BP913672 |
Clone id |
YMU001_000033_A03 |
Library |
YMU01 |
Length |
488 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000033_A03. |
Accession |
BP913672 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACTTTCCTTTTCTTTGGTTCAGGTGCAGCAGCTGATGCTCCATTAGTTGTGGTCCGAGC TGGACCACTTGTTTGGTTGTCTGCATCTAACTTTTTCTTTCCATTAGTAACCGTTCGAGC TGGCTCACTTGCTTGATTGTCTGCATCTAACTTTTTCTTTCCATTTTTCTTCTCTTTGTC TCTAACAGTGCAAATTGTATCCTCTTTCTCCTCCTTCAGATGTGCTTCAGATGCATGTGA CCTCTTTCCATTCTTGTCAGGTAAAACTGAGGTTTCCTTTTTCTCTTTAGGCACCTCTGG AGAAGACAAGCTAACGAAAGTCTCATCTGCATTGTCTTCATCTGAAATGTCATCATCAAC AACCATTCGCCTAGTTCGTTTGCCTTTACTCTTCAGGTCGCCTCTCCGTAGGCGTGCAAA ATTTGCAGCATCCTCATCGTCGCTACTTTCATTGATACAGGGATCATGCACCACTTCTGG AATCTCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8TBK6 |
Definition |
sp|Q8TBK6|ZCH10_HUMAN Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens |
Align length |
96 |
Score (bit) |
32.0 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4LBU3 |
Definition |
tr|B4LBU3|B4LBU3_DROVI GJ12538 OS=Drosophila virilis |
Align length |
104 |
Score (bit) |
35.4 |
E-value |
1.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913672|Adiantum capillus-veneris mRNA, clone: YMU001_000033_A03. (488 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4LBU3|B4LBU3_DROVI GJ12538 OS=Drosophila virilis GN=GJ12538 ... 35 1.4 tr|A2R6X1|A2R6X1_ASPNC Contig An16c0060, complete genome OS=Aspe... 35 2.5 tr|B3ENF9|B3ENF9_CHLPB Putative uncharacterized protein OS=Chlor... 33 7.2 tr|B8HA23|B8HA23_9MICC Ribonuclease, Rne/Rng family OS=Arthrobac... 33 7.2 tr|Q2TBL3|Q2TBL3_BOVIN Zinc finger, CCHC domain containing 10 OS... 33 7.2 tr|A7E3S6|A7E3S6_BOVIN Zinc finger, CCHC domain containing 10 (F... 33 7.2 tr|A7PY21|A7PY21_VITVI Chromosome chr15 scaffold_37, whole genom... 33 9.3
>tr|B4LBU3|B4LBU3_DROVI GJ12538 OS=Drosophila virilis GN=GJ12538 PE=4 SV=1 Length = 1083
Score = 35.4 bits (80), Expect = 1.4 Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 1/104 (0%) Frame = -3
Query: 312 SLSSPEVPKEKKETSVLPDKNGKRSHASEAHLKEEKEDTICTVRDXXXXXXXXKLDADNQ 133 S +SPE K+KK+ S K K K D+I + +D DA+ Q Sbjct: 238 SSASPERRKDKKKKSKKHKKESKSKKKKSRKRKYSGSDSIDSDKDSEDESDSS--DAERQ 295
Query: 132 ASEPARTVTNGKKKLDADNQTSGPAR-TTTNGASAAAPEPKKRK 4 + KKK D + + AR ++T+ A + +P PK +K Sbjct: 296 LKSARKKAKKEKKKRDKKLKKNQRARASSTDSARSNSPAPKDKK 339
>tr|A2R6X1|A2R6X1_ASPNC Contig An16c0060, complete genome OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An16g01500 PE=4 SV=1 Length = 762
Score = 34.7 bits (78), Expect = 2.5 Identities = 31/136 (22%), Positives = 46/136 (33%) Frame = -3
Query: 441 DDEDAANFARLRRGDLKSKGKRTRRMVVXXXXXXXXXXDETFVSLSSPEVPKEKKETSVL 262 D+EDAA AR R L+ KG + + L+ P K K E+S Sbjct: 643 DEEDAARIARAERNRLRRKGLNPKAI------------------LNKPAKSKSKDESSAP 684
Query: 261 PDKNGKRSHASEAHLKEEKEDTICTVRDXXXXXXXXKLDADNQASEPARTVTNGKKKLDA 82 +K ++ E K E + + +EP+ T +K A Sbjct: 685 TEKTEEKEKKKEESPKRETPAKKESKESPKPKADSKPTKTKTETAEPSTTKKQQQKPTTA 744
