BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913687|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_B07.
         (258 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O52196|ALGI_AZOVI Probable poly(beta-D-mannuronate) O-acetyla...    31   2.2  
sp|A0LDC6|TRMFO_MAGSM Methylenetetrahydrofolate--tRNA-(uracil-5-...    30   2.8  
sp|Q51392|ALGI_PSEAE Probable poly(beta-D-mannuronate) O-acetyla...    30   2.8  

>sp|O52196|ALGI_AZOVI Probable poly(beta-D-mannuronate) O-acetylase
           OS=Azotobacter vinelandii GN=algI PE=3 SV=1
          Length = 499

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 162 VDYHIFSHPFPHDFLSVPHFKFGDLNDRFNHLAH 61
           VD+  F   FPH  ++ P  +F DL D+FNH  H
Sbjct: 152 VDFAAFVAIFPH-LIAGPVLRFRDLVDQFNHRTH 184


>sp|A0LDC6|TRMFO_MAGSM
           Methylenetetrahydrofolate--tRNA-(uracil-5-)-
           methyltransferase trmFO OS=Magnetococcus sp. (strain
           MC-1) GN=trmFO PE=3 SV=1
          Length = 439

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 115 GQEIMWKRVTKNVIVYRYETCLCIRKHQMTPRHNPSA*GDLI 240
           G E  W+   +N+ V  YE    +R H MTP H     G+L+
Sbjct: 13  GSEAAWQLAQRNIPVRLYE----MRPHTMTPAHQTDHCGELV 50


>sp|Q51392|ALGI_PSEAE Probable poly(beta-D-mannuronate) O-acetylase
           OS=Pseudomonas aeruginosa GN=algI PE=3 SV=2
          Length = 520

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = -1

Query: 162 VDYHIFSHPFPHDFLSVPHFKFGDLNDRFNHLAH 61
           +D+  F   FPH  ++ P  +F DL D+FNH  H
Sbjct: 152 IDFAAFVAIFPH-LIAGPVLRFKDLVDQFNHRTH 184

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913687|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_B07.
         (258 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2JTI8|Q2JTI8_SYNJA TPR repeat protein OS=Synechococcus sp. (...    35   1.9  
tr|B1EH58|B1EH58_9ESCH SepQ OS=Escherichia albertii TW07627 GN=E...    33   5.4  

>tr|Q2JTI8|Q2JTI8_SYNJA TPR repeat protein OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=CYA_1854 PE=4 SV=1
          Length = 749

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -1

Query: 198 LMLPYAQARLIPVDYHIFSHPFPHDFLSVPHFKFGDLNDRFNHLAHHTET 49
           LML  A  RL PV    ++HP      ++ +F   DL +  N  AH++ET
Sbjct: 467 LMLQLASLRLAPVQCSTWAHPVTSGLSTIDYFLSSDLMEPENGQAHYSET 516


>tr|B1EH58|B1EH58_9ESCH SepQ OS=Escherichia albertii TW07627
           GN=ESCAB7627_4321 PE=4 SV=1
          Length = 305

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
 Frame = -1

Query: 213 VTWCHLMLPYAQARLIPVD------YHIFSHPFPHDFLSVPHFKFGDL-NDRFNHLAHHT 55
           + WCH + PY+ +RLIP D        +     P D +SV   +F  L  D +  + ++ 
Sbjct: 70  IQWCHELFPYSDSRLIPEDTIKLMVLWVMQAVLPEDDVSVDDVQFTALKKDIYPVIENNN 129

Query: 54  ET*KVHILFL 25
            T +++++ L
Sbjct: 130 GTNRLNVIIL 139