMVEEGLCXXXXXXXXXXX 357 +GKGQ + R+ LL WLQPL+DDF WMQR C+ LD +VEEG+ Sbjct: 348 IGKGQARQSNLDVRFLLLQTWLQPLVDDFAWMQRCCRSLDKKVVEEGISQTILTLPLKQQ 407
Query: 358 XXXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTF 456 +++WF RF SGDDCP LQ+AFE+WWRRTF Sbjct: 408 QSILLSWFDRFSSSGDDCPNLQKAFEVWWRRTF 440
>tr|Q7X711|Q7X711_ORYSJ Os04g0579700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0064M23.3 PE=4 SV=2 Length = 533
Score = 189 bits (481), Expect = 8e-47 Identities = 84/152 (55%), Positives = 108/152 (71%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 IARQADNL W++DI+++RQ+A+DF+R WA E + LH +VP I RYEVSR+ ARL V Sbjct: 361 IARQADNLHWMLDILVERQIAEDFLRTWAMQIELAELHGKVPAI-HRYEVSRVTARLFVG 419
Query: 181 LGKGQVLVPKEARYALLHNWLQPLIDDFGWMQRACKGLDMDMVEEGLCXXXXXXXXXXXX 360 +GKGQ+LV KE R LL WL+P +DFGWM+RACKGLD ++E+GL Sbjct: 420 VGKGQILVSKEVRCQLLSTWLEPFYEDFGWMRRACKGLDRHLIEDGLANTILTLPLATQQ 479
Query: 361 XXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTF 456 ++AWF RFL SG+DCP +QR FE+WWRR F Sbjct: 480 EILLAWFNRFLNSGEDCPNIQRGFEVWWRRAF 511
>tr|A2XWQ8|A2XWQ8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_17091 PE=4 SV=1 Length = 533
Score = 189 bits (481), Expect = 8e-47 Identities = 84/152 (55%), Positives = 108/152 (71%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 IARQADNL W++DI+++RQ+A+DF+R WA E + LH +VP I RYEVSR+ ARL V Sbjct: 361 IARQADNLHWMLDILVERQIAEDFLRTWAMQIELAELHGKVPAI-HRYEVSRVTARLFVG 419
Query: 181 LGKGQVLVPKEARYALLHNWLQPLIDDFGWMQRACKGLDMDMVEEGLCXXXXXXXXXXXX 360 +GKGQ+LV KE R LL WL+P +DFGWM+RACKGLD ++E+GL Sbjct: 420 VGKGQILVSKEVRCQLLSTWLEPFYEDFGWMRRACKGLDRHLIEDGLANTILTLPLATQQ 479
Query: 361 XXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTF 456 ++AWF RFL SG+DCP +QR FE+WWRR F Sbjct: 480 EILLAWFNRFLNSGEDCPNIQRGFEVWWRRAF 511
>tr|A7QNK5|A7QNK5_VITVI Chromosome chr2 scaffold_132, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002563001 PE=4 SV=1 Length = 522
Score = 186 bits (473), Expect = 6e-46 Identities = 87/154 (56%), Positives = 108/154 (70%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 IARQADNL W++DI+IDRQ+A+DF++ WA +E S H +VPV V RYEVSR+ ARL V Sbjct: 349 IARQADNLHWILDILIDRQIAEDFLKTWASQSELSHAHSKVPV-VHRYEVSRVTARLFVG 407
Query: 181 LGKGQVLVPKEARYALLHNWLQPLIDDFGWMQRACKGLDMDMVEEGLCXXXXXXXXXXXX 360 +GKGQ+L K+AR LL WL P DDFGWM+RA KGLD +VE+GL Sbjct: 408 IGKGQLLASKDARCLLLQTWLVPFYDDFGWMRRASKGLDRHLVEDGLSNTILTLPLAWQQ 467
