BP913704 |
Clone id |
YMU001_000033_D01 |
Library |
YMU01 |
Length |
433 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000033_D01. |
Accession |
BP913704 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1419Contig1 |
Sequence |
CATGAATCCAGAACCATTTGTTCCTGCTGCACCATAGCCTATGGCCCGAGTCAATTATCC AAACCCAGAGCCCCCAAGCCTCAAATGGGGCCTCCGGACACAAACTGTATACTCTTCCTG TTTTCCACATAACACACATCACACGTCGCATGCCCCTGTTGAGTCCTTGCTGAAAACAGA CATACTGAAAAGCCAGAGCTACAACAAGAAAAGCATGAGATTCATGTGAAAAGCTGCAAC TACTCCATCACCACAGTCGCACCCACAGCTTTAAGCTTCTCCATAAGTTGGGCAGCCTCC TCTTTCGTCAATCCAGACTTAACAACGCCAGGAGCTTTTTCAACAAACTCCTTGGCTTCC TTAAGACCTAGATTAGTGACTGCCCGCACCTCCTTGATGACCTTGATCTTGGAGGCAGCC TCGAATTTCTCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P41189 |
Definition |
sp|P41189|RL7_LIBAF 50S ribosomal protein L7/L12 OS=Liberibacter africanus |
Align length |
62 |
Score (bit) |
78.6 |
E-value |
1.0e-14 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5X2V5 |
Definition |
tr|A5X2V5|A5X2V5_PTEVI Ribosomal protein (Fragment) OS=Pteris vittata |
Align length |
63 |
Score (bit) |
103.0 |
E-value |
4.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913704|Adiantum capillus-veneris mRNA, clone: YMU001_000033_D01. (433 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5X2V5|A5X2V5_PTEVI Ribosomal protein (Fragment) OS=Pteris vi... 103 4e-21 tr|Q9SZF8|Q9SZF8_ARATH Ribosomal-like protein (AT4g37660/F19F18_... 96 9e-19 tr|A9TYT7|A9TYT7_PHYPA Predicted protein OS=Physcomitrella paten... 94 3e-18 tr|A9TKW0|A9TKW0_PHYPA Predicted protein (Fragment) OS=Physcomit... 93 6e-18 tr|A9S410|A9S410_PHYPA Predicted protein (Fragment) OS=Physcomit... 92 1e-17 tr|Q3HVP5|Q3HVP5_SOLTU Putative uncharacterized protein OS=Solan... 91 2e-17 tr|Q8LI41|Q8LI41_ORYSJ Os07g0626100 protein OS=Oryza sativa subs... 90 5e-17 tr|A7P2P4|A7P2P4_VITVI Chromosome chr1 scaffold_5, whole genome ... 90 5e-17 tr|A2YNW2|A2YNW2_ORYSI Putative uncharacterized protein OS=Oryza... 90 5e-17 tr|Q6I629|Q6I629_ORYSJ Os05g0554100 protein OS=Oryza sativa subs... 89 1e-16 tr|A7PCZ5|A7PCZ5_VITVI Chromosome chr17 scaffold_12, whole genom... 89 1e-16 tr|A2Y795|A2Y795_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|B6TIJ5|B6TIJ5_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 87 3e-16 tr|B6T4E0|B6T4E0_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 87 3e-16 tr|B4FHV0|B4FHV0_MAIZE Putative uncharacterized protein OS=Zea m... 87 3e-16 tr|A7QZB4|A7QZB4_VITVI Chromosome chr7 scaffold_270, whole genom... 87 3e-16 tr|A5C502|A5C502_VITVI Putative uncharacterized protein OS=Vitis... 87 3e-16 tr|B4G1F2|B4G1F2_MAIZE 39S ribosomal protein L12 OS=Zea mays PE=... 