BP913749
Clone id YMU001_000033_G11
Library
Length 494
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GATTGAAGGCTCAGCTCGCAGATGTCAAAAAGTTGGAGGAGGAGGATGTGAAGTTACAAA
CCTCCCCGTTGAAATGATTGCAGAACTTGGAGAGCTTGCGATCATGAATAATCGATCAAT
TGGGACTGTCGAAGCTGGCGAGCCAGAATATGTCAGTGCTGATTTCATAGCTTCCTTCCT
TTCACTGCCGGAAGGAGAGGAAGACATATTACAAGAAATTCAAGGTCTAGTCACTACTTC
AGACAGCAGTAAATCACAGGTCAAGCTTCTAAAAGAAGTGGACACAGGGGGCTACCTTCC
TAGAGACGGAGACTTCTTTGAGCTTGACGATCTATCTCCAGTACTTGATCTGGACAGCAA
TGGACAGGGGGAAAGTGGGAAAGACATTTGGGGTTTTGGTTCTGATAGAAACCCTTCCTC
ATCAAGGGGTGCGCTACAGGATGTGACGCTTAGGGGCCTCTCTAAAAGAGAGTNTCGTTC
GGCCAATACCAGTT
■■Homology search results ■■ -
sp_hit_id B0TZP1
Definition sp|B0TZP1|UBIE_FRAP2 Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017)
Align length 92
Score (bit) 32.3
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913749|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_G11.
(494 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|B0TZP1|UBIE_FRAP2 Ubiquinone/menaquinone biosynthesis methylt... 32 1.2
sp|Q8G5L0|GLGB_BIFLO 1,4-alpha-glucan-branching enzyme OS=Bifido... 31 2.7
sp|A4IXH9|UBIE_FRATW Ubiquinone/menaquinone biosynthesis methylt... 31 3.5
sp|Q0BNE2|UBIE_FRATO Ubiquinone/menaquinone biosynthesis methylt... 31 3.5
sp|A0Q549|UBIE_FRATN Ubiquinone/menaquinone biosynthesis methylt... 31 3.5
sp|Q2A524|UBIE_FRATH Ubiquinone/menaquinone biosynthesis methylt... 31 3.5
sp|A7NAA1|UBIE_FRATF Ubiquinone/menaquinone biosynthesis methylt... 31 3.5
sp|Q5NFE1|UBIE_FRATT Ubiquinone/menaquinone biosynthesis methylt... 30 6.0
sp|Q14GU4|UBIE_FRAT1 Ubiquinone/menaquinone biosynthesis methylt... 30 6.0
sp|Q2K967|SYS_RHIEC Seryl-tRNA synthetase OS=Rhizobium etli (str... 30 6.0
sp|Q41769|ILVB2_MAIZE Acetolactate synthase 2, chloroplastic OS=... 30 6.0

>sp|B0TZP1|UBIE_FRAP2 Ubiquinone/menaquinone biosynthesis
methyltransferase ubiE OS=Francisella philomiragia
subsp. philomiragia (strain ATCC 25017) GN=ubiE PE=3
SV=1
Length = 250

Score = 32.3 bits (72), Expect = 1.2
Identities = 25/92 (27%), Positives = 41/92 (44%)
Frame = +2

Query: 23 CQKVGGGGCEVTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEGEE 202
CQ VG G V + + E+G+ + N +G + EYV A+ A L P+
Sbjct: 81 CQMVGSQGKVVLSDINSSMLEVGKEKLTNKGCVGNI-----EYVQAN--AECLPFPDNYF 133

Query: 203 DILQEIQGLVTTSDSSKSQVKLLKEVDTGGYL 298
D + GL +D +K+ + + + GG L
Sbjct: 134 DCITISFGLRNVTDKAKALASMCRVLKPGGRL 165


>sp|Q8G5L0|GLGB_BIFLO 1,4-alpha-glucan-branching enzyme
OS=Bifidobacterium longum GN=glgB PE=3 SV=1
Length = 737

Score = 31.2 bits (69), Expect = 2.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1

Query: 73 NDCRTWRACDHE*SINWDCRSWR 141
N+ W DH+ SI+WDC +W+
Sbjct: 583 NELAQWGEWDHDASIDWDCLNWQ 605


>sp|A4IXH9|UBIE_FRATW Ubiquinone/menaquinone biosynthesis
methyltransferase ubiE OS=Francisella tularensis subsp.
tularensis (strain WY96-3418) GN=ubiE PE=3 SV=1
Length = 250

Score = 30.8 bits (68), Expect = 3.5
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +2

Query: 23 CQKVGGGGCEVTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEGEE 202
CQ VG G + + + E+G+ + N +G + EYV A+ A L P+
Sbjct: 81 CQMVGQQGKVILSDINSSMLEVGKEKLTNKGCVGNI-----EYVQAN--AECLPFPDNYF 133

Query: 203 DILQEIQGLVTTSDSSKSQVKLLKEVDTGGYL 298
D + GL +D K+ + + + GG L
Sbjct: 134 DCITISFGLRNVTDKDKALASMCRVLKPGGRL 165


>sp|Q0BNE2|UBIE_FRATO Ubiquinone/menaquinone biosynthesis
methyltransferase ubiE OS=Francisella tularensis subsp.
holarctica (strain OSU18) GN=ubiE PE=3 SV=1
Length = 250

