BP913670 |
Clone id |
YMU001_000033_A01 |
Library |
YMU01 |
Length |
417 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000033_A01. |
Accession |
BP913670 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1317Contig1 |
Sequence |
CTCTCTTGCTTCCAAACGTTCCATCCGCACATTTGGCCCCAATCGGGCCCCCTCAGGTCT TGTCATCGTCGGACCCTCCCATCACAAAGGTTCTACCACCTGAGTTAGCAGAAAAGCTTG TTCAAGCTCTCACTGCTCGGCATCAGCTCTTATCAAGTAAATCCCCTGCTTGTGATGGTG ACCACTCTCACCGAAGACCACCAAGAGGACATCAAGAAACTCCTGGACCTTTTGCTAGAG GAGGCCTACATCCGCCCGTCCCGGAGGTTCAATGTGGCACAAGCCAAGGAGATGCTAATG CTAGCCGCCGACAAGCTTCAGAAGGACATGAAGATTACCAGCGATTAGATCACCATCTAT AGGGTTAAAAAAGATATCCTCAAGGACTCTAAGCACTTCTACGATCGAGCTCACTCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O95402 |
Definition |
sp|O95402|MED26_HUMAN Mediator of RNA polymerase II transcription subunit 26 OS=Homo sapiens |
Align length |
104 |
Score (bit) |
35.4 |
E-value |
0.09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5JL80 |
Definition |
tr|Q5JL80|Q5JL80_ORYSJ Putative uncharacterized protein OSJNBa0047D12.24 OS=Oryza sativa subsp. japonica |
Align length |
106 |
Score (bit) |
39.3 |
E-value |
0.099 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913670|Adiantum capillus-veneris mRNA, clone: YMU001_000033_A01. (417 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5JL80|Q5JL80_ORYSJ Putative uncharacterized protein OSJNBa00... 39 0.099 tr|A3AYC3|A3AYC3_ORYSJ Putative uncharacterized protein OS=Oryza... 38 0.22 tr|B6QD30|B6QD30_PENMA Putative uncharacterized protein OS=Penic... 38 0.29 tr|Q60B16|Q60B16_METCA TonB domain protein OS=Methylococcus caps... 37 0.38 tr|A4QN94|A4QN94_XENTR LOC100125119 protein (Fragment) OS=Xenopu... 36 0.84 tr|Q7PTE3|Q7PTE3_ANOGA AGAP006901-PA OS=Anopheles gambiae GN=AGA... 36 0.84 tr|Q23G58|Q23G58_TETTH Putative uncharacterized protein OS=Tetra... 36 1.1 tr|B2R9G9|B2R9G9_HUMAN cDNA, FLJ94385, highly similar to Homo sa... 35 1.4 tr|Q5AZW6|Q5AZW6_EMENI Putative uncharacterized protein OS=Emeri... 35 1.4 tr|B8MC58|B8MC58_9EURO Putative uncharacterized protein OS=Talar... 35 1.4 tr|Q8JY97|Q8JY97_SHV1 Protease OS=Saimiriine herpesvirus 1 (stra... 35 1.9 tr|Q8JY96|Q8JY96_SHV1 UL26.5 OS=Saimiriine herpesvirus 1 (strain... 35 1.9 tr|Q298H5|Q298H5_DROPS GA21922 OS=Drosophila pseudoobscura pseud... 35 1.9 tr|B3DKI7|B3DKI7_DANRE Axin 2 (Conductin, axil) OS=Danio rerio G... 35 2.4 tr|Q7XE43|Q7XE43_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 35 2.4 tr|B8BH29|B8BH29_ORYSI Putative uncharacterized protein OS=Oryza... 35 2.4 tr|A3C537|A3C537_ORYSJ Putative uncharacterized protein OS=Oryza... 35 2.4 tr|Q1DZA2|Q1DZA2_COCIM Putative uncharacterized protein OS=Cocci... 34 3.2 tr|A8PCZ1|A8PCZ1_COPC7 Predicted protein OS=Coprinopsis cinerea ... 34 3.2 tr|A8P6U6|A8P6U6_COPC7 Predicted protein OS=Coprinopsis cinerea ... 34 3.2 tr|Q2Q0C3|Q2Q0C3_9ZZZZ Putative uncharacterized protein OS=uncul... 34 4.1 tr|Q3TMB5|Q3TMB5_MOUSE Putative uncharacterized protein OS=Mus m... 34 4.1 tr|B2RS30|B2RS30_MOUSE Thyroid hormone receptor interactor 6 OS=... 