BP913680 |
Clone id |
YMU001_000033_A12 |
Library |
YMU01 |
Length |
425 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000033_A12. |
Accession |
BP913680 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACGGTTGCTCTTGGGAATCGAGCTCTTGAATGTCAACTTTTGTGTGTGTGCTACTCTCAC ATTTACGAAACAGGTTCCTCCTCAACACTCGCACAAAAATGTTCATCCTCCAAGTAAACA AGGAGATACAGAATCCTTACAGGTTCGCGTGTCGACACGTAGAGATTTAAACAAACATAT TTTGCGAGTGGCTCATCATGTACCAGCTGAAACAACCAGGGTCCACTTTATCAAAAAACT GGCATGCTCCCTGTTAGTCACATCCAGGACCTCACAGCAGAGCGCATCATCGTTTTCTGC TTCCACGCCCTTTACCAAGCTGCCCAGACTTGAAAGAAGCTTCTTGCCCTTGCAAGAAAG CCATTGCTTTGCGGTACTTCTCCTCACGCTGCTCCTCTACTAGAGCCTTCTCTTTGGCCT TCTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q86X51 |
Definition |
sp|Q86X51|YX003_HUMAN Uncharacterized protein LOC340602 OS=Homo sapiens |
Align length |
54 |
Score (bit) |
33.5 |
E-value |
0.36 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S6T6 |
Definition |
tr|A9S6T6|A9S6T6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
45 |
Score (bit) |
66.6 |
E-value |
6.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913680|Adiantum capillus-veneris mRNA, clone: YMU001_000033_A12. (425 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S6T6|A9S6T6_PHYPA Predicted protein OS=Physcomitrella paten... 67 6e-10 tr|B8LMA3|B8LMA3_PICSI Putative uncharacterized protein OS=Picea... 63 8e-09 tr|B4YPW0|B4YPW0_BRAOA Putative uncharacterized protein OS=Brass... 62 1e-08 tr|Q9LQB3|Q9LQB3_ARATH F4N2.4 OS=Arabidopsis thaliana PE=4 SV=1 60 4e-08 tr|A7P2C0|A7P2C0_VITVI Chromosome chr1 scaffold_5, whole genome ... 58 3e-07 tr|A5AVR9|A5AVR9_VITVI Putative uncharacterized protein OS=Vitis... 58 3e-07 tr|Q8H8R4|Q8H8R4_ORYSJ Putative uncharacterized protein OJ1523_A... 57 6e-07 tr|Q10H82|Q10H82_ORYSJ Nop14-like family protein, expressed OS=O... 57 6e-07 tr|Q0DQG5|Q0DQG5_ORYSJ Os03g0598200 protein OS=Oryza sativa subs... 57 6e-07 tr|B8AM42|B8AM42_ORYSI Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|A3AK58|A3AK58_ORYSJ Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|Q010R6|Q010R6_OSTTA Nucleolar protein involved in 40S ribosom... 35 1.8 tr|B1Q2K1|B1Q2K1_HUMAN cDNA FLJ61664, highly similar to Homo sap... 33 7.0 tr|B1Q2B0|B1Q2B0_HUMAN URCC5 OS=Homo sapiens GN=URCC5 PE=2 SV=1 33 7.0 tr|Q587G6|Q587G6_9TRYP Putative uncharacterized protein OS=Trypa... 33 9.1 tr|B4IWE5|B4IWE5_DROYA GE15183 OS=Drosophila yakuba GN=GE15183 P... 33 9.1 tr|B4IW60|B4IW60_DROYA GE14660 OS=Drosophila yakuba GN=GE14660 P... 33 9.1
>tr|A9S6T6|A9S6T6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_181805 PE=4 SV=1 Length = 942
Score = 66.6 bits (161), Expect = 6e-10 Identities = 30/45 (66%), Positives = 39/45 (86%) Frame = -2
Query: 424 EKAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRKR 290 EKAKE A+++++REEKY KAM+FLQ QE++FKSGQLGKG RK+ Sbjct: 897 EKAKENAVLQQEREEKYNKAMSFLQQQESAFKSGQLGKGSSKRKK 941
>tr|B8LMA3|B8LMA3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 198
Score = 62.8 bits (151), Expect = 8e-09 Identities = 29/43 (67%), Positives = 37/43 (86%) Frame = -2
Query: 421 KAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRK 293 KA+E+A+ EE+R +KYRKAMAFLQ QE++FKSGQLG+G RK Sbjct: 156 KARERAVAEEERADKYRKAMAFLQEQESNFKSGQLGRGGKKRK 198
