BP913689
Clone id YMU001_000033_B09
Library
Length 583
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_B09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGACAATATATCAATACTGAGATTACACTTTCATGTTTCAAGCTTTGCACATACAACTT
GTAATTCTGACAAACGACCGAGGCACCCTTTGCTCAAGATAAGCATGGGTAAACTGACCT
TGAAACAAACATAGGTAAGCTGATCTTTGATACAGCCATGAAATATCATCCACTGGCTGT
GTCCCACCCGATCCATCATCATCTAGCCATTGAAATCTTCATAAAAAAGCGAGAGAATAA
ACTAATAATCATTACATACATAGGTAGCTTCACTTAAATGGTTTCCAAAATCTTTCTTTG
GTACTTCTGCTTCATAGATCCTTTGCATCTATCTAGTTGCCTCTCTTTTCAAAACTTGAG
AGAGGAGAAGCTTCACGGTCTACCAAGCGATACTGATAGTTGTCGGAGATTTACATTGAT
CTTCGACAAAAAGGTAGATAGTTACCAGTTACTCCCTTCATCATAATCGCCATGTATTAG
AACACAAAACCATCCAAAAAATCACCAACTCCTTGCCAATGACTTCCCATGAGAAGGCAC
GCATCTGCCATTCACAATGGACCCTGCTGTTGCATAGTTGCAA
■■Homology search results ■■ -
sp_hit_id Q19V69
Definition sp|Q19V69|CEMA_CHLAT Chloroplast envelope membrane protein OS=Chlorokybus atmophyticus
Align length 58
Score (bit) 31.6
E-value 3.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913689|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_B09.
(583 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q19V69|CEMA_CHLAT Chloroplast envelope membrane protein OS=Ch... 32 3.0

>sp|Q19V69|CEMA_CHLAT Chloroplast envelope membrane protein
OS=Chlorokybus atmophyticus GN=cemA PE=3 SV=2
Length = 236

Score = 31.6 bits (70), Expect = 3.0
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2

Query: 203 LAIEIFIKKR---ENKLIIITYIGSFT*MVSKIF-LWYFCFIDPLHLSSCLSFQNLRE 364
+ IE+F+K ENK I ++ +F ++ +F W F +++ + S+ +F N+ E
Sbjct: 179 ILIEVFLKHLGLPENKDFIFLFVATFPVVLDTVFKYWIFLYLNKISPSAVATFHNMNE 236


tr_hit_id Q6BG56
Definition tr|Q6BG56|Q6BG56_PARTE Putative uncharacterized protein OS=Paramecium tetraurelia
Align length 50
Score (bit) 34.7
E-value 4.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913689|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_B09.
(583 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6BG56|Q6BG56_PARTE Putative uncharacterized protein OS=Param... 35 4.0
tr|A0BBK9|A0BBK9_PARTE Chromosome undetermined scaffold_1, whole... 35 4.0
tr|Q9M137|Q9M137_ARATH Putative CHP-rich zinc finger protein OS=... 34 5.2
tr|O04599|O04599_ARATH A_IG002N01.27 protein OS=Arabidopsis thal... 34 5.2

>tr|Q6BG56|Q6BG56_PARTE Putative uncharacterized protein
OS=Paramecium tetraurelia GN=PTMB.167 PE=4 SV=1
Length = 964

Score = 34.7 bits (78), Expect = 4.0
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +2

Query: 116 DLETNIGKLIFDTAMKYHPLAVSHPIHHHLAIEIFIKKRENKLIIITYIG 265
+L+ N +L F T YHP PIH+HL EI ENK Y G
Sbjct: 203 NLDQNFERLTFHTPDLYHP-----PIHYHLGNEIINGSLENKYFTKNYPG 247


>tr|A0BBK9|A0BBK9_PARTE Chromosome undetermined scaffold_1, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00000361001 PE=4 SV=1
Length = 988

Score = 34.7 bits (78), Expect = 4.0
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +2

Query: 116 DLETNIGKLIFDTAMKYHPLAVSHPIHHHLAIEIFIKKRENKLIIITYIG 265
+L+ N +L F T YHP PIH+HL EI ENK Y G
Sbjct: 203 NLDQNFERLTFHTPDLYHP-----PIHYHLGNEIINGSLENKYFTKNYPG 247


>tr|Q9M137|Q9M137_ARATH Putative CHP-rich zinc finger protein
OS=Arabidopsis thaliana GN=At4g01350 PE=2 SV=1
Length = 652

Score = 34.3 bits (77), Expect = 5.2
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2

Query: 137 KLIFDTAMKYHPLAVSHPIHHHLAIEIFIKKRENKL 244
K+ AMK P A+ HP+ HH ++ +F+KKRE K+
Sbjct: 102 KVDLTCAMKPSPPAIEHPLCHHHSL-VFLKKREEKV 136


>tr|O04599|O04599_ARATH A_IG002N01.27 protein OS=Arabidopsis
thaliana GN=A_IG002N01.27 PE=4 SV=1
Length = 589

Score = 34.3 bits (77), Expect = 5.2
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2

Query: 137 KLIFDTAMKYHPLAVSHPIHHHLAIEIFIKKRENKL 244
K+ AMK P A+ HP+ HH ++ +F+KKRE K+
Sbjct: 102 KVDLTCAMKPSPPAIEHPLCHHHSL-VFLKKREEKV 136