Query: 361 XXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTFAR 462 ++AWF RFL SG+DCP +QR FE+WWRR F R Sbjct: 468 EILLAWFDRFLNSGEDCPNIQRGFEVWWRRAFWR 501
>tr|Q9CAJ9|Q9CAJ9_ARATH Putative uncharacterized protein T12P18.13 OS=Arabidopsis thaliana GN=At1g63850 PE=4 SV=1 Length = 548
Score = 186 bits (471), Expect = 1e-45 Identities = 84/154 (54%), Positives = 108/154 (70%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 IARQADNL W++DI+IDRQ+A+DF+ +WA +E S +H +VPV V R+E+SR+ AR+ V Sbjct: 375 IARQADNLHWILDILIDRQIAEDFIVMWASLSELSEVHSKVPV-VHRFEISRVTARIFVG 433
Query: 181 LGKGQVLVPKEARYALLHNWLQPLIDDFGWMQRACKGLDMDMVEEGLCXXXXXXXXXXXX 360 +GKGQ+L PKE R LL NWL P DDFGWM+RA KGLD ++E+GL Sbjct: 434 IGKGQILTPKEVRCLLLRNWLTPFYDDFGWMRRASKGLDRYLIEDGLSNTILTLPLAWQQ 493
Query: 361 XXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTFAR 462 +AWF RFL S +DCP +QR FE+WWRR F R Sbjct: 494 EFFLAWFDRFLNSNEDCPNIQRGFEVWWRRAFWR 527
>tr|A9S6T8|A9S6T8_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42628 PE=4 SV=1 Length = 439
Score = 184 bits (468), Expect = 2e-45 Identities = 85/152 (55%), Positives = 107/152 (70%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 I+RQADNL WLVDI++DR++ADDFVR+WA E ++LH +VPV+ R YEVSR+ ARL Sbjct: 289 ISRQADNLHWLVDILVDRRIADDFVRMWAHQGELATLHAQVPVMFR-YEVSRLTARLLWV 347
Query: 181 LGKGQVLVPKEARYALLHNWLQPLIDDFGWMQRACKGLDMDMVEEGLCXXXXXXXXXXXX 360 QVL PK+ R+ LL WLQPL+DDF WMQR C+ LD +VEEG+ Sbjct: 348 RLDKQVLSPKDVRFLLLQTWLQPLVDDFAWMQRCCRNLDKKVVEEGISQTILTLPLKQQQ 407
Query: 361 XXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTF 456 +++WF RF SGDDCP LQ+AFE+WWRRTF Sbjct: 408 CILLSWFDRFSSSGDDCPNLQKAFEVWWRRTF 439
>tr|Q6T282|Q6T282_9ROSI Predicted protein OS=Populus tremula x Populus alba PE=2 SV=1 Length = 533
Score = 182 bits (463), Expect = 9e-45 Identities = 84/158 (53%), Positives = 108/158 (68%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 +ARQADNL W++DI+IDRQ+A++F++ WA +E S +H ++P V RY VSR+ ARL V Sbjct: 360 VARQADNLHWILDILIDRQIAEEFLKTWASQSELSDVHSKIPA-VHRYGVSRVTARLFVG 418
Query: 181 LGKGQVLVPKEARYALLHNWLQPLIDDFGWMQRACKGLDMDMVEEGLCXXXXXXXXXXXX 360 +GKGQ+L KEAR LL WL P DDFGWM+RA KGLD ++E+GL Sbjct: 419 IGKGQLLASKEARCLLLQTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLAWQQ 478
Query: 361 XXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTFARPSME 474 +AWF RFL SG+DCP +QR FE+WWRR F R S E Sbjct: 479 DIFLAWFDRFLNSGEDCPNIQRGFEVWWRRAFWRRSGE 516
