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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913677
Clone id YMU001_000033_A08
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCATTGACTGTCTCATACCACAACAAGCAAGACTCTGAGCCCACGGGTGTTGCTAGCCTC
ATAGCAGATCGATGACCTGAACAGCAGCAACCTTTCTCGAACCGCCCTTCGACACATTTG
AGCAATAAAGCCAGTTACCATACCAACCAAGTGCCCGGCAAAAATTCCCGACTAAAAGGC
CATAAGCTAAAGGGGGCAATGGATGACAAGGGCAGATCTTAAAAACTTATCTTTTACTTC
CTTATTACTCGGAACATATGGTTAATGTGAAAAGGGTGCAAGCTGCAGGGCTAGCTCTTA
ATTGGAGAGATATCCTCTACTTGTTCCAAGCTCGAGGATTTTTTCTAGTGACTACCATCC
AAAAGCTAATATCTGAAGCTAATTTCATAATTAGAAACGAGAAAACATTACCTTGCTTGC
AACTCGGCTTTGCTGCCTACGCAACCTCCTTGCTCCTGTTCATGAGCTCGCCGATGCTGC
ACTGAGCGATTCATACCAGCATCTCCTGCACATCTCA
■■Homology search results ■■ -
sp_hit_id A7KAK6
Definition sp|A7KAK6|ATG26_PICAN Sterol 3-beta-glucosyltransferase OS=Pichia angusta
Align length 76
Score (bit) 30.8
E-value 3.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913677|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_A08.
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A7KAK6|ATG26_PICAN Sterol 3-beta-glucosyltransferase OS=Pichi...    31   3.9  
sp|Q9PJI3|DLDH_CHLMU Dihydrolipoyl dehydrogenase OS=Chlamydia mu...    30   6.7  
sp|O84561|DLDH_CHLTR Dihydrolipoyl dehydrogenase OS=Chlamydia tr...    30   8.7  
sp|A2ABV5|MED14_MOUSE Mediator of RNA polymerase II transcriptio...    30   8.8  

>sp|A7KAK6|ATG26_PICAN Sterol 3-beta-glucosyltransferase OS=Pichia
            angusta GN=ATG26 PE=3 SV=1
          Length = 1241

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
 Frame = +3

Query: 192  GGNG*QGQILK---TYLLLPYYSEHMVNVKRVQAAGLALNWRDILYLFQARGFFLVTTIQ 362
            GG+G  G  L+     ++ P++ +      RV+  G  ++ +D+ Y   AR    VTT  
Sbjct: 1114 GGSGTTGASLRFGVPTIIKPFFGDQKFYAGRVEDLGCGVSLKDLNYKSLARALKEVTTNT 1173

Query: 363  KLISEANFI---IRNE 401
            ++I +A  +   IR+E
Sbjct: 1174 RIIEKAKLVGARIRSE 1189


>sp|Q9PJI3|DLDH_CHLMU Dihydrolipoyl dehydrogenase OS=Chlamydia
           muridarum GN=lpdA PE=3 SV=1
          Length = 465

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = +3

Query: 366 LISEANFIIRNEKTLPCLQLGFAAYATSLLLFMSSPML 479
           LISE    IRNE TLPC+     A+ T   ++  S +L
Sbjct: 415 LISEITLAIRNELTLPCIYETIHAHPTLAEVWAESALL 452


>sp|O84561|DLDH_CHLTR Dihydrolipoyl dehydrogenase OS=Chlamydia
           trachomatis GN=lpdA PE=3 SV=1
          Length = 465

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 366 LISEANFIIRNEKTLPCLQLGFAAYATSLLLFMSSPML 479
           LISE    +RNE TLPC+     A+ T   ++  S +L
Sbjct: 415 LISEITLAVRNELTLPCIYETIHAHPTLAEVWAESALL 452


>sp|A2ABV5|MED14_MOUSE Mediator of RNA polymerase II transcription
            subunit 14 OS=Mus musculus GN=Med14 PE=1 SV=1
          Length = 1459

 Score = 29.6 bits (65), Expect = 8.8
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 12/57 (21%)
 Frame = +1

Query: 22   NKQDSEPTGVA-----SLIADR*PEQQQPFSNRPSTH-----LSNKASYHT--NQVP 156
            N+ D+ P+ +      SLI+   P QQQPF  +P T       S   SYH+  NQ P
Sbjct: 985  NEDDNPPSPIGGDMMDSLISQLQPPQQQPFPKQPGTSGAYPLTSPPTSYHSTVNQSP 1041
tr_hit_id B1N3N3
Definition tr|B1N3N3|B1N3N3_ENTHI Putative uncharacterized protein OS=Entamoeba histolytica HM-1:IMSS
Align length 54
Score (bit) 33.9
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913677|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_A08.
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B1N3N3|B1N3N3_ENTHI Putative uncharacterized protein OS=Entam...    34   4.9  

>tr|B1N3N3|B1N3N3_ENTHI Putative uncharacterized protein
           OS=Entamoeba histolytica HM-1:IMSS GN=EHI_097750 PE=3
           SV=1
          Length = 356

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +3

Query: 234 LLPYYSEHMVNVK-RVQAAGLALNWRDILYLFQARGFFLVTTIQKLISEANFII 392
           ++PYY E  VNVK R     +   +R I YL    G    TTI  +I E + +I
Sbjct: 19  VIPYYKEFQVNVKGRWIGKSIGEIYRKITYLINKNGIKKETTINSVIEEHDILI 72