>tr|B4YPW0|B4YPW0_BRAOA Putative uncharacterized protein OS=Brassica oleracea var. alboglabra GN=BoB029L16.30 PE=4 SV=1 Length = 879
Score = 62.0 bits (149), Expect = 1e-08 Identities = 29/44 (65%), Positives = 38/44 (86%) Frame = -2
Query: 421 KAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRKR 290 KAKEKA+ E++R EK+ K +AFLQ QE +FKSGQLGKG+G++KR Sbjct: 834 KAKEKAVQEQERAEKHGKNLAFLQEQEHAFKSGQLGKGKGNKKR 877
>tr|Q9LQB3|Q9LQB3_ARATH F4N2.4 OS=Arabidopsis thaliana PE=4 SV=1 Length = 891
Score = 60.5 bits (145), Expect = 4e-08 Identities = 29/44 (65%), Positives = 36/44 (81%) Frame = -2
Query: 421 KAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRKR 290 KAKEKA E++R EK+ KA AFLQ QE +FKSGQLGKG+G ++R Sbjct: 847 KAKEKAAHEQERAEKHGKAWAFLQEQEHAFKSGQLGKGKGKKRR 890
>tr|A7P2C0|A7P2C0_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029998001 PE=4 SV=1 Length = 892
Score = 57.8 bits (138), Expect = 3e-07 Identities = 28/43 (65%), Positives = 34/43 (79%) Frame = -2
Query: 421 KAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRK 293 K ++KA+ EE+R EKY KA AFLQ QE +FKSGQLGKGR R+ Sbjct: 850 KKRDKAMQEEERAEKYGKARAFLQEQEHAFKSGQLGKGRKRRR 892
>tr|A5AVR9|A5AVR9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013458 PE=4 SV=1 Length = 815
Score = 57.8 bits (138), Expect = 3e-07 Identities = 28/43 (65%), Positives = 34/43 (79%) Frame = -2
Query: 421 KAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRK 293 K ++KA+ EE+R EKY KA AFLQ QE +FKSGQLGKGR R+ Sbjct: 773 KKRDKAMQEEERAEKYGKARAFLQEQEHAFKSGQLGKGRKRRR 815
>tr|Q8H8R4|Q8H8R4_ORYSJ Putative uncharacterized protein OJ1523_A02.5 (Putative uncharacterized protein OSJNBa0087M10.7) OS=Oryza sativa subsp. japonica GN=OJ1523_A02.5 PE=4 SV=2 Length = 952
Score = 56.6 bits (135), Expect = 6e-07 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = -2
Query: 421 KAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRK 293 K KE+ E++R EKY KAMAFLQ QE +FKSGQLGKGR R+ Sbjct: 910 KEKERIKQEQERAEKYGKAMAFLQEQEHAFKSGQLGKGRKRRR 952
>tr|Q10H82|Q10H82_ORYSJ Nop14-like family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g40110 PE=4 SV=1 Length = 929
Score = 56.6 bits (135), Expect = 6e-07 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = -2
Query: 421 KAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRK 293 K KE+ E++R EKY KAMAFLQ QE +FKSGQLGKGR R+ Sbjct: 887 KEKERIKQEQERAEKYGKAMAFLQEQEHAFKSGQLGKGRKRRR 929
>tr|Q0DQG5|Q0DQG5_ORYSJ Os03g0598200 protein OS=Oryza sativa subsp. japonica GN=Os03g0598200 PE=4 SV=1 Length = 912
Score = 56.6 bits (135), Expect = 6e-07 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = -2
Query: 421 KAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRK 293 K KE+ E++R EKY KAMAFLQ QE +FKSGQLGKGR R+ Sbjct: 870 KEKERIKQEQERAEKYGKAMAFLQEQEHAFKSGQLGKGRKRRR 912
>tr|B8AM42|B8AM42_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12505 PE=4 SV=1 Length = 947
Score = 56.6 bits (135), Expect = 6e-07 Identities = 28/43 (65%), Positives = 33/43 (76%) Frame = -2
Query: 421 KAKEKALVEEQREEKYRKAMAFLQGQEASFKSGQLGKGRGSRK 293 K KE+ E++R EKY KAMAFLQ QE +FKSGQLGKGR R+ Sbjct: 905 KEKERIKQEQERAEKYGKAMAFLQEQEHAFKSGQLGKGRKRRR 947
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