Score = 30.8 bits (68), Expect = 3.5
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +2

Query: 23 CQKVGGGGCEVTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEGEE 202
CQ VG G + + + E+G+ + N +G + EYV A+ A L P+
Sbjct: 81 CQMVGQQGKVILSDINSSMLEVGKEKLTNKGCVGNI-----EYVQAN--AECLPFPDNYF 133

Query: 203 DILQEIQGLVTTSDSSKSQVKLLKEVDTGGYL 298
D + GL +D K+ + + + GG L
Sbjct: 134 DCITISFGLRNVTDKDKALASMCRVLKPGGRL 165


>sp|A0Q549|UBIE_FRATN Ubiquinone/menaquinone biosynthesis
methyltransferase ubiE OS=Francisella tularensis subsp.
novicida (strain U112) GN=ubiE PE=3 SV=1
Length = 250

Score = 30.8 bits (68), Expect = 3.5
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +2

Query: 23 CQKVGGGGCEVTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEGEE 202
CQ VG G + + + E+G+ + N +G + EYV A+ A L P+
Sbjct: 81 CQMVGQQGKVILSDINSSMLEVGKEKLTNKGCVGNI-----EYVQAN--AECLPFPDNYF 133

Query: 203 DILQEIQGLVTTSDSSKSQVKLLKEVDTGGYL 298
D + GL +D K+ + + + GG L
Sbjct: 134 DCITISFGLRNVTDKEKALASMCRVLKPGGRL 165


>sp|Q2A524|UBIE_FRATH Ubiquinone/menaquinone biosynthesis
methyltransferase ubiE OS=Francisella tularensis subsp.
holarctica (strain LVS) GN=ubiE PE=3 SV=1
Length = 250

Score = 30.8 bits (68), Expect = 3.5
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +2

Query: 23 CQKVGGGGCEVTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEGEE 202
CQ VG G + + + E+G+ + N +G + EYV A+ A L P+
Sbjct: 81 CQMVGQQGKVILSDINSSMLEVGKEKLTNKGCVGNI-----EYVQAN--AECLPFPDNYF 133

Query: 203 DILQEIQGLVTTSDSSKSQVKLLKEVDTGGYL 298
D + GL +D K+ + + + GG L
Sbjct: 134 DCITISFGLRNVTDKDKALASMCRVLKPGGRL 165


>sp|A7NAA1|UBIE_FRATF Ubiquinone/menaquinone biosynthesis
methyltransferase ubiE OS=Francisella tularensis subsp.
holarctica (strain FTA) GN=ubiE PE=3 SV=1
Length = 250

Score = 30.8 bits (68), Expect = 3.5
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +2

Query: 23 CQKVGGGGCEVTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEGEE 202
CQ VG G + + + E+G+ + N +G + EYV A+ A L P+
Sbjct: 81 CQMVGQQGKVILSDINSSMLEVGKEKLTNKGCVGNI-----EYVQAN--AECLPFPDNYF 133

Query: 203 DILQEIQGLVTTSDSSKSQVKLLKEVDTGGYL 298
D + GL +D K+ + + + GG L
Sbjct: 134 DCITISFGLRNVTDKDKALASMCRVLKPGGRL 165


>sp|Q5NFE1|UBIE_FRATT Ubiquinone/menaquinone biosynthesis
methyltransferase ubiE OS=Francisella tularensis subsp.
tularensis GN=ubiE PE=3 SV=1
Length = 250

Score = 30.0 bits (66), Expect = 6.0
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +2

Query: 23 CQKVGGGGCEVTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEGEE 202
CQ VG G + + + E+G+ + N +G + EYV A+ A L P+
Sbjct: 81 CQMVGQQGKVILSDINSSMLEVGKEKLTNKGCVGNI-----EYVQAN--AECLPFPDNYF 133

Query: 203 DILQEIQGLVTTSDSSKSQVKLLKEVDTGG 292
D + GL +D K+ + + + GG
Sbjct: 134 DCITISFGLRNVTDKDKALASMCRVLKPGG 163


>sp|Q14GU4|UBIE_FRAT1 Ubiquinone/menaquinone biosynthesis
methyltransferase ubiE OS=Francisella tularensis subsp.
tularensis (strain FSC 198) GN=ubiE PE=3 SV=1
Length = 250

Score = 30.0 bits (66), Expect = 6.0
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +2

Query: 23 CQKVGGGGCEVTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEGEE 202
CQ VG G + + + E+G+ + N +G + EYV A+ A L P+
Sbjct: 81 CQMVGQQGKVILSDINSSMLEVGKEKLTNKGCVGNI-----EYVQAN--AECLPFPDNYF 133

Query: 203 DILQEIQGLVTTSDSSKSQVKLLKEVDTGG 292
D + GL +D K+ + + + GG
Sbjct: 134 DCITISFGLRNVTDKDKALASMCRVLKPGG 163


>sp|Q2K967|SYS_RHIEC Seryl-tRNA synthetase OS=Rhizobium etli (strain
CFN 42 / ATCC 51251) GN=serS PE=3 SV=1
Length = 427

Score = 30.0 bits (66), Expect = 6.0
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Frame = +2

Query: 20