BP913734
Clone id YMU001_000033_F08
Library
Length 566
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATGTGTCAGAGCATAAAGGAAAGTGGAAGTAGTATTTGCCATTGGTGGAGTATGCATACA
ATAATACAGTGGATTCATCAACTGACAAGGCACCTTTTGAGATAGTTGAAGGTGGCAAGA
AAGTTTCTCCCATACTGCATACAAAGGACAAGATATTTGAAGCAGACAAGTATGTTCAAG
ACATGGATGAAATGTACAAGAAGGTCAAAGTGGCCTTAGAAAAGACTCAGGCAAAGCAAA
AGAAAGCAGCTGATCGTCACTGTCGTGAAGTGGTATTTTCACTTGGTGATTGGGTGCTTC
TACGCTTTGAAAAGGCAAGGTTAAAGAAGATGAAAGGCAAGGAAAGACTGTTTCCAAAGC
TCAGCATGCGTTAGTGTGGGCCTTTTCAAGTATGCGACATAATCAGTGATGTTGCATATA
GGCTGAAATTGCCTGACAGTTGGAAGATTCACAATGCGTTTCATGTGAGTCTTCTCAGAC
CCTATGTGAGTGATGTGCCAGACGATATGCCAGCTGAAGATCAGCCGGAAGTCGATGAAC
TTGACGAGATCTTGGTCCCGGAACAG
■■Homology search results ■■ -
sp_hit_id Q9UR07
Definition sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe
Align length 186
Score (bit) 65.9
E-value 1.0e-10
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913734|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_F08.
(566 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 66 1e-10
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 66 1e-10
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 66 1e-10
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 64 4e-10
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 63 1e-09
sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from tra... 46 1e-04
sp|Q057H8|SYA_BUCCC Alanyl-tRNA synthetase OS=Buchnera aphidicol... 33 0.75
sp|Q9P2P1|K1305_HUMAN Integrase catalytic domain-containing prot... 32 1.7
sp|P0C6F3|R1A_BEV Replicase polyprotein 1a OS=Berne virus GN=1a ... 31 3.7
sp|P0C6V7|R1AB_BEV Replicase polyprotein 1ab OS=Berne virus GN=r... 31 3.7
sp|Q6P0D0|QKIA_DANRE Protein quaking-A OS=Danio rerio GN=qkia PE... 31 3.7
sp|Q5DTZ0|K1305_MOUSE Integrase catalytic domain-containing prot... 31 3.7
sp|Q6CTC3|NST1_KLULA Stress response protein NST1 OS=Kluyveromyc... 31 4.9
sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus... 31 4.9
sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Hom... 31 4.9
sp|P15969|TOG1A_AGEAP Omega-agatoxin-1A OS=Agelenopsis aperta PE... 30 6.4
sp|Q9ZLB5|TILS_HELPJ tRNA(Ile)-lysidine synthase OS=Helicobacter... 30 6.4
sp|Q08645|FOLE_YEAST Folylpolyglutamate synthase OS=Saccharomyce... 30 6.4
sp|Q9ZCA6|Y854_RICPR Uncharacterized protein RP854 OS=Rickettsia... 30 8.3

>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
Length = 1333

Score = 65.9 bits (159), Expect = 1e-10
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Frame = +3

Query: 6 SEHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHTKDKIFEADKYVQDM 185
S H W ++ LV+ +YNN + S+T PFEIV L + D+ Q+
Sbjct: 1101 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQET 1160

Query: 186 DEMYKKVKVALEKTQAKQKKAADRHCREV-VFSLGDWVLLRFEKARLKKMKGKERLFPKL 362
++++ VK L K KK D +E+ F GD V+++ K + +L P
Sbjct: 1161 IQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF--LHKSNKLAPSF 1218

Query: 363 SMR*CGPFQVCDIISDVAYRLKLPDSWK--IHNAFHVSLLRPYVSDVPDDMPAEDQPEVD 536
+ GPF V Y L LPDS K + FHVS L Y + + D+ ++
Sbjct: 1219 A----GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELNYATIDESDIG 1274

Query: 537 ELDEIL 554
+ IL
Sbjct: 1275 TILHIL 1280


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
Length = 1333

Score = 65.9 bits (159), Expect = 1e-10
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Frame = +3

