BP913714 |
Clone id |
YMU001_000033_D12 |
Library |
YMU01 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000033_D12. |
Accession |
BP913714 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL163Contig1 |
Sequence |
CAATTACAGCAATTACATTCAAACCTTTCGACTGAAAAGGCAGAAGATGTTATTTAGGTA TGCGAGAATGAGCTGCAATAAAGGTCCATCTTCACAATGTTCCTCATTTGCAGTATGGAT ACACGGAAAGACTCTAAAGAGCCAAGACATACAGTAGTTCCCTGTCCATGGCTTAGGTCC ACAAAACTCAAGCCATTGTATTTACAAGGCCAGCAACAAAGCAAAACTGTAGAGAAAGCA TGCGAGGGGAAGGGAAAATTATCTTCACTCCTTTCCAGCTACTCTTTCACAGCTCCGGTG ATCTTACCCTTTAGCTCCTCAATTTCCACGGCTAGCTCCTTCCTGCTCTCCTTAAAAAGA AGGTATCTGTACACAAACCAACCACTGTAGCCAAGACCAACGAGTTCCAAAACCTTAGGA AGCAGCGGAACTGAGTTCACAGCTCCAACAATTGTTGACGAAAACCACAACGCGACCAGG GCACCTCCTCCATAAATCAAAACATTTGTCTTGTTCTCAATAGCATCCCACTTGGCTTTC AAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04616 |
Definition |
sp|O04616|Y4115_ARATH Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana |
Align length |
84 |
Score (bit) |
138.0 |
E-value |
2.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913714|Adiantum capillus-veneris mRNA, clone: YMU001_000033_D12. (543 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O04616|Y4115_ARATH Uncharacterized protein At4g01150, chlorop... 138 2e-32 sp|Q8LCA1|TMP14_ARATH Thylakoid membrane phosphoprotein 14 kDa, ... 69 1e-11 sp|Q8YX97|SYV_ANASP Valyl-tRNA synthetase OS=Anabaena sp. (strai... 45 3e-04 sp|Q4PDT1|DBP3_USTMA ATP-dependent RNA helicase DBP3 OS=Ustilago... 34 0.40 sp|Q3HXY8|NGFV2_PSETE Venom nerve growth factor 2 OS=Pseudonaja ... 32 2.0 sp|Q3HXY9|NGFV1_PSETE Venom nerve growth factor 1 OS=Pseudonaja ... 32 2.0 sp|Q46VW9|MNMG_RALEJ tRNA uridine 5-carboxymethylaminomethyl mod... 31 3.4 sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FE... 31 3.4 sp|Q08378|GOGA3_HUMAN Golgin subfamily A member 3 OS=Homo sapien... 31 4.5 sp|Q65K13|COXX_BACLD Protoheme IX farnesyltransferase OS=Bacillu... 31 4.5 sp|Q3TMH2|SCRN3_MOUSE Secernin-3 OS=Mus musculus GN=Scrn3 PE=2 SV=1 30 7.6 sp|Q09024|IMPL2_DROME Neural/ectodermal development factor IMP-L... 30 7.6 sp|P64594|YHAV_ECOLI Uncharacterized protein yhaV OS=Escherichia... 30 7.6 sp|P64595|YHAV_ECO57 Uncharacterized protein yhaV OS=Escherichia... 30 7.6 sp|P55937|GOGA3_MOUSE Golgin subfamily A member 3 OS=Mus musculu... 30 9.9
>sp|O04616|Y4115_ARATH Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1 Length = 164
Score = 138 bits (347), Expect = 2e-32 Identities = 64/84 (76%), Positives = 74/84 (88%) Frame = -2
Query: 542 LKAKWDAIENKTNVLIYGGGALVALWFSSTIVGAVNSVPLLPKVLELVGLGYSGWFVYRY 363 LK KWD +ENK+ VLIYGGGA+VA+W SS +VGA+NSVPLLPKV+ELVGLGY+GWFVYRY Sbjct: 80 LKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRY 139
Query: 362 LLFKESRKELAVEIEELKGKITGA 291 LLFK SRKELA +IE LK KI G+ Sbjct: 140 LLFKSSRKELAEDIESLKKKIAGS 163
>sp|Q8LCA1|TMP14_ARATH Thylakoid membrane phosphoprotein 14 kDa, chloroplastic OS=Arabidopsis thaliana GN=TMP14 PE=1 SV=2 Length = 174
Score = 68.9 bits (167), Expect = 1e-11 Identities = 30/80 (37%), Positives = 52/80 (65%) Frame = -2
Query: 530 WDAIENKTNVLIYGGGALVALWFSSTIVGAVNSVPLLPKVLELVGLGYSGWFVYRYLLFK 351 W+ +++K + +VALW S+ ++ A++ +PL+P VLELVG+GY+GWF Y+ L+FK Sbjct: 94 WEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFK 153
Query: 350 ESRKELAVEIEELKGKITGA 291 R+ L +++ I G+ Sbjct: 154 PDREALFEKVKSTYKDILGS 173
>sp|Q8YX97|SYV_ANASP Valyl-tRNA synthetase OS=Anabaena sp. (strain PCC 7120) GN=valS PE=3 SV=1 Length = 1014