>tr|A7NZA6|A7NZA6_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024438001 PE=4 SV=1 Length = 499
Score = 177 bits (449), Expect = 4e-43 Identities = 74/154 (48%), Positives = 110/154 (71%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 IAR+ADN+ W+V+I+ID+++ +DFV+LWA E + LH ++P + R +E+S+I A+LC+A Sbjct: 327 IAREADNMQWIVNILIDKKMGEDFVKLWADQKELAVLHSKIPTMYR-HEISKITAQLCIA 385
Query: 181 LGKGQVLVPKEARYALLHNWLQPLIDDFGWMQRACKGLDMDMVEEGLCXXXXXXXXXXXX 360 +G+G +LVPK+ R++LL WL+ L +DF WM+RAC+ +D +VE+GL Sbjct: 386 IGRGHLLVPKDTRFSLLSTWLEALYEDFAWMRRACRSVDKKLVEDGLSQTILTLPLPQQQ 445
Query: 361 XXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTFAR 462 ++ WF RFL GDDCP +QRAFE+WWRR F R Sbjct: 446 AILLTWFDRFLNKGDDCPNIQRAFEVWWRRAFIR 479
>tr|Q9LVG9|Q9LVG9_ARATH Gb|AAF07368.1 (Putative uncharacterized protein At5g60050) (Putative uncharacterized protein At5g60050/mgo3_20) OS=Arabidopsis thaliana GN=At5g60050/mgo3_20 PE=2 SV=1 Length = 499
Score = 169 bits (428), Expect = 1e-40 Identities = 74/155 (47%), Positives = 110/155 (70%), Gaps = 1/155 (0%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 IAR+ADN+ W+VDI+I++++ +FV+LWA E ++LH ++P + R +E+S+I A++CV Sbjct: 330 IAREADNMLWMVDILIEKKLCSEFVKLWADQKELANLHSKIPTMYR-HEISKITAQICVG 388
Query: 181 LGKGQVLVPKEARYALLHNWLQPLIDDFGWMQR-ACKGLDMDMVEEGLCXXXXXXXXXXX 357 +GKG++LV +E R+A+L+ WL+ L DDFGWM+R + + LD +VE+GL Sbjct: 389 IGKGRILVNRETRFAVLNTWLEALYDDFGWMRRLSSRSLDRKLVEDGLSQTILTLSLRQQ 448
Query: 358 XXXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTFAR 462 +M WF RFL GDDCP +QRAFE+WWRR F R Sbjct: 449 QVILMKWFDRFLSKGDDCPNVQRAFEVWWRRAFIR 483
>tr|A7PV27|A7PV27_VITVI Chromosome chr4 scaffold_32, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025023001 PE=4 SV=1 Length = 524
Score = 167 bits (423), Expect = 4e-40 Identities = 77/158 (48%), Positives = 105/158 (66%) Frame = +1
Query: 1 IARQADNLSWLVDIMIDRQVADDFVRLWAFHAEFSSLHRRVPVIVRRYEVSRIMARLCVA 180 I +ADNLSWL++I+ DRQ AD+F +WA E ++LH ++PV V R+ VS I ARL V Sbjct: 362 ITLEADNLSWLLEILADRQAADEFAVMWASQQELATLHTKLPV-VSRHHVSCITARLFVG 420
Query: 181 LGKGQVLVPKEARYALLHNWLQPLIDDFGWMQRACKGLDMDMVEEGLCXXXXXXXXXXXX 360 +G+G++L K+ R LL WLQPLI+D+ W+Q C+ D +VEEG+ Sbjct: 421 IGRGELLPSKDTRQLLLQTWLQPLINDYSWLQHGCRSFDRKVVEEGIGRTILTLPLEDQQ 480
Query: 361 XXMMAWFKRFLKSGDDCPKLQRAFEIWWRRTFARPSME 474 ++AW FLK+GD+CP LQRAFE+WWRRTF RP +E Sbjct: 481 SILLAWLGSFLKAGDNCPNLQRAFEVWWRRTFVRPYVE 518
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