Query: 6 SEHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHTKDKIFEADKYVQDM 185
S H W ++ LV+ +YNN + S+T PFEIV L + D+ Q+
Sbjct: 1101 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQET 1160

Query: 186 DEMYKKVKVALEKTQAKQKKAADRHCREV-VFSLGDWVLLRFEKARLKKMKGKERLFPKL 362
++++ VK L K KK D +E+ F GD V+++ K + +L P
Sbjct: 1161 IQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF--LHKSNKLAPSF 1218

Query: 363 SMR*CGPFQVCDIISDVAYRLKLPDSWK--IHNAFHVSLLRPYVSDVPDDMPAEDQPEVD 536
+ GPF V Y L LPDS K + FHVS L Y + + D+ ++
Sbjct: 1219 A----GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELNYATIDESDIG 1274

Query: 537 ELDEIL 554
+ IL
Sbjct: 1275 TILHIL 1280


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
Length = 1333

Score = 65.9 bits (159), Expect = 1e-10
Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Frame = +3

Query: 6 SEHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHTKDKIFEADKYVQDM 185
S H W ++ LV+ +YNN + S+T PFEIV L + D+ Q+
Sbjct: 1101 STHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQET 1160

Query: 186 DEMYKKVKVALEKTQAKQKKAADRHCREV-VFSLGDWVLLRFEKARLKKMKGKERLFPKL 362
++++ VK L K KK D +E+ F GD V+++ K + +L P
Sbjct: 1161 IQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTKTGF--LHKSNKLAPSF 1218

Query: 363 SMR*CGPFQVCDIISDVAYRLKLPDSWK--IHNAFHVSLLRPYVSDVPDDMPAEDQPEVD 536
+ GPF V Y L LPDS K + FHVS L Y + + D+ ++
Sbjct: 1219 A----GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYRHNSELNYATIDESDIG 1274

Query: 537 ELDEIL 554
+ IL
Sbjct: 1275 TILHIL 1280


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
Length = 1547

Score = 64.3 bits (155), Expect = 4e-10
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Frame = +3

Query: 24 WK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHTKDKI----FEADKYVQDMDE 191
W YLP +E+ YN+T + K+PFEI G +P + + D++ F A + + +
Sbjct: 1293 WHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVELAKHLKA 1352

Query: 192 MYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKERLFPKLSMR 371
+ + K LE Q + + ++ + ++ ++GD VL+ + K+ + K+
Sbjct: 1353 LTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH------RDAYFKKGAYMKVQQI 1406

Query: 372 *CGPFQVCDIISDVAYRLKLPDSWKIHNAFHVSLLRPYVSDVPDDMP 512
GPF+V I+D AY L L K H +V L+ +V PD P
Sbjct: 1407 YVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKKFVYR-PDAYP 1452


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
Length = 1498

Score = 62.8 bits (151), Expect = 1e-09
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 4/163 (2%)
Frame = +3

Query: 3 VSEHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHTKDKI----FEADK 170
VS + W YLP +E+ YN+T + K+PFEI G +P + + D++ F A +
Sbjct: 1312 VSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEIDLGYLPNTPAIKSDDEVNARSFTAVE 1371

Query: 171 YVQDMDEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKERL 350
+ + + + K LE Q + + ++ + ++ ++GD VL+ + K+
Sbjct: 1372 LAKHLKALTIQTKEQLEHAQIEMETNNNQRRKPLLLNIGDHVLVH------RDAYFKKGA 1425

Query: 351 FPKLSMR*CGPFQVCDIISDVAYRLKLPDSWKIHNAFHVSLLR 479
+ K+ GPF+V I+D AY L L K H +V L+
Sbjct: 1426 YMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLK 1468


>sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from
transposon 412 OS=Drosophila melanogaster GN=POL PE=4
SV=1
Length = 1237

Score = 45.8 bits (107), Expect = 1e-04
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 8/138 (5%)
Frame = +3

Query: 3 VSEHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPI----LHTKDKIFEADK 170
+S K W +L Y +N T + P+E+V G P LH+ + I+ D
Sbjct: 1081 ISTDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTSNLPKHFNKLHSIEPIYNIDD 1140

Query: 171 YVQD----MDEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKG 338
Y ++ ++ Y + + LE + K K+ D +++ +GD VLLR E
Sbjct: 1141 YAKESKYRLEVAYARARKLLEAHKEKNKENYDLKVKDIELEVGDKVLLRNEVGH------ 1194