Score = 44.7 bits (104), Expect = 3e-04 Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Frame = -2
Query: 512 KTNVLIYGGGALVALWFSSTIVGAVNSVPLLPKVLELVGLGYSGWFVYRYLLFKESRKEL 333 KT L+ G LV L + + V++VP L E+VGLGYS WFV R LL +RK Sbjct: 846 KTIGLVIAG--LVFLRVALAVADTVDNVPFLGTFFEIVGLGYSAWFVTRNLLSTPARKRF 903
Query: 332 AVEI--EELKGKITGAVKE*LERSE 264 + + ++G V++ E +E Sbjct: 904 LAKFFAPPTEKNLSGTVQQAPEAAE 928
>sp|Q4PDT1|DBP3_USTMA ATP-dependent RNA helicase DBP3 OS=Ustilago maydis GN=DBP3 PE=3 SV=1 Length = 585
Score = 34.3 bits (77), Expect = 0.40 Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Frame = -2
Query: 329 VEIEELKGKITGAVKE*LERSEDNFPFPSHAFSTVLLCCWPCKYNGLSFVDLSH-GQGTT 153 V+ EL GK+ AVK+ L+ + P P A CCWP V ++ G G T Sbjct: 157 VDFRELDGKVDAAVKKTLDSQGFSTPTPIQA------CCWPVLLQNKDVVGIAETGSGKT 210
Query: 152 VCLG 141 G Sbjct: 211 FAFG 214
>sp|Q3HXY8|NGFV2_PSETE Venom nerve growth factor 2 OS=Pseudonaja textilis PE=2 SV=1 Length = 243
Score = 32.0 bits (71), Expect = 2.0 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = +2
Query: 77 NKGPSSQCSSFAVWIHGKTLKSQDIQ*FPVHGLGPQNSSHCIYK 208 N+G S C S +VW+ KT K+ DI+ PV + N ++ +YK Sbjct: 132 NRGEYSVCDSISVWVANKT-KAMDIKGKPVTVMVDVNLNNHVYK 174
>sp|Q3HXY9|NGFV1_PSETE Venom nerve growth factor 1 OS=Pseudonaja textilis PE=2 SV=1 Length = 243
Score = 32.0 bits (71), Expect = 2.0 Identities = 17/44 (38%), Positives = 26/44 (59%) Frame = +2
Query: 77 NKGPSSQCSSFAVWIHGKTLKSQDIQ*FPVHGLGPQNSSHCIYK 208 N+G S C S +VW+ KT K+ DI+ PV + N ++ +YK Sbjct: 132 NRGEYSVCDSISVWVANKT-KAMDIKGKPVTVMVDVNLNNHVYK 174
>sp|Q46VW9|MNMG_RALEJ tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG OS=Ralstonia eutropha (strain JMP134) GN=mnmG PE=3 SV=1 Length = 646
Score = 31.2 bits (69), Expect = 3.4 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -2
Query: 533 KWDAIENKTNVLIYGGGALVALWFSSTIVGAVNSVPLLPKVLE 405 +WDA K + + L + W + TI+ A ++VPLL K +E Sbjct: 463 RWDAFNRKRDAVSRETERLKSTWVNPTILPAEDAVPLLGKPIE 505
>sp|A0AVI2|FR1L5_HUMAN Fer-1-like protein 5 OS=Homo sapiens GN=FER1L5 PE=2 SV=2 Length = 2093
Score = 31.2 bits (69), Expect = 3.4 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 2/79 (2%) Frame = +2
Query: 47 MLFRYARMSCNKGPSSQCSSFAVWIHGKTLKSQDIQ*FP--VHGLGPQNSSHCIYKASNK 220 +L RYA+ P AV+ +GK K Q + VHGLGP+ +Y + Sbjct: 1636 LLERYAKRKGLPPPLFSPEEDAVFYNGKKFKLQSFEPKTPTVHGLGPKKERLALYLLHTQ 1695
Query: 221 AKL*RKHARGRENYLHSFP 277 L +H R Y HS P Sbjct: 1696 G-LVPEHVETRTLYSHSQP 1713
>sp|Q08378|GOGA3_HUMAN Golgin subfamily A member 3 OS=Homo sapiens GN=GOLGA3 PE=1 SV=2 Length = 1498
Score = 30.8 bits (68), Expect = 4.5 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = -2
Query: 416 KVLELVG-LGYSGWFVYRYLLFKESRKELAVEIEELKGKITG 294 KVLEL L S F + +ES K+LA+E+E KGK+TG Sbjct: 1082 KVLELEDELQESRGFRKKIKRLEESNKKLALELEHEKGKLTG 1123
>sp|Q65K13|COXX_BACLD Protoheme IX farnesyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ctaB PE=3 SV=1 Length = 308
Score = 30.8 bits (68), Expect = 4.5 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -2
Query: 473 ALWFSSTIVGAVNSVPLLPKVLELVGLGYSGWFVYRYLLFKESRKELAVEIEELKGKITG 294 ALWF ++ A+ + LL L G+G+ G F Y +L S++ V + G ++G Sbjct: 110 ALWFG-ILLTALGFIMLLMTNLTAAGVGFVGVFTYVFLYTMWSKRRYTV--NTIIGSVSG 166
Query: 293 AV 288 AV Sbjct: 167 AV 168
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S558 |
Definition |
tr|A9S558|A9S558_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
83 |
Score (bit) |
146.0 |
E-value |
6.0e-34 |
Report |
|