BP913748
Clone id YMU001_000033_G10
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CTGGATTTAACCCCCCATTTCGGAGCCATTCGTGCCATTAGAAATCCCATCCGAGCTACA
GACTAGGAGCTACGTTTTTCAACTCTCTTTGGTAGTTTTCTGCTGGCAGAGCTTCCATAG
CCATTACAGGTGCCATTGTTGTAGTGTCTTCCACTTACGTGAGCCCACAGCTCATTTGAG
AGTGTGTAGCCTCTTCTTGGAGTGGCCTCATACACACAGATAGAGTGGAAGTTTGGCGAC
ATTGTCTTCTTCGACTACAGGTGCAGGTACAGGTACAGGTACGGGTACAGGTTACAGGTT
ACAGGGAGTTTTGGATACAAGTTTCTTCTGTGGTTACAAAACATGTATATTTACTGTGGG
ACAGCCATGTATATGGTTGTAGTTTGAGTGGGAGCTTCTACTCTTCTGGGCAGTCTGTTT
ATGCGTGTTCTTGAGCTACAGGTTTACATCATCTATGTATGTTGATGGATGTGGACATGG
CAGTTTAACAGACACTCTTTATGCATGATA
■■Homology search results ■■ -
sp_hit_id P20766
Definition sp|P20766|LAC1_RAT Ig lambda-1 chain C region OS=Rattus norvegicus
Align length 29
Score (bit) 30.0
E-value 6.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913748|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_G10.
(510 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P20766|LAC1_RAT Ig lambda-1 chain C region OS=Rattus norvegic... 30 6.6
sp|P21128|PP11_HUMAN Placental protein 11 OS=Homo sapiens PE=1 SV=1 30 8.6
sp|P01842|LAC_HUMAN Ig lambda chain C regions OS=Homo sapiens GN... 30 8.6

>sp|P20766|LAC1_RAT Ig lambda-1 chain C region OS=Rattus norvegicus
PE=2 SV=1
Length = 104

Score = 30.0 bits (66), Expect = 6.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3

Query: 388 LKLQPYTWLSHSKYTCFVTTEETCIQNSL 302
L L W +HS Y+C VT EE ++ SL
Sbjct: 70 LLLTAKAWETHSNYSCQVTHEENTVEKSL 98


>sp|P21128|PP11_HUMAN Placental protein 11 OS=Homo sapiens PE=1 SV=1
Length = 369

Score = 29.6 bits (65), Expect = 8.6
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2

Query: 20 SEPFVPLEIPSE--LQTRSYVFQLSLVVFCWQSFHSHYRCHC 139
SEP LE +E L + Y S C+++F H++CHC
Sbjct: 24 SEPLPQLEEETEEALASNLYSAPTSCQGRCYEAFDKHHQCHC 65


>sp|P01842|LAC_HUMAN Ig lambda chain C regions OS=Homo sapiens
GN=IGLC1 PE=1 SV=1
Length = 105

Score = 29.6 bits (65), Expect = 8.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3

Query: 388 LKLQPYTWLSHSKYTCFVTTEETCIQNSL*P 296
L L P W SH Y+C VT E + ++ ++ P
Sbjct: 71 LSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP 101


tr_hit_id Q2H3V6
Definition tr|Q2H3V6|Q2H3V6_CHAGB Putative uncharacterized protein OS=Chaetomium globosum
Align length 37
Score (bit) 33.5
E-value 6.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913748|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_G10.
(510 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2H3V6|Q2H3V6_CHAGB Putative uncharacterized protein OS=Chaet... 33 6.2

>tr|Q2H3V6|Q2H3V6_CHAGB Putative uncharacterized protein
OS=Chaetomium globosum GN=CHGG_06659 PE=4 SV=1
Length = 926

Score = 33.5 bits (75), Expect = 6.2
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1

Query: 474 PHPSTYIDDVNL*LKNTHKQTAQKSRSSHSNYNHIHG 364
P PS + NL L H + SSHS Y HI G
Sbjct: 585 PQPSAHHSPTNLQLSTNHNRVIDDGDSSHSRYRHISG 621