Query: 339 KERLFPKLSMR*CGPFQV 392
KL + GP+++
Sbjct: 1195 ------KLDFKYTGPYKI 1206


>sp|Q057H8|SYA_BUCCC Alanyl-tRNA synthetase OS=Buchnera aphidicola
subsp. Cinara cedri GN=alaS PE=3 SV=1
Length = 881

Score = 33.5 bits (75), Expect = 0.75
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +3

Query: 42 LVEYAYNNTVDSSTDKAPFEIVEGG---KKVSPILHTKDKIFEADKYVQDMDEMYKKVKV 212
LV +N K P ++ G +++S IL IF + ++Q ++ + KK+K+
Sbjct: 213 LVFMEFNQITKKKIIKLPIPSIDTGMGLERISVILQNVKSIFHTNNFIQLIEAIKKKIKI 272

Query: 213 ALEKTQAKQKKAADRHCR 266
++K K H R
Sbjct: 273 KIKKKNNVSLKIISDHIR 290


>sp|Q9P2P1|K1305_HUMAN Integrase catalytic domain-containing protein
KIAA1305 OS=Homo sapiens GN=KIAA1305 PE=2 SV=3
Length = 1898

Score = 32.3 bits (72), Expect = 1.7
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Frame = +3

Query: 12 HKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGK-----------KVSPILHTKDKIF 158
H KW LPL+ A+ SSTD PF+++ GG+ + I K +F
Sbjct: 1733 HGKKWAASLPLLHLAFRA---SSTDATPFKVLTGGESRLTEPLWWEMSSANIEGLKMDVF 1789

Query: 159 EADKYVQDMDEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKG 338
+ ++ ++ A EK + ++ K R +E +++GD VLL L +
Sbjct: 1790 LLQLVGELLELHWRVADKASEKAENRRFK---RESQEKEWNVGDQVLL------LSLPRN 1840

Query: 339 KERLFPKLSMR*CGPFQVCDIISDVAYRL-KLPDSWKIHNAFHVSLLRPY 485
S + GPF + D +S YR+ P K+ + SL++ +
Sbjct: 1841 GS------SAKWVGPFYIGDRLSLSLYRIWGFPTPEKLGCIYPSSLMKAF 1884


>sp|P0C6F3|R1A_BEV Replicase polyprotein 1a OS=Berne virus GN=1a PE=1
SV=1
Length = 4569

Score = 31.2 bits (69), Expect = 3.7
Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 28/116 (24%)
Frame = +3

Query: 6 SEHKGKWK*YLPLVE---------YAYNNTVDSSTDKAPFEIVEGG-------------- 116
S++ G W YLP VE Y T+ ++ APF I++ G
Sbjct: 1485 SKYSGVWLGYLPSVEECKIAQVNHRVYVPTILRTSKSAPFHIIQNGDMGRGPITVTYHYA 1544

Query: 117 -----KKVSPILHTKDKIFEADKYVQDMDEMYKKVKVALEKTQAKQKKAADRHCRE 269
K ++P+ ++FE K D+++K A +QKK C E
Sbjct: 1545 KNFDNKSLTPMFKMFQQVFEKSK-----DDIFK----AFNTMSLEQKKVLSHFCGE 1591


>sp|P0C6V7|R1AB_BEV Replicase polyprotein 1ab OS=Berne virus GN=rep
PE=1 SV=1
Length = 6857

Score = 31.2 bits (69), Expect = 3.7
Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 28/116 (24%)
Frame = +3

Query: 6 SEHKGKWK*YLPLVE---------YAYNNTVDSSTDKAPFEIVEGG-------------- 116
S++ G W YLP VE Y T+ ++ APF I++ G
Sbjct: 1485 SKYSGVWLGYLPSVEECKIAQVNHRVYVPTILRTSKSAPFHIIQNGDMGRGPITVTYHYA 1544

