BP913690 |
Clone id |
YMU001_000033_B10 |
Library |
YMU01 |
Length |
446 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000033_B10. |
Accession |
BP913690 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTTGGAACTTGCATGCCGCAGCCTCGAAACAGTGGTTGTGCCGCCTCGCTGGTGACCGTC TCTTCCAAAGCTTCAGAGCAAAAGTCCATCCCTAGCTCATGAAGATCAACATGAGCATCC GCATCCACTCCTATGTGAGTGCGGAAAAGGTGGGCAAAATCTAGAAGCCACTCATCTATC TCAATCTCCTTGCCACCTTCTTCGTTTTCACACTTCCCACGCTTCCTGTCTGAAGCATTG AGCAATTCATCATCTGCAAGGATAGCACTTTCGGTGAGAGCGGCATCTTCTCGTGCAATT TCTTCCGAGCCATCAGGATTCTCATCAGCATCTTCTATAGCATGTGAGTTCAAGTCTTCT TCTTGCTCTTCGAGGACAGGTTCCTGCTCAATGCTCACCTCCACTATATGCAGCCTTAGA AGAGGTAGCGCTGAAGCAGAAGCATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q10462 |
Definition |
sp|Q10462|CAH5_CAEEL Putative carbonic anhydrase 5 OS=Caenorhabditis elegans |
Align length |
78 |
Score (bit) |
33.5 |
E-value |
0.42 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913690|Adiantum capillus-veneris mRNA, clone: YMU001_000033_B10. (446 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q10462|CAH5_CAEEL Putative carbonic anhydrase 5 OS=Caenorhabd... 33 0.42 sp|P40381|SWI6_SCHPO Chromatin-associated protein swi6 OS=Schizo... 31 2.1 sp|Q8TKW2|COOS1_METAC Carbon monoxide dehydrogenase 1 OS=Methano... 30 4.6 sp|Q54518|CPSB2_STRPN Tyrosine-protein phosphatase cpsB OS=Strep... 30 6.0 sp|Q9AHD4|CPSB1_STRPN Tyrosine-protein phosphatase cpsB OS=Strep... 30 6.0 sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapien... 30 6.0 sp|Q03388|VPS72_YEAST Vacuolar protein sorting-associated protei... 29 7.8 sp|Q6ZQ06|QN1_MOUSE Protein QN1 homolog OS=Mus musculus GN=Kiaa1... 29 7.8 sp|Q867X0|PME3_CAEEL Poly(ADP-ribose) glycohydrolase pme-3 OS=Ca... 29 7.8 sp|Q339W7|LHP1_ORYSJ Probable chromo domain-containing protein L... 29 7.8 sp|Q5CZC0|FSIP2_HUMAN Fibrous sheath-interacting protein 2 OS=Ho... 29 7.8
>sp|Q10462|CAH5_CAEEL Putative carbonic anhydrase 5 OS=Caenorhabditis elegans GN=cah-5 PE=2 SV=3 Length = 310
Score = 33.5 bits (75), Expect = 0.42 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%) Frame = -1
Query: 239 NASDRKRGKCENEEGGKEIEIDEWLLDFAHLFRTH-IGVDADAHVDLHELGMDFCSEALE 63 N D +GKC+N I+I +D+A L R H + D D ++L G + E Sbjct: 34 NGPDTWQGKCQNHLKQSPIDIRAPDVDYALLHRMHFLNYDMDGKIELSNTGRTLFAGGFE 93
Query: 62 ETVTSEAAQPLFRGCGMQ 9 + + QP+ +G G++ Sbjct: 94 ---SWQHKQPMIQGGGLK 108
>sp|P40381|SWI6_SCHPO Chromatin-associated protein swi6 OS=Schizosaccharomyces pombe GN=swi6 PE=1 SV=1 Length = 328
Score = 31.2 bits (69), Expect = 2.1 Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 6/70 (8%) Frame = -1
Query: 350 NSHAIEDADENPD----GSEEIA--REDAALTESAILADDELLNASDRKRGKCENEEGGK 189 + ++ D D P+ E IA + D+ +++ + +D E ++S + + + EEGG+ Sbjct: 15 SKRSVIDDDSEPELPSMTKEAIASHKADSGSSDNEVESDHESKSSSKKLKENAKEEEGGE 74
Query: 188 EIEIDEWLLD 159 E E DE++++ Sbjct: 75 EEEEDEYVVE 84
>sp|Q8TKW2|COOS1_METAC Carbon monoxide dehydrogenase 1 OS=Methanosarcina acetivorans GN=cooS1 PE=3 SV=1 Length = 628
Score = 30.0 bits (66), Expect = 4.6 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 9/88 (10%) Frame = -1
Query: 329 ADENPDGSEEIAREDAALTESAILADDE--------LLNASDRKRGKCENEEGGKEIEID 174 A E +EE +RE+ A+ ++ L + + R K +E G + ID Sbjct: 132 ASEYGISAEEKSREEVAVELASALLSEFGKQEGPILCTKRAPESRLKLWSELGIEPRGID 191