87 4e-16 tr|Q6AVT7|Q6AVT7_ORYSJ Os03g0734400 protein OS=Oryza sativa subs... 86 7e-16 tr|A3AMF2|A3AMF2_ORYSJ Putative uncharacterized protein OS=Oryza... 86 7e-16 tr|A2XLR1|A2XLR1_ORYSI Putative uncharacterized protein OS=Oryza... 86 7e-16 tr|B6SHR0|B6SHR0_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 85 2e-15 tr|Q9M7T1|Q9M7T1_ARATH Putative uncharacterized protein F24F17.2... 84 3e-15 tr|B6TP18|B6TP18_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 84 3e-15 tr|B6SHT7|B6SHT7_MAIZE 50S ribosomal protein L12-2 OS=Zea mays P... 84 3e-15 tr|Q6H730|Q6H730_ORYSJ Os02g0198900 protein OS=Oryza sativa subs... 84 4e-15 tr|O23238|O23238_ARATH Ribosomal protein (At4g36420/C7A10_940) O... 84 4e-15 tr|O04527|O04527_ARATH F20P5.9 protein (Putative uncharacterized... 84 4e-15 tr|A2X232|A2X232_ORYSI Putative uncharacterized protein OS=Oryza... 84 4e-15 tr|B4FBL2|B4FBL2_MAIZE Putative uncharacterized protein OS=Zea m... 84 5e-15
>tr|A5X2V5|A5X2V5_PTEVI Ribosomal protein (Fragment) OS=Pteris vittata PE=2 SV=1 Length = 216
Score = 103 bits (257), Expect = 4e-21 Identities = 53/63 (84%), Positives = 59/63 (93%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 EKFEAASKIKVIKEVRA ++LGLKEAKEFVEK P V+KSGLTKEEA+QL++KLKAVGAT Sbjct: 154 EKFEAASKIKVIKEVRAASDLGLKEAKEFVEKVPAVLKSGLTKEEASQLIDKLKAVGATA 213
Query: 251 VME 243 VME Sbjct: 214 VME 216
>tr|Q9SZF8|Q9SZF8_ARATH Ribosomal-like protein (AT4g37660/F19F18_150) OS=Arabidopsis thaliana GN=F19F18.150 PE=2 SV=1 Length = 167
Score = 95.9 bits (237), Expect = 9e-19 Identities = 49/63 (77%), Positives = 56/63 (88%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 EKFEAASKIKVIKE+RA T+LGLKEAK VEKAP +VK+GLTKEEA ++MEKLKAVGA V Sbjct: 105 EKFEAASKIKVIKEIRAFTDLGLKEAKALVEKAPVIVKNGLTKEEAEKIMEKLKAVGAIV 164
Query: 251 VME 243 +E Sbjct: 165 ALE 167
>tr|A9TYT7|A9TYT7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226758 PE=4 SV=1 Length = 195
Score = 94.0 bits (232), Expect = 3e-18 Identities = 48/63 (76%), Positives = 57/63 (90%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 EKF+AASKIK+IKEVR T LGLKEAKE VEKAP V+K+G++KEEA Q++EKLK+VGATV Sbjct: 133 EKFDAASKIKIIKEVRTFTALGLKEAKELVEKAPIVLKAGVSKEEADQIIEKLKSVGATV 192
Query: 251 VME 243 VME Sbjct: 193 VME 195
>tr|A9TKW0|A9TKW0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48350 PE=4 SV=1 Length = 150
Score = 93.2 bits (230), Expect = 6e-18 Identities = 47/63 (74%), Positives = 55/63 (87%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 EKF+A SKIK+IKEVR TNLGLKEAKE VEKAP V+KSG+ KEEA Q++EKLK+VGAT Sbjct: 88 EKFDAGSKIKIIKEVRTFTNLGLKEAKELVEKAPIVLKSGVGKEEAEQIVEKLKSVGATA 147
Query: 251 VME 243 +ME Sbjct: 148 LME 150
>tr|A9S410|A9S410_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_18929 PE=4 SV=1 Length = 139