Query: 117 -----KKVSPILHTKDKIFEADKYVQDMDEMYKKVKVALEKTQAKQKKAADRHCRE 269
K ++P+ ++FE K D+++K A +QKK C E
Sbjct: 1545 KNFDNKSLTPMFKMFQQVFEKSK-----DDIFK----AFNTMSLEQKKVLSHFCGE 1591


tr_hit_id Q9ZS84
Definition tr|Q9ZS84|Q9ZS84_SOLLC Polyprotein OS=Solanum lycopersicum
Align length 174
Score (bit) 107.0
E-value 6.0e-22
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913734|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_F08.
(566 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9ZS84|Q9ZS84_SOLLC Polyprotein OS=Solanum lycopersicum PE=4 ... 107 6e-22
tr|Q9ZVK3|Q9ZVK3_ARATH Putative retroelement pol polyprotein OS=... 105 2e-21
tr|A5C5K2|A5C5K2_VITVI Putative uncharacterized protein OS=Vitis... 102 1e-20
tr|Q8RU68|Q8RU68_ORYSA Putative 22 kDa kafirin cluster; Ty3-Gyps... 102 1e-20
tr|Q7G6A5|Q7G6A5_ORYSJ Putative 22 kDa kafirin cluster; Ty3-Gyps... 102 1e-20
tr|Q0D854|Q0D854_ORYSJ Os07g0184100 protein OS=Oryza sativa subs... 102 2e-20
tr|A5AQU5|A5AQU5_VITVI Putative uncharacterized protein OS=Vitis... 101 3e-20
tr|Q3C0I1|Q3C0I1_LOTJA Putative uncharacterized protein OS=Lotus... 100 6e-20
tr|Q3C0H8|Q3C0H8_LOTJA Putative uncharacterized protein OS=Lotus... 100 6e-20
tr|Q3C0I2|Q3C0I2_LOTJA Putative uncharacterized protein OS=Lotus... 99 1e-19
tr|A5CAD1|A5CAD1_VITVI Putative uncharacterized protein OS=Vitis... 99 1e-19
tr|A5BZW2|A5BZW2_VITVI Putative uncharacterized protein OS=Vitis... 99 2e-19
tr|Q9SJ92|Q9SJ92_ARATH Putative retroelement pol polyprotein OS=... 99 2e-19
tr|A5BBP7|A5BBP7_VITVI Putative uncharacterized protein OS=Vitis... 98 3e-19
tr|Q7XKR1|Q7XKR1_ORYSJ OSJNBa0053B21.10 protein OS=Oryza sativa ... 98 4e-19
tr|Q6UUR9|Q6UUR9_ORYSJ Putative gag-pol protein OS=Oryza sativa ... 98 4e-19
tr|Q0JDN8|Q0JDN8_ORYSJ Os04g0389000 protein (Fragment) OS=Oryza ... 98 4e-19
tr|Q0J6I3|Q0J6I3_ORYSJ Os08g0317200 protein OS=Oryza sativa subs... 98 4e-19
tr|A5B925|A5B925_VITVI Putative uncharacterized protein OS=Vitis... 98 4e-19
tr|Q0JKY7|Q0JKY7_ORYSJ Os01g0640000 protein OS=Oryza sativa subs... 97 5e-19
tr|A5C7C2|A5C7C2_VITVI Putative uncharacterized protein OS=Vitis... 97 5e-19
tr|Q9XIG5|Q9XIG5_ARATH T10P12.3 protein OS=Arabidopsis thaliana ... 97 6e-19
tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1 97 6e-19
tr|Q9XE44|Q9XE44_ARATH Putative retroelement pol polyprotein OS=... 97 8e-19
tr|Q7XW84|Q7XW84_ORYSJ OSJNBa0019J05.10 protein OS=Oryza sativa ... 97 8e-19
tr|Q7XPN0|Q7XPN0_ORYSJ OSJNBa0060D06.14 protein OS=Oryza sativa ... 97 8e-19
tr|Q7F2E9|Q7F2E9_ORYSJ Putative polyprotein OS=Oryza sativa subs... 97 8e-19
tr|Q6F330|Q6F330_ORYSJ Putative polyprotein OS=Oryza sativa subs... 97 8e-19
tr|Q53PM7|Q53PM7_ORYSJ Retrotransposon protein, putative, Ty3-gy... 97 8e-19
tr|Q53PM6|Q53PM6_ORYSJ Retrotransposon gag protein, putative OS=... 97 8e-19

>tr|Q9ZS84|Q9ZS84_SOLLC Polyprotein OS=Solanum lycopersicum PE=4 SV=1
Length = 1542

Score = 107 bits (266), Expect = 6e-22
Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 7/174 (4%)
Frame = +3

