BP913744
Clone id YMU001_000033_G06
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATATTTTATGATACCTCAGAGGAGTTGATGCGAGAGCTTGATATTACAGAAATGGGCAT
GTCTAGATTATCACAGGATGAGGAGCACACTGAGTATGGCAGATACTTGATCGATATGGG
GATTGCACATGGATTGGCCATTTTGAATGGCCTACAGAGATTCCATGTAATAGGTGGTGT
TACATGCTTTCCACATCGGCATGGCGCTTGTCACGAGGACGTGGCAGTTATTAACCATGT
CACAAAGATGTGGCAACTGCTAACCTTGGTTGTTGGTTTCTTTCCAATGGGGTTTATTTT
AGTTGTTTTGAGACCCTCTTCTTGAAGTAGCAAACGGTCGGACATTGCATGGCCAATGTG
AACGGTAGTTTCACCCGCAGATGGGTAATGTGTCTCGATGGCTCTGTATCTCTAGTAAGA
AACGTCCGAGCTGTCACTGATCTCGAGATTCCATGATCTCTCGGAGAGTGGGCTGTCCTC
TGAATAAGGCCTCATACCTGCCTCTGATCTCAGTGTATGCTCTGCA
■■Homology search results ■■ -
sp_hit_id O70554
Definition sp|O70554|SPR2B_MOUSE Small proline-rich protein 2B OS=Mus musculus
Align length 44
Score (bit) 33.1
E-value 0.84
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913744|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_G06.
(526 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O70554|SPR2B_MOUSE Small proline-rich protein 2B OS=Mus muscu... 33 0.84
sp|Q0S888|SYC_RHOSR Cysteinyl-tRNA synthetase OS=Rhodococcus sp.... 30 7.1
sp|P92946|SUT22_ARATH Sulfate transporter 2.2 OS=Arabidopsis tha... 30 7.1
sp|Q7S7L4|NUDFB_NEUCR Nuclear distribution protein pac-1b OS=Neu... 30 7.1
sp|Q03746|CR1FA_BACTA Pesticidal crystal protein cry1Fa OS=Bacil... 30 9.1
sp|A0QAB5|SYC_MYCA1 Cysteinyl-tRNA synthetase OS=Mycobacterium a... 30 9.2
sp|Q743W3|SYC1_MYCPA Cysteinyl-tRNA synthetase 1 OS=Mycobacteriu... 30 9.2

>sp|O70554|SPR2B_MOUSE Small proline-rich protein 2B OS=Mus musculus
GN=Sprr2b PE=2 SV=1
Length = 98

Score = 33.1 bits (74), Expect = 0.84
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2

Query: 204 PCRCGKHVTPPITWNLCRPFKMANPCAIPISIKYLPYSVCSSSC 73
P +C + PP+ C P K PC P+ + P VC C
Sbjct: 29 PPKCPEPCPPPVCCEPCPPPKCPEPCPPPVCCEPCPPPVCCEPC 72


>sp|Q0S888|SYC_RHOSR Cysteinyl-tRNA synthetase OS=Rhodococcus sp.
(strain RHA1) GN=cysS PE=3 SV=1
Length = 464

Score = 30.0 bits (66), Expect = 7.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1

Query: 337 VGHCMANVNGSFTRRWVMCLDGSVSLVRNVRAVTD 441
+GH + V RRW++ D V+ VRNV + D
Sbjct: 39 IGHVRSGVAFDVLRRWLLAHDYDVAFVRNVTDIED 73


>sp|P92946|SUT22_ARATH Sulfate transporter 2.2 OS=Arabidopsis
thaliana GN=SULTR2;2 PE=1 SV=2
Length = 658

Score = 30.0 bits (66), Expect = 7.1
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2

Query: 116 MGIAHGLAILNGLQRFHVIGGVTCFPHRHGACHEDVAVINHVTKMWQLLTLVVGFFPMGF 295
+G G AI+ GLQ+ + G+T F ++ +V + + WQ L V+G + F
Sbjct: 205 VGFMAGAAIVIGLQQLKGLFGLTHFTNKTDVVSVLSSVFHSLHHPWQPLNFVIGSSFLIF 264

Query: 296 ILV 304
IL+
Sbjct: 265 ILL 267


>sp|Q7S7L4|NUDFB_NEUCR Nuclear distribution protein pac-1b
OS=Neurospora crassa GN=pac-1b PE=3 SV=2
Length = 486

Score = 30.0 bits (66), Expect = 7.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Frame = +1

Query: 94 VWQILDRYGDCTWIGHFEWPTEI-PCNRWCYMLSTSA------WRLSRGR 222
+W + Y T +GH +WP + P + Y+LST + W L+ GR
Sbjct: 245 IWDVTTGYCVKTILGHVDWPRAVCPSHDGRYLLSTGSDKSVRLWDLAGGR 294


>sp|Q03746|CR1FA_BACTA Pesticidal crystal protein cry1Fa OS=Bacillus
thuringiensis subsp. aizawai GN=cry1Fa PE=2 SV=1
Length = 1174

Score = 29.6 bits (65), Expect = 9.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3

Query: 179 HHLLHGISVGHSKWPIHVQSPYRSSICHTQCAPH 78
H ++ + G S WP+ VQSP R +CAPH
Sbjct: 765 HETVNVLGTG-SLWPLSVQSPIRKCGEPNRCAPH 797


>sp|A0QAB5|SYC_MYCA1 Cysteinyl-tRNA synthetase OS=Mycobacterium
avium (strain 104) GN=cysS PE=3 SV=1
Length = 468

Score = 29.6 bits (65), Expect = 9.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1