Query: 81 DNQTSGPARTTTNGAS 34 T +TT AS Sbjct: 745 QEPTEKKKKTTAKKAS 760
>tr|B3ENF9|B3ENF9_CHLPB Putative uncharacterized protein OS=Chlorobium phaeobacteroides (strain BS1) GN=Cphamn1_0735 PE=4 SV=1 Length = 1122
Score = 33.1 bits (74), Expect = 7.2 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 9/135 (6%) Frame = -1
Query: 392 RVKANELGEWLLMMTFQMKTMQMRLSLACLLQRCLKRKRKPQFYLTRMERGHMHLKHIXX 213 R K +ELGE + +MK MQ Q LK + L+R++ + + Sbjct: 638 RQKRDELGE----LNHRMKVMQQE-------QSTLKERIT---ILSRLDE-YPDFHDLDW 682
Query: 212 XXXRIQFALLETKRRKMERKS*-MQTI--------KQVSQLERLLMERKS*MQTTKQVVQ 60 + A LE ++R++E S ++T+ K + + ERLL ERK TK+ + Sbjct: 683 QPVAVAIARLEAEKRELESTSDKLRTLTMQLDEVEKGLEKTERLLDERKDKRSRTKEKIS 742
Query: 59 LGPQLMEHQLLHLNQ 15 +L E LL +N+ Sbjct: 743 SARELEEQALLFVNE 757
>tr|B8HA23|B8HA23_9MICC Ribonuclease, Rne/Rng family OS=Arthrobacter chlorophenolicus A6 GN=Achl_2147 PE=4 SV=1 Length = 1151
Score = 33.1 bits (74), Expect = 7.2 Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 8/101 (7%) Frame = -3
Query: 297 EVPKEKKETSVLPDKNGKRSHASEAHLKEEKEDTICTVRDXXXXXXXXKLDADNQ----- 133 EVP E+ ET + + A+ A E + + T LDA+ + Sbjct: 123 EVPAEQAETKPVRRRRVATRKAAPAGDPAETQASAETPAAAQEPPAAVALDAETEDRGAV 182
Query: 132 ---ASEPARTVTNGKKKLDADNQTSGPARTTTNGASAAAPE 19 A+ A T +++ DAD T+GPA+ T AAA E Sbjct: 183 ARKAAVQAAVTTAAEQEPDADEATAGPAQATGTAVPAAAGE 223
>tr|Q2TBL3|Q2TBL3_BOVIN Zinc finger, CCHC domain containing 10 OS=Bos taurus GN=ZCCHC10 PE=2 SV=1 Length = 170
Score = 33.1 bits (74), Expect = 7.2 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Frame = -3
Query: 288 KEKKETSVLPDK-NGKRSHASEAHLKEEKEDTICTVRDXXXXXXXXKLDADNQASEPART 112 K+K+ SV N S AS++ + E+ T + D D + +S + + Sbjct: 79 KKKRSKSVTSSSSNSSDSSASDSSSESEETSTSSSSEDSDS-------DESSSSSSSSAS 131
Query: 111 VTNGKKKLDADNQTSGPARTTTNGASAAAPEPKKRK 4 T+ D+D+ +S + ++T+ S++ EP K+K Sbjct: 132 STSSSSSSDSDSDSSSSSSSSTSTDSSSDDEPPKKK 167
>tr|A7E3S6|A7E3S6_BOVIN Zinc finger, CCHC domain containing 10 (Fragment) OS=Bos taurus GN=ZCCHC10 PE=2 SV=1 Length = 168
Score = 33.1 bits (74), Expect = 7.2 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 1/96 (1%) Frame = -3
Query: 288 KEKKETSVLPDK-NGKRSHASEAHLKEEKEDTICTVRDXXXXXXXXKLDADNQASEPART 112 K+K+ SV N S AS++ + E+ T + D D + +S + + Sbjct: 77 KKKRSKSVTSSSSNSSDSSASDSSSESEETSTSSSSEDSDS-------DESSSSSSSSAS 129
Query: 111 VTNGKKKLDADNQTSGPARTTTNGASAAAPEPKKRK 4 T+ D+D+ +S + ++T+ S++ EP K+K Sbjct: 130 STSSSSSSDSDSDSSSSSSSSTSTDSSSDDEPPKKK 165
>tr|A7PY21|A7PY21_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026269001 PE=4 SV=1 Length = 242
Score = 32.7 bits (73), Expect = 9.3 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 5/81 (6%) Frame = -3
Query: 318 FVSLSSPEVPKEKKETSVLPDKNGKRSHASE--AHLKEE---KEDTICTVRDXXXXXXXX 154 F S S+P+ P+ + S+ +K GKR A E H K+E K I D Sbjct: 45 FTSPSTPQRPQGSAKASIDKEKKGKRGDAEEKKLHPKDELNYKTTKIDAAGDGDHFMTSQ 104
Query: 153 KLDADNQASEPARTVTNGKKK 91 ++ DN + P+ T GK+K Sbjct: 105 DME-DNDGTVPSSTHEKGKRK 124
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