Query: 3 VSEHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHTKDK----IFEADK 170
V+ + W L ++ YN S+T+ +PFEIV G + ++P+ K K A +
Sbjct: 1279 VTASQRNWVELLDTAQFCYNLHKSSATEMSPFEIVLGKQPMTPLDVAKSKNQGKCPAAYR 1338

Query: 171 YVQDMDEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKER- 347
+D EM + + +L K Q + KK AD+H R V FS+GD VLL+ K++ K R
Sbjct: 1339 VARDRLEMLSEAQDSLRKAQQRMKKYADQHRRSVEFSVGDKVLLKLTPQIWKQIVSKTRH 1398

Query: 348 --LFPKLSMR*CGPFQVCDIISDVAYRLKLPDSWKIHNAFHVSLLRPYVSDVPD 503
L PK GPF+V + +VAYRLKLP+ KIH FHVS L+PY +D D
Sbjct: 1399 RGLIPKYD----GPFEVVKRVGEVAYRLKLPERLKIHPTFHVSFLKPYFADEDD 1448


>tr|Q9ZVK3|Q9ZVK3_ARATH Putative retroelement pol polyprotein
OS=Arabidopsis thaliana GN=At2g14640 PE=2 SV=1
Length = 945

Score = 105 bits (262), Expect = 2e-21
Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Frame = +3

Query: 3 VSEHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPI-LHTKDKIF--EADKY 173
V H +W ++P EY YN T +ST PF+ + G + SPI + + E ++
Sbjct: 705 VHYHPKQWSSFIPWAEYWYNTTFHASTGMTPFQALYG-RPPSPIPAYELGSVVCGELNEQ 763

Query: 174 VQDMDEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKERLF 353
+ DE+ ++K L K+ AD R+V F +GDWVLLR + R K + R
Sbjct: 764 MAARDELLAELKQHLVTANNCMKQQADSRLRDVSFQVGDWVLLRIQPYRQKTLF--RRSS 821

Query: 354 PKLSMR*CGPFQVCDIISDVAYRLKLPDSWKIHNAFHVSLLRPYVSDVPDDM 509
KLS R GPFQV +VAYRL LP+ +IH FHVSLL+P+V D DM
Sbjct: 822 QKLSHRFYGPFQVASKHGEVAYRLTLPEGTRIHPVFHVSLLKPWVGDGEPDM 873


>tr|A5C5K2|A5C5K2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_039388 PE=4 SV=1
Length = 1360

Score = 102 bits (255), Expect = 1e-20
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Frame = +3

Query: 9 EHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEG--GKKVSPILHTKDKIFEADKYVQD 182
+H KW ++P E++YN ++ SST FE V ++ + + D+Y++D
Sbjct: 1177 DHPRKWLEWIPXXEFSYNTSIHSSTKMTXFEAVYXILPPRLLAYVPGTSXVQAVDEYLRD 1236

Query: 183 MDEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKERLFPKL 362
D + ++++ L + Q + K AD+H R+ F++GD+V L+ + R + + + KL
Sbjct: 1237 RDAILRELRYNLLQAQNRMKCQADQHRRDASFAVGDYVYLKLQPYRQTSVAFRGSM--KL 1294

Query: 363 SMR*CGPFQVCDIISDVAYRLKLPDSWKIHNAFHVSLLRPYVSDVPDDMPAEDQPEVDEL 542
+ R GP+QV + + VAY+L LP +IHN FHVSLLR ++ + +P P V +
Sbjct: 1295 APRFFGPYQVIEKVGSVAYKLALPPGSQIHNVFHVSLLRRHLGSITPTLPI---PPVSDT 1351

Query: 543 DEILVPE 563
I PE
Sbjct: 1352 SIIFKPE 1358


>tr|Q8RU68|Q8RU68_ORYSA Putative 22 kDa kafirin cluster; Ty3-Gypsy
type OS=Oryza sativa GN=OSJNBa0022D10.4 PE=4 SV=1
Length = 1230

Score = 102 bits (254), Expect = 1e-20
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Frame = +3

Query: 3 VSEHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHTK--DKIFEADKYV 176
+ E KG W+ ++PL E+AYNN+ SS AP+E + G K +P+ + ++ +
Sbjct: 980 ILEFKGSWEEFMPLAEFAYNNSYQSSIRMAPYEALYGRKCRTPVCWNEVGERKLLGPDII 1039