Query: 337 VGHCMANVNGSFTRRWVMCLDGSVSLVRNVRAVTD 441
+GH + V RRW++ L V+ +RNV + D
Sbjct: 43 IGHVRSGVAFDILRRWLIALGYDVAFIRNVTDIDD 77


>sp|Q743W3|SYC1_MYCPA Cysteinyl-tRNA synthetase 1 OS=Mycobacterium
paratuberculosis GN=cysS1 PE=3 SV=1
Length = 468

Score = 29.6 bits (65), Expect = 9.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1

Query: 337 VGHCMANVNGSFTRRWVMCLDGSVSLVRNVRAVTD 441
+GH + V RRW++ L V+ +RNV + D
Sbjct: 43 IGHVRSGVAFDILRRWLIALGYDVAFIRNVTDIDD 77


tr_hit_id A4HXH6
Definition tr|A4HXH6|A4HXH6_LEIIN Putative uncharacterized protein OS=Leishmania infantum
Align length 45
Score (bit) 35.4
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913744|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_G06.
(526 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4HXH6|A4HXH6_LEIIN Putative uncharacterized protein OS=Leish... 35 1.8
tr|Q4QE92|Q4QE92_LEIMA Putative uncharacterized protein OS=Leish... 35 3.0
tr|A3UE46|A3UE46_9RHOB Putative uncharacterized protein OS=Ocean... 33 6.7
tr|A9JTY7|A9JTY7_MOUSE Small proline-rich protein 2B OS=Mus musc... 33 8.8
tr|A7PES1|A7PES1_VITVI Chromosome chr11 scaffold_13, whole genom... 33 8.8
tr|A5C6A8|A5C6A8_VITVI Putative uncharacterized protein OS=Vitis... 33 8.8

>tr|A4HXH6|A4HXH6_LEIIN Putative uncharacterized protein OS=Leishmania
infantum GN=LinJ17.1110 PE=4 SV=1
Length = 5005

Score = 35.4 bits (80), Expect = 1.8
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2

Query: 192 GKHVTPPITWNLCRPFKMANPCAIPISIKYLPYSVCSSSCDNLDM 58
G H+T PI CRPF++ +P P Y PY + S + N+++
Sbjct: 2005 GAHLTTPI----CRPFQLPHPQLFPAGQSYGPYPISSRASPNVNL 2045


>tr|Q4QE92|Q4QE92_LEIMA Putative uncharacterized protein OS=Leishmania
major GN=LmjF17.0990 PE=4 SV=1
Length = 6481

Score = 34.7 bits (78), Expect = 3.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2

Query: 192 GKHVTPPITWNLCRPFKMANPCAIPISIKYLPYSVCSSSCDNLDM 58
G H+T PI CRPF++ +P P Y PY + S + N+ +
Sbjct: 3471 GAHLTTPI----CRPFQLPHPQPFPAGQSYGPYPISSRASPNVTL 3511


>tr|A3UE46|A3UE46_9RHOB Putative uncharacterized protein
OS=Oceanicaulis alexandrii HTCC2633 GN=OA2633_05096 PE=4
SV=1
Length = 397

Score = 33.5 bits (75), Expect = 6.7
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1

Query: 184 MLSTSAWRLSRGRGSY*PCHKDVATANLGCWFLSNGVYFSCFETLF 321
M++ A+ ++ Y P H DV+ ANL WFL++ + F T+F
Sbjct: 23 MVNVQAFTMASNAYVYPPAHMDVSGANLTVWFLTHVFFEMKFITIF 68


>tr|A9JTY7|A9JTY7_MOUSE Small proline-rich protein 2B OS=Mus
musculus GN=Sprr2b PE=4 SV=1
Length = 98

Score = 33.1 bits (74), Expect = 8.8
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -2

Query: 204 PCRCGKHVTPPITWNLCRPFKMANPCAIPISIKYLPYSVCSSSC 73
P +C + PP+ C P K PC P+ + P VC C
Sbjct: 29 PPKCPEPCPPPVCCEPCPPPKCPEPCPPPVCCEPCPPPVCCEPC 72


>tr|A7PES1|A7PES1_VITVI Chromosome chr11 scaffold_13, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00016766001
PE=3 SV=1
Length = 660

Score = 33.1 bits (74), Expect = 8.8
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +2

Query: 116 MGIAHGLAILNGLQRFHVIGGVTCFPHRHGACHEDVAVINHVTKMWQLLTLVVGFFPMGF 295
+G G A++ LQ+ + G+ F + +V H TK W T+V+GF GF
Sbjct: 218 VGFMAGAAVIVSLQQLKGLLGIVHFTKKMQIIPVMSSVFGH-TKEWSWKTIVLGF---GF 273

Query: 296 ILVVLRPSS*SSKRSDIAW 352
++ +L S KR + W
Sbjct: 274 LIFLLTARLTSLKRPKLFW 292


>tr|A5C6A8|A5C6A8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018424 PE=3 SV=1
Length = 646

Score = 33.1 bits (74), Expect = 8.8
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +2

Query: 116 MGIAHGLAILNGLQRFHVIGGVTCFPHRHGACHEDVAVINHVTKMWQLLTLVVGFFPMGF 295
+G G A++ LQ+ + G+ F + +V H TK W T+V+GF GF
Sbjct: 202 VGFMAGAAVIVSLQQLKGLLGIVHFTKKMQIIPVMSSVFGH-TKEWSWKTIVLGF---GF 257

Query: 296 ILVVLRPSS*SSKRSDIAW 352
++ +L S KR + W
Sbjct: 258 LIFLLTARLTSLKRPKLFW 276