BP913664
Clone id YMU001_000032_H05
Library
Length 489
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000032_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGATATTACCTGCAGGTACTCATGAAATGTATGCATATTCTTTTGCTTCGAGTGCTCGA
CAAAGAATGTTCTCACCTACGAGCGAAGCAACGTCCCAATTTAAATAAGCGTTCAACTTC
TTGTTGACACTGATGATGGAGAATACCATAACATGGATGACCATTTGAAAGTACAGATGG
TACACAGTCTCTCCCTTCTTGACCAAGCGCATACTTGAAATACATTTCTTCTCTAGGAAC
TCCTTCACTTTGGAAGCAACGTAACGTCAATGTCCGTCCCTCCGACAGACGCCATTACAC
TCAACTCGAACAACCTACCAAGCTTCTACGCTTCACGTCTTCTTCTCTCTTCTGCAGTTA
CTCGGGGTCTTTCCCTTCGACGATTCGACGGCTCGCTTGCAACCTCACGTACTCGCTTCT
TGAGAGAAGACATAATTGCCCCCTTGCCAACCAAATTCTAAACATTAACAACTACATGTG
GCGCTTCTT
■■Homology search results ■■ -
sp_hit_id Q86XK7
Definition sp|Q86XK7|VSIG1_HUMAN V-set and immunoglobulin domain-containing protein 1 OS=Homo sapiens
Align length 51
Score (bit) 31.2
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913664|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_H05.
(489 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q86XK7|VSIG1_HUMAN V-set and immunoglobulin domain-containing... 31 2.7
sp|P78963|SKB1_SCHPO Protein arginine N-methyltransferase skb1 O... 30 5.8
sp|Q45710|C14AA_BACTS Pesticidal crystal protein cry14Aa OS=Baci... 30 5.8
sp|Q6BH05|MED5_DEBHA Mediator of RNA polymerase II transcription... 30 7.6
sp|Q0A3Y1|HEMA_I80AD Hemagglutinin OS=Influenza A virus (strain ... 29 9.9

>sp|Q86XK7|VSIG1_HUMAN V-set and immunoglobulin domain-containing
protein 1 OS=Homo sapiens GN=VSIG1 PE=1 SV=1
Length = 387

Score = 31.2 bits (69), Expect = 2.7
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -1

Query: 291 RLSEGRTLTLRCFQSEGVPREEMYFKYALGQEGRDCVPSVLSNGHPCYGIL 139
R G T++L C + G P +Y+ + L EGRD VP V N +P GIL
Sbjct: 150 RPETGHTISLSCLSALGTP-SPVYYWHKL--EGRDIVP-VKENFNPTTGIL 196


>sp|P78963|SKB1_SCHPO Protein arginine N-methyltransferase skb1
OS=Schizosaccharomyces pombe GN=skb1 PE=2 SV=2
Length = 645

Score = 30.0 bits (66), Expect = 5.8
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2

Query: 203 PSAYLKYISSLGTPSLWKQ-RNVNVRPSDRRHYTQL 307
PS+Y+ Y++ + +P LW + RN+N + R Y L
Sbjct: 453 PSSYISYVTPIMSPKLWSEARNMNDPNAFERQYVVL 488


>sp|Q45710|C14AA_BACTS Pesticidal crystal protein cry14Aa OS=Bacillus
thuringiensis subsp. sotto GN=cry14Aa PE=2 SV=1
Length = 1186

Score = 30.0 bits (66), Expect = 5.8
Identities = 21/89 (23%), Positives = 40/89 (44%)
Frame = +3

Query: 123 VDTDDGEYHNMDDHLKVQMVHSLSLLDQAHT*NTFLL*ELLHFGSNVTSMSVPPTDAITL 302
+D GEYH ++ +K + H+ + LD+ + L HF +N+ V + +
Sbjct: 1033 IDHLPGEYHEIEQKMKEALKHAFTQLDEKN------LIHNGHFATNLIDWQVEGDARMKV 1086

Query: 303 NSNNLPSFYASRLLLSSAVTRGLSLRRFD 389
NN + S S+V++ + + FD
Sbjct: 1087 LENNALALQLSN--WDSSVSQSIDILEFD 1113


>sp|Q6BH05|MED5_DEBHA Mediator of RNA polymerase II transcription
subunit 5 OS=Debaryomyces hansenii GN=NUT1 PE=3 SV=2
Length = 990

Score = 29.6 bits (65), Expect = 7.6
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = -2

Query: 176 LYFQMVIHVMVFSIISVNKKLNAYLNWDVASLVGENI 66
L+FQ+V+ + SIIS KKLN NW+ ++L+ + I
Sbjct: 739 LFFQIVLKISGNSIISTLKKLN---NWENSNLIKDII 772


>sp|Q0A3Y1|HEMA_I80AD Hemagglutinin OS=Influenza A virus (strain
A/Gull/Minnesota/945/1980 H13N6) GN=HA PE=3 SV=1
Length = 566