Score = 92.4 bits (228), Expect = 1e-17 Identities = 47/63 (74%), Positives = 55/63 (87%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 +KF+AASKIK+IKEVR T LGLKEAKE VEKAP V+KSG++KEEA Q++EKLK VGATV Sbjct: 77 DKFDAASKIKIIKEVRTFTALGLKEAKELVEKAPIVLKSGVSKEEAEQIIEKLKTVGATV 136
Query: 251 VME 243 ME Sbjct: 137 TME 139
>tr|Q3HVP5|Q3HVP5_SOLTU Putative uncharacterized protein OS=Solanum tuberosum PE=2 SV=1 Length = 194
Score = 91.3 bits (225), Expect = 2e-17 Identities = 44/63 (69%), Positives = 55/63 (87%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 EKF+AA+KIKVIKEVR+ T+LGLKEAKE VEKAP ++K G+TKEEA +++EK+KAVG Sbjct: 132 EKFDAAAKIKVIKEVRSFTSLGLKEAKELVEKAPAILKQGVTKEEANEIIEKIKAVGGVA 191
Query: 251 VME 243 VME Sbjct: 192 VME 194
>tr|Q8LI41|Q8LI41_ORYSJ Os07g0626100 protein OS=Oryza sativa subsp. japonica GN=OJ1339_F05.119 PE=2 SV=1 Length = 167
Score = 90.1 bits (222), Expect = 5e-17 Identities = 47/63 (74%), Positives = 53/63 (84%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 EK+EAA+KIK+IKEVRAVT+LGLKEAKE VEKAP VV+SGL KEEA L KLKA GA V Sbjct: 105 EKYEAAAKIKIIKEVRAVTDLGLKEAKELVEKAPVVVRSGLPKEEAEALAAKLKAAGAAV 164
Query: 251 VME 243 +E Sbjct: 165 ALE 167
>tr|A7P2P4|A7P2P4_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence (Chromosome undetermined scaffold_1178, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00008009001 PE=4 SV=1 Length = 206
Score = 90.1 bits (222), Expect = 5e-17 Identities = 44/63 (69%), Positives = 56/63 (88%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 E +EAASKIK+IKEVR+ T+LGLKEAK+ VEKAP V+K+G++KEE QL+EKLKA+GA V Sbjct: 144 ESYEAASKIKIIKEVRSFTDLGLKEAKDLVEKAPSVLKAGVSKEEGEQLVEKLKALGAKV 203
Query: 251 VME 243 V+E Sbjct: 204 VLE 206
>tr|A2YNW2|A2YNW2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_26940 PE=4 SV=1 Length = 167
Score = 90.1 bits (222), Expect = 5e-17 Identities = 47/63 (74%), Positives = 53/63 (84%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 EK+EAA+KIK+IKEVRAVT+LGLKEAKE VEKAP VV+SGL KEEA L KLKA GA V Sbjct: 105 EKYEAAAKIKIIKEVRAVTDLGLKEAKELVEKAPVVVRSGLPKEEAEALAAKLKAAGAAV 164
Query: 251 VME 243 +E Sbjct: 165 ALE 167
>tr|Q6I629|Q6I629_ORYSJ Os05g0554100 protein OS=Oryza sativa subsp. japonica GN=OJ1263_E10.8 PE=2 SV=1 Length = 198
Score = 89.0 bits (219), Expect = 1e-16 Identities = 43/63 (68%), Positives = 55/63 (87%) Frame = -3
Query: 431 EKFEAASKIKVIKEVRAVTNLGLKEAKEFVEKAPGVVKSGLTKEEAAQLMEKLKAVGATV 252 E F+AASKIKVIKE+R+ T+LGLKEAKE VEKAP V+K G++KEEA +++K+KAVGA V Sbjct: 136 EAFDAASKIKVIKEIRSFTDLGLKEAKELVEKAPAVIKGGVSKEEARTIIDKMKAVGAKV 195
Query: 251 VME 243 VM+ Sbjct: 196 VMD 198
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