Query: 177 QDMDEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKER--L 350
Q E + ++ L+ Q +QK D R++ F +GDWV L ++ MKG +R L
Sbjct: 1040 QQTKETIRLIRKRLQTAQNRQKSYVDNRRRDLRFDIGDWVYL-----KVSPMKGVKRFGL 1094

Query: 351 FPKLSMR*CGPFQVCDIISDVAYRLKLPDSW-KIHNAFHVSLLR 479
KLS R GPF + I +VAY++KLPD+ +H+ FH+S++R
Sbjct: 1095 GKKLSPRYVGPFAIVKRIGEVAYKVKLPDALIGVHDVFHISMIR 1138


>tr|Q7G6A5|Q7G6A5_ORYSJ Putative 22 kDa kafirin cluster; Ty3-Gypsy
type (Retrotransposon protein, putative, Ty3-gypsy
subclass) OS=Oryza sativa subsp. japonica
GN=OSJNAb0075K12.33 PE=4 SV=1
Length = 1230

Score = 102 bits (254), Expect = 1e-20
Identities = 58/164 (35%), Positives = 93/164 (56%), Gaps = 5/164 (3%)
Frame = +3

Query: 3 VSEHKGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHTK--DKIFEADKYV 176
+ E KG W+ ++PL E+AYNN+ SS AP+E + G K +P+ + ++ +
Sbjct: 980 ILEFKGSWEEFMPLAEFAYNNSYQSSIRMAPYEALYGRKCRTPVCWNEVGERKLLGPDII 1039

Query: 177 QDMDEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKER--L 350
Q E + ++ L+ Q +QK D R++ F +GDWV L ++ MKG +R L
Sbjct: 1040 QQTKETIRLIRKRLQTAQNRQKSYVDNRRRDLRFDIGDWVYL-----KVSPMKGVKRFGL 1094

Query: 351 FPKLSMR*CGPFQVCDIISDVAYRLKLPDSW-KIHNAFHVSLLR 479
KLS R GPF + I +VAY++KLPD+ +H+ FH+S++R
Sbjct: 1095 GKKLSPRYVGPFAIVKRIGEVAYKVKLPDALIGVHDVFHISMIR 1138


>tr|Q0D854|Q0D854_ORYSJ Os07g0184100 protein OS=Oryza sativa subsp.
japonica GN=Os07g0184100 PE=4 SV=1
Length = 332

Score = 102 bits (253), Expect = 2e-20
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 6/169 (3%)
Frame = +3

Query: 24 WK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHTKD----KIFEADKYVQDMDE 191
W +LP EY YN + SS +PF +V G + P LH + ++ + +QD DE
Sbjct: 79 WLRWLPWAEYCYNTSYQSSLRTSPFRVVYG--REPPTLHAYEPGSTRLPAVQQAMQDRDE 136

Query: 192 MYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKM--KGKERLFPKLS 365
+ ++ LE+ Q K A D R + FS+GDWV LR + + G+ +L PK
Sbjct: 137 FLRAIRDRLEQAQQTHKSAYDGKHRALEFSVGDWVWLRLLHRPMASLGVAGRGKLGPKFY 196

Query: 366 MR*CGPFQVCDIISDVAYRLKLPDSWKIHNAFHVSLLRPYVSDVPDDMP 512
GP++V + I +AYRL+LP ++H+ FHV LL+P+ PD +P
Sbjct: 197 ----GPYRVAERIGSMAYRLQLPPGARLHDVFHVGLLKPFRGTPPDSVP 241


>tr|A5AQU5|A5AQU5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_015014 PE=4 SV=1
Length = 596

Score = 101 bits (251), Expect = 3e-20
Identities = 66/187 (35%), Positives = 98/187 (52%), Gaps = 3/187 (1%)
Frame = +3

Query: 15 KGKWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPIL--HTKDKIFEADKYVQDMD 188
+G W +LPLVE+AYNN+ +S PFE + G K SPI ++ + VQ
Sbjct: 358 QGNWDDHLPLVEFAYNNSFQASIGMTPFEALYGRKCRSPICWNDVGERKLLGPELVQLTV 417

Query: 189 EMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKERLFPKLSM 368
E +K L+ TQ++ K ADR R++ F +GD V L+ + G++ KLS
Sbjct: 418 EKVALIKERLKTTQSRHKSYADRRRRDLEFEVGDHVFLKVSPMKYVMRFGRK---GKLSP 474