Score = 29.3 bits (64), Expect = 9.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3

Query: 9 TCRYS*NVCIFFCFECSTKNVLTYERSNVPI*ISVQLLVDTDDGEYHNMD 158
TC + +C+ + ST+ V T S+VP+ S+ L+ G Y ++D
Sbjct: 14 TCVQADRICVGYLSTNSTEKVDTLLESDVPVTSSIDLVETNHTGTYCSLD 63


tr_hit_id B6MEL1
Definition tr|B6MEL1|B6MEL1_BRAFL Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae
Align length 110
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913664|Adiantum capillus-veneris mRNA, clone:
YMU001_000032_H05.
(489 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B6MEL1|B6MEL1_BRAFL Putative uncharacterized protein (Fragmen... 35 2.4
tr|A3USD9|A3USD9_VIBSP Putative uncharacterized protein OS=Vibri... 35 2.5
tr|Q4XLB1|Q4XLB1_PLACH Putative uncharacterized protein OS=Plasm... 34 3.2
tr|Q7RLD7|Q7RLD7_PLAYO Putative uncharacterized protein PY02609 ... 34 4.2
tr|A5E0N6|A5E0N6_LODEL Putative uncharacterized protein OS=Lodde... 34 4.2

>tr|B6MEL1|B6MEL1_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_81487 PE=4 SV=1
Length = 3938

Score = 34.7 bits (78), Expect = 2.4
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = -1

Query: 456 IWLARGQLCLLSRSEYVRLQASRRIVEGKDPE*LQK----REEDVKRRSLVGCS-S*V*W 292
+WLA LC+L + RL + + + G D + QK EE +K GC + + W
Sbjct: 3752 LWLALASLCVLDQDHVERLSSGQWV--GTDGQPKQKVFKEEEESIKVDLHEGCGRTKLFW 3809

Query: 291 RLSEGRTLTLRCFQSEGVPREEMYFKYALGQEGRDCVPSVLSNGHPCYGI 142
++ + TL+ E R ++ + + R+ L GHPC G+
Sbjct: 3810 VMALADSKTLKA-MVEFRERNGVHVTSLIQEHARNACTRTLPCGHPCGGV 3858


>tr|A3USD9|A3USD9_VIBSP Putative uncharacterized protein OS=Vibrio
splendidus 12B01 GN=V12B01_14861 PE=4 SV=1
Length = 320

Score = 34.7 bits (78), Expect = 2.5
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2

Query: 239 TPSLWKQRNVNVRPSDRRHYTQLEQPTKLLR 331
TP L ++ N+ +RP D RHY ++ Q +K+++
Sbjct: 226 TPMLGQKLNIKIRPRDYRHYLEIRQDSKMVK 256


>tr|Q4XLB1|Q4XLB1_PLACH Putative uncharacterized protein
OS=Plasmodium chabaudi GN=PC000292.05.0 PE=4 SV=1
Length = 588

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = -2

Query: 263 YVASKVKEFLEKK--CISSMRLVKKGETVYHLYFQMVIHVMVFSIISVNKKLNAYLNWDV 90
Y+ S +K L + C S +V +YHL + + +S + +N+ LN +N +V
Sbjct: 112 YLLSILKFILNNRNICTSQENIVDIFSFLYHLLYNEKNMIHSYSCLCINRLLNCQINKEV 171

Query: 89 ASLVGENILCRAL 51
L+ +N++ L
Sbjct: 172 LDLIYQNVIINIL 184


>tr|Q7RLD7|Q7RLD7_PLAYO Putative uncharacterized protein PY02609
OS=Plasmodium yoelii yoelii GN=PY02609 PE=4 SV=1
Length = 779

Score = 33.9 bits (76), Expect = 4.2
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = -2

Query: 263 YVASKVKEFLEKKCISSMRLVKKGETVYHLYFQMVIHVMVFSIISVNKKLNAYLNWD 93
+V +K+KE KK IS L KK +T+ +YF I +++ I N+ ++ + NWD
Sbjct: 35 WVKNKIKE---KKKISLFNLKKKKKTINIIYF---ITILILLNIIYNRLIDIWYNWD 85


>tr|A5E0N6|A5E0N6_LODEL Putative uncharacterized protein
OS=Lodderomyces elongisporus GN=LELG_03173 PE=4 SV=1
Length = 923

Score = 33.9 bits (76), Expect = 4.2
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +3

Query: 252 GSNVTSMSVPPTDAITLNSN--NLPSFYASRLLLSSAVTRGLSLRR--FDGSLATSRTRF 419
G N TS+SVP A T NS+ N +S LS+ +RG SL+R D SL T T+
Sbjct: 700 GDNFTSLSVPKPPAPTFNSSSANTLKNVSSHTSLSAKASRGNSLKRTTTDVSLLTGDTQS 759

Query: 420 L 422
L
Sbjct: 760 L 760