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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913678
Clone id YMU001_000033_A10
Library
Length 511
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACATATATTCCTCATCCACCACGACGGAAAATCTACAAGAGTTTCTAGCCACCAAAAAAA
TGGCAGTGTTATTACATGCCCTCGACCCAGCCATCGAGTGCCTCTGCGGGCAAGAAAACC
AACAGGTGTGGAAAAATTTTATAGAACTCATGTCTGCTGTTCCAGCTACAAGGCACTTGA
TGAGAGATGCCACTTTGCCTCTCCACTAAATTTCCTTAAGTGTTTCTCTATAGGAATCAA
AAATGAGCAAATGCCCAGCACAATACCCGTATACGAAACTACATTGCAAAGATGGGATGC
CTCATCCCAACCATAGGACGTACAATGCGATCATGGCACCTGTTGCACTCAGAAGATGCA
ACACTCCTCGACACTGCCAGCCATCCCATTTGGACACCACCATAATCAATGGCAATATAT
ATATTACCTGAGACAGACCGGCTGTACATGTCCCTTCGCGGTGTCCAAAACAAGCCATGA
ATCATCACCTCTACAAAAGAACATATCTATC
■■Homology search results ■■ -
sp_hit_id A9IRA0
Definition sp|A9IRA0|LGT_BART1 Prolipoprotein diacylglyceryl transferase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
Align length 30
Score (bit) 30.4
E-value 5.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913678|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_A10.
         (511 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A9IRA0|LGT_BART1 Prolipoprotein diacylglyceryl transferase OS...    30   5.0  
sp|Q4AAX7|TRUB_COXBU tRNA pseudouridine synthase B OS=Coxiella b...    30   8.5  
sp|A9N8V4|TRUB_COXBR tRNA pseudouridine synthase B OS=Coxiella b...    30   8.5  
sp|A9KBM3|TRUB_COXBN tRNA pseudouridine synthase B OS=Coxiella b...    30   8.5  
sp|Q99558|M3K14_HUMAN Mitogen-activated protein kinase kinase ki...    30   8.5  

>sp|A9IRA0|LGT_BART1 Prolipoprotein diacylglyceryl transferase
           OS=Bartonella tribocorum (strain CIP 105476 / IBS 506)
           GN=lgt PE=3 SV=1
          Length = 292

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 93  WLGRGHVITLPFFWW-LETLVDFPSWWMRN 7
           W G G+V+ + F WW  + L+  PS W +N
Sbjct: 29  WYGLGYVVGILFAWWYAQKLLKKPSLWHKN 58


>sp|Q4AAX7|TRUB_COXBU tRNA pseudouridine synthase B OS=Coxiella
           burnetii GN=truB PE=3 SV=1
          Length = 309

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 22/60 (36%), Positives = 26/60 (43%)
 Frame = +2

Query: 161 SSYKALDERCHFASPLNFLKCFSIGIKNEQMPSTIPVYETTLQRWDASSQP*DVQCDHGT 340
           S Y AL    H   PL   K    GI+ E+    + +YE TL  WD  S    V C  GT
Sbjct: 128 SMYSALK---HKGQPL--YKLARQGIEVERKTRQVTIYELTLLDWDNESIELYVHCSKGT 182


>sp|A9N8V4|TRUB_COXBR tRNA pseudouridine synthase B OS=Coxiella
           burnetii (strain RSA 331 / Henzerling II) GN=truB PE=3
           SV=1
          Length = 309

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 22/60 (36%), Positives = 26/60 (43%)
 Frame = +2

Query: 161 SSYKALDERCHFASPLNFLKCFSIGIKNEQMPSTIPVYETTLQRWDASSQP*DVQCDHGT 340
           S Y AL    H   PL   K    GI+ E+    + +YE TL  WD  S    V C  GT
Sbjct: 128 SMYSALK---HKGQPL--YKLARQGIEVERKTRQVTIYELTLLDWDNESIELYVHCSKGT 182


>sp|A9KBM3|TRUB_COXBN tRNA pseudouridine synthase B OS=Coxiella
           burnetii (strain Dugway 5J108-111) GN=truB PE=3 SV=1
          Length = 309

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 22/60 (36%), Positives = 26/60 (43%)
 Frame = +2

Query: 161 SSYKALDERCHFASPLNFLKCFSIGIKNEQMPSTIPVYETTLQRWDASSQP*DVQCDHGT 340
           S Y AL    H   PL   K    GI+ E+    + +YE TL  WD  S    V C  GT
Sbjct: 128 SMYSALK---HKGQPL--YKLARQGIEVERKTRQVTIYELTLLDWDNESIELYVHCSKGT 182


>sp|Q99558|M3K14_HUMAN Mitogen-activated protein kinase kinase
           kinase 14 OS=Homo sapiens GN=MAP3K14 PE=1 SV=2
          Length = 947

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = +2

Query: 2   HIFLIHH--DGKSTRVSSHQKNGSVITCPRPSHRVPLRARKPTGVEKFYRTHVCCSSYKA 175
           H++ +HH  DG    + +H    S +  P P H  PL+  KP  +E F     C  S K 
Sbjct: 238 HVWKLHHPQDGGPLPLPTHPFPYSRLPHPFPFH--PLQPWKPHPLESFLGKLACVDSQKP 295

Query: 176 LDE 184
           L +
Sbjct: 296 LPD 298
tr_hit_id Q8YPB2
Definition tr|Q8YPB2|Q8YPB2_ANASP 3-oxoacyl-[acyl-carrier-protein] synthase OS=Anabaena sp. (strain PCC 7120)
Align length 49
Score (bit) 33.1
E-value 8.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913678|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_A10.
         (511 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8YPB2|Q8YPB2_ANASP 3-oxoacyl-[acyl-carrier-protein] synthase...    33   8.1  

>tr|Q8YPB2|Q8YPB2_ANASP 3-oxoacyl-[acyl-carrier-protein] synthase
           OS=Anabaena sp. (strain PCC 7120) GN=all4286 PE=3 SV=1
          Length = 388

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 274 VYGYCAGHLLIFDSYRETLKEI*WRGKVASLIKCLVAGTADMSSIKFFH 128
           +YG   G  LI D+Y  T  E   +G +AS+ +CL      ++ I + H
Sbjct: 231 IYGQILGFGLINDAYHSTQLEPEGKGAIASIQQCLARSQLTLTDIDYIH 279