Query: 369 R*CGPFQVCDIISDVAYRLKLPDSW-KIHNAFHVSLLRPYVSDVPDDMPAEDQPEVDELD 545
R GPF++ + + +AY++ LP S K+HN FHVS LR Y+ D + E ++L
Sbjct: 475 RFVGPFEILERVGTLAYKVALPPSLSKVHNVFHVSTLRKYIYDPSHVVELEPIQIFEDLT 534

Query: 546 EILVPEQ 566
VP Q
Sbjct: 535 YEEVPVQ 541


>tr|Q3C0I1|Q3C0I1_LOTJA Putative uncharacterized protein OS=Lotus
japonicus PE=4 SV=1
Length = 1508

Score = 100 bits (249), Expect = 6e-20
Identities = 64/169 (37%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Frame = +3

Query: 21 KWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHT----KDKIFEA-DKYVQDM 185
+W +LPL E+ YN T S+ P+E+V G P +H + I EA D+
Sbjct: 1271 EWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQP---PAIHLPYCPQSTIVEAVDRSFTAR 1327

Query: 186 DEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKERLFPKLS 365
++M +K+ L + QA+ K AD+H + FS+GDWVLL+ + R + + R KLS
Sbjct: 1328 EQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYR--QSSTQHRASEKLS 1385

Query: 366 MR*CGPFQVCDIISDVAYRLKLPDSWKIHNAFHVSLLRPYVSDVPDDMP 512
R GP+QV + VAY L LP KIH FHVSLL+P S +P
Sbjct: 1386 PRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLLKPCPSPAMPHVP 1434


>tr|Q3C0H8|Q3C0H8_LOTJA Putative uncharacterized protein OS=Lotus
japonicus PE=4 SV=1
Length = 1508

Score = 100 bits (249), Expect = 6e-20
Identities = 64/169 (37%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Frame = +3

Query: 21 KWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHT----KDKIFEA-DKYVQDM 185
+W +LPL E+ YN T S+ P+E+V G P +H + I EA D+
Sbjct: 1271 EWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQP---PAIHLPYCPQSTIVEAVDRSFTAR 1327

Query: 186 DEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKERLFPKLS 365
++M +K+ L + QA+ K AD+H + FS+GDWVLL+ + R + + R KLS
Sbjct: 1328 EQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYR--QSSTQHRASEKLS 1385

Query: 366 MR*CGPFQVCDIISDVAYRLKLPDSWKIHNAFHVSLLRPYVSDVPDDMP 512
R GP+QV + VAY L LP KIH FHVSLL+P S +P
Sbjct: 1386 PRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLLKPCPSPAMPHVP 1434


>tr|Q3C0I2|Q3C0I2_LOTJA Putative uncharacterized protein OS=Lotus
japonicus PE=4 SV=1
Length = 1508

Score = 99.4 bits (246), Expect = 1e-19
Identities = 63/169 (37%), Positives = 90/169 (53%), Gaps = 5/169 (2%)
Frame = +3

Query: 21 KWK*YLPLVEYAYNNTVDSSTDKAPFEIVEGGKKVSPILHT----KDKIFEA-DKYVQDM 185
+W +LPL E+ YN T S+ P+E+V G P +H + I +A D+
Sbjct: 1271 EWVTWLPLAEWWYNTTYHSAIQTTPYEVVYGQP---PAIHLPYCPQSTIVDAVDRSFTAR 1327

Query: 186 DEMYKKVKVALEKTQAKQKKAADRHCREVVFSLGDWVLLRFEKARLKKMKGKERLFPKLS 365
++M +K+ L + QA+ K AD+H + FS+GDWVLL+ + R + + R KLS
Sbjct: 1328 EQMIQKLHANLMRAQARMKIQADKHRTDREFSVGDWVLLKLQPYR--QSSTQHRASEKLS 1385

Query: 366 MR*CGPFQVCDIISDVAYRLKLPDSWKIHNAFHVSLLRPYVSDVPDDMP 512
R GP+QV + VAY L LP KIH FHVSLL+P S +P
Sbjct: 1386 PRFFGPYQVLHRVGKVAYTLALPPESKIHPTFHVSLLKPCPSPAMPHVP 1434