34 4.1 tr|Q0RDQ3|Q0RDQ3_FRAAA Putative peptidase (Partial match) OS=Fra... 34 4.1 tr|B6T081|B6T081_MAIZE Putative uncharacterized protein OS=Zea m... 34 4.1 tr|Q5C7Z9|Q5C7Z9_SCHJA SJCHGC02128 protein (Fragment) OS=Schisto... 34 4.1 tr|B0WIK0|B0WIK0_CULQU Putative uncharacterized protein OS=Culex... 34 4.1 tr|Q0UN06|Q0UN06_PHANO Putative uncharacterized protein OS=Phaeo... 34 4.1 tr|Q0U8T6|Q0U8T6_PHANO Putative uncharacterized protein OS=Phaeo... 34 4.1 tr|Q5VNW7|Q5VNW7_ORYSJ Putative uncharacterized protein P0039G05... 33 5.4
>tr|Q5JL80|Q5JL80_ORYSJ Putative uncharacterized protein OSJNBa0047D12.24 OS=Oryza sativa subsp. japonica GN=OSJNBa0047D12.24 PE=4 SV=1 Length = 244
Score = 39.3 bits (90), Expect = 0.099 Identities = 35/106 (33%), Positives = 45/106 (42%), Gaps = 4/106 (3%) Frame = +3
Query: 21 PSAHLA---PIGPPQVLSSSDPPITKVLP-PELAEKLVQALTARHQLLSSKSPACDGDHS 188 PSA+LA P PP +S PP + +LP P +A L + PA D Sbjct: 17 PSANLARRRPHAPPPHSTSEPPPSSPLLPRPGVALMGASCLAVAGRRSPCARPAPDRLSF 76
Query: 189 HRRPPRGHQETPGPFARGGLHPPVPEVQCGTSQGDANASRRQASEG 326 P R TP P AR L P PE + A A+ RQ ++G Sbjct: 77 SGPPRRPSAITPSPCAR--LDTPTPEYHATAPRQPATATGRQRADG 120
>tr|A3AYC3|A3AYC3_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_015795 PE=4 SV=1 Length = 234
Score = 38.1 bits (87), Expect = 0.22 Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Frame = +3
Query: 63 SSSDPPITKVL-----PPELAEKLVQALTARHQLLSSKSPACDGDHSHRRPPRGHQETPG 227 S S P TK L PP A + A+ + +++PA DGD + +RP G P Sbjct: 17 SPSSKPKTKALSHSTEPPLSASSAPRRAAAKDAKIGTETPAADGDAARKRPSAGDAPAPA 76
Query: 228 PFARGGLHPPVPEVQCGTSQGDANASRRQASEGH 329 P A H P P + + S GH Sbjct: 77 PLA-DKRHRPNPPSSGSRDRDRHHRHGHSHSHGH 109
>tr|B6QD30|B6QD30_PENMA Putative uncharacterized protein OS=Penicillium marneffei ATCC 18224 GN=PMAA_087070 PE=4 SV=1 Length = 531
Score = 37.7 bits (86), Expect = 0.29 Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 8/115 (6%) Frame = +3
Query: 12 PNVPSAHLAPIGPP--------QVLSSSDPPITKVLPPELAEKLVQALTARHQLLSSKSP 167 P+ P + P G P Q + S PP LPP A Q +H S P Sbjct: 45 PSGPPPYHRPYGSPYQDHPPPHQHSTGSLPP---PLPPAPAPHQYQQHQHQHLQPQSAPP 101
Query: 168 ACDGDHSHRRPPRGHQETPGPFARGGLHPPVPEVQCGTSQGDANASRRQASEGHE 332 + ++ P+ H + PGP +R HPP+ V TSQ D +R + E E Sbjct: 102 SQQHQQQQQQNPQQHTQQPGPPSRPPSHPPILPVPM-TSQLDQIEARLRQIEQEE 155
>tr|Q60B16|Q60B16_METCA TonB domain protein OS=Methylococcus capsulatus GN=MCA0668 PE=4 SV=1 Length = 193
Score = 37.4 bits (85), Expect = 0.38 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Frame = +3
Query: 21 PSAHLAPIGPPQVLSSSDP-PITKVLPPELAEKLVQALTARHQLLSSKSP----ACDGDH 185 P+A P+ PP+ + P P+ K LP L K + + + ++ S+ P A D Sbjct: 30 PTAPPKPVTPPRPKPVAKPKPVAKTLPRPLPVKPAEEASTQSEVSSAPPPESASAARPDG 89
Query: 186 SHRRPPRGHQETPGPFARGGLHPPVPE 266 P TP F+ LH PVPE Sbjct: 90 GAASAPAVPPSTPANFSANYLHNPVPE 116
>tr|A4QN94|A4QN94_XENTR LOC100125119 protein (Fragment) OS=Xenopus tropicalis GN=LOC100125119 PE=2 SV=1 Length = 2232
Score = 36.2 bits (82), Expect = 0.84 Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 10/100 (10%) Frame = +3
Query: 51 PQVLSSSDPPITKVLP--PELAEKL-VQALTARHQLLSSKSPACDGDHSHRRPPRGHQET 221 P V++ S P K +P PE + VQ+ T R + S + P GD PPR H+ + Sbjct: 1823 PPVVAQSHPVAIKEIPKTPERHRHVTVQSETIRSRAPSPRRPCQSGDGRFHLPPRVHRAS 1882
Query: 222 -PG-----PFARGGLH-PPVPEVQCGTSQGDANASRRQAS 320 PG P G H PP+P + S +A Q S Sbjct: 1883 DPGFPELVPIQDGYSHPPPIPRIMSPQSTSMQSAPHVQTS 1922
>tr|Q7PTE3|Q7PTE3_ANOGA AGAP006901-PA OS=Anopheles gambiae GN=AGAP006901 PE=4 SV=4 Length = 2116
Score = 36.2 bits (82), Expect = 0.84 Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 3/109 (2%) Frame = +3
Query: 18 VPSAHLAPIGPPQVLSSSDPPITKVLPPELAEKLVQALTARHQLLSSKSPACDGDHSHRR 197 +P + LA + PP +S PP+ +P + LV A A+ +++ +PA Sbjct: 589 LPVSPLAQVQPP----ASYPPVAGSVPTPFSAALVGAPPAQPTPMAAPAPA--------- 635
Query: 198 PPRGHQETPGPFARGGLHP---PVPEVQCGTSQGDANASRRQASEGHED 335 P P P A + P P P+ GT Q A + +EG D Sbjct: 636 -PMAAAPAPAPMAAPAMAPASVPTPQGYGGTEQEPAEHESEEKAEGEAD 683
>tr|Q23G58|Q23G58_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00077060 PE=4 SV=1 Length = 385
Score = 35.8 bits (81), Expect = 1.1 Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 2/117 (1%) Frame = +3
Query: 15 NVPSAHLAPIGPPQVLSSSDPPITKVLPPELAEKLVQALTARHQLLSSKSPACDGDHSHR 194 N+P A P P ++++ PP PP L +V A LS P G S Sbjct: 239 NIPPA---PTAPGIFVNNNAPPP----PPSLPGIVVNANAPPPPPLSLGLPGVPGGSSLP 291
Query: 195 RPPRGHQETPGP--FARGGLHPPVPEVQCGTSQGDANASRRQASEGHEDYQRLDHHL 359 PP + P P A GGL P P + Q DA A+ Q E + + LD ++ Sbjct: 292 PPPPPNMSLPPPPISAPGGLPIPPPPMAPAQVQSDAQAA-EQGQETAQPVEELDENM 347
>tr|B2R9G9|B2R9G9_HUMAN cDNA, FLJ94385, highly similar to Homo sapiens cofactor required for Sp1 transcriptional activation, subunit 7, 70kDa (CRSP7), mRNA OS=Homo sapiens PE=2 SV=1 Length = 600
Score = 35.4 bits (80), Expect = 1.4 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 1/104 (0%) Frame = +3
Query: 36 APIGPPQVLSSSDPPITKVLPPELAEKLVQALTARHQLLSSKSPACDGDHSHRRPPRGHQ 215 +P PQ L ++ P P LA+ + L S++SP C P HQ Sbjct: 299 SPSPRPQALDATQVPS----PLPLAQPSTPPVRRLELLPSAESPVC-----WLEQPESHQ 349
Query: 216 ETPGPFARGGLHPPVPEV-QCGTSQGDANASRRQASEGHEDYQR 344 GP + GL P P + + G S + A AS G D ++ Sbjct: 350 RLAGPGCKAGLSPAEPLLSRAGFSPDSSKADSDAASSGGSDSKK 393
>tr|Q5AZW6|Q5AZW6_EMENI Putative uncharacterized protein OS=Emericella nidulans GN=AN6164.2 PE=4 SV=1 Length = 2510
Score = 35.4 bits (80), Expect = 1.4 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 7/68 (10%) Frame = +3
Query: 36 APIGPPQVLSSSDPPITKVLP--PELAEKLVQALTARHQLLSSKSPACDGDHSHRRP--- 200 API Q LS+ I ++P P+L++ L+QAL+ H L K DHS P Sbjct: 359 APINGVQCLSAYTSNIAALIPRWPQLSQPLIQALSIVHDLAEPKD-----DHSGYGPDDQ 413
Query: 201 --PRGHQE 218 P GHQ+ Sbjct: 414 MVPHGHQQ 421
>tr|B8MC58|B8MC58_9EURO Putative uncharacterized protein OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_122370 PE=4 SV=1 Length = 490
Score = 35.4 bits (80), Expect = 1.4 Identities = 29/104 (27%), Positives = 39/104 (37%) Frame = +3
Query: 12 PNVPSAHLAPIGPPQVLSSSDPPITKVLPPELAEKLVQALTARHQLLSSKSPACDGDHSH 191 PNVP + AP GPP S P + PP A L P H + Sbjct: 36 PNVPGS-TAP-GPPPYHRSYGSPYSDHPPPHHAST---------GPLPPPLPPAPASHQY 84
Query: 192 RRPPRGHQETPGPFARGGLHPPVPEVQCGTSQGDANASRRQASE 323 + + H + PGP +R HPP+ V + A RQ + Sbjct: 85 QPQHQQHSQQPGPPSRPSSHPPLLPVPVASQLDQIEARLRQIEQ 128
|