Query: 173 EWLLDFAHLFRTHIGVDADA-HVDLHEL 93 +++ H RTHIGVD DA H+ LH L Sbjct: 192 REIVECMH--RTHIGVDNDATHILLHGL 217
>sp|Q54518|CPSB2_STRPN Tyrosine-protein phosphatase cpsB OS=Streptococcus pneumoniae GN=cpsB PE=1 SV=1 Length = 243
Score = 29.6 bits (65), Expect = 6.0 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -1
Query: 356 DLNSHAIEDADENPDGSEEIAREDAALTESAILADDELLNASDRKRGKCENEE 198 D++SH + D D+ P EE A L ES +++ S R++G E E Sbjct: 3 DIHSHIVFDVDDGPKSREE---SKALLAESYRQGVRTIVSTSHRRKGMFETPE 52
>sp|Q9AHD4|CPSB1_STRPN Tyrosine-protein phosphatase cpsB OS=Streptococcus pneumoniae GN=cpsB PE=3 SV=1 Length = 243
Score = 29.6 bits (65), Expect = 6.0 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = -1
Query: 356 DLNSHAIEDADENPDGSEEIAREDAALTESAILADDELLNASDRKRGKCENEE 198 D++SH + D D+ P EE A L ES +++ S R++G E E Sbjct: 3 DIHSHIVFDVDDGPKSREE---SKALLAESYRQGVRTIVSTSHRRKGMFETPE 52
>sp|O00203|AP3B1_HUMAN AP-3 complex subunit beta-1 OS=Homo sapiens GN=AP3B1 PE=1 SV=2 Length = 1094
Score = 29.6 bits (65), Expect = 6.0 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = -1
Query: 335 EDADENPDGSEEIARE-DAALTESAILADDELLNASDRKRGKCENEEGGKEIE 180 E+ D N D SE+ + E D+ + L + + + +GK ++E+G KE E Sbjct: 708 EEGDSNEDSSEDSSSEQDSESGRESGLENKRTAKRNSKAKGKSDSEDGEKENE 760
>sp|Q03388|VPS72_YEAST Vacuolar protein sorting-associated protein 72 OS=Saccharomyces cerevisiae GN=VPS72 PE=1 SV=2 Length = 795
Score = 29.3 bits (64), Expect = 7.8 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = -1
Query: 356 DLNSHAIEDADENPDGSEEIA--REDAALTESAILADDELLNASDRKRGKCENEEGGKEI 183 D A +D DE + +E R++ + S ADD + ++S+ + EN+E +E Sbjct: 75 DFEMMAKDDDDEGEEKEDETQSIRKEPSQASSEQAADDLMFSSSESEDSSNENDEDAEEK 134
Query: 182 EI 177 EI Sbjct: 135 EI 136
>sp|Q6ZQ06|QN1_MOUSE Protein QN1 homolog OS=Mus musculus GN=Kiaa1009 PE=2 SV=2 Length = 1403
Score = 29.3 bits (64), Expect = 7.8 Identities = 19/55 (34%), Positives = 25/55 (45%) Frame = -1
Query: 350 NSHAIEDADENPDGSEEIAREDAALTESAILADDELLNASDRKRGKCENEEGGKE 186 N+ ED EN EE+ + E A ADD L+ + K EN E GK+ Sbjct: 175 NTEPAEDGCENESEQEELPETYSDDFEDAEDADDPLITKDEETHPK-ENSESGKD 228
>sp|Q867X0|PME3_CAEEL Poly(ADP-ribose) glycohydrolase pme-3 OS=Caenorhabditis elegans GN=pme-3 PE=2 SV=1 Length = 781
Score = 29.3 bits (64), Expect = 7.8 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%) Frame = -1
Query: 335 EDADENPDGSEEIAREDAALTESAILADDELL-NASDRKRGKCENEEGGKEIEID 174 ED+ ENP+ ++E++ LTE+ +++ E L N ++R +N + + +E D Sbjct: 72 EDSAENPEIAKEVSENCENLTETLKISNIESLDNVTERSEHTLDNHKSTEPMEED 126
>sp|Q339W7|LHP1_ORYSJ Probable chromo domain-containing protein LHP1 OS=Oryza sativa subsp. japonica GN=LHP1 PE=3 SV=1 Length = 415
Score = 29.3 bits (64), Expect = 7.8 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = -1
Query: 320 NPDGSEEIAREDAALTESAILADD--ELLNASDRKRGKCENEEGGKEIEIDEW 168 +PDG EE A A E+ + D+ E+ + ++G+ E EE + E +EW Sbjct: 7 HPDGEEEEAPAAAGEEEAPVEMDEEGEMEEEEEEEQGEGEGEERDEGEEEEEW 59
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B2CXF1 |
Definition |
tr|B2CXF1|B2CXF1_CARAS At1g62390-like protein (Fragment) OS=Cardaminopsis arenosa |
Align length |
137 |
Score (bit) |
118.0 |
E-value |
2.0e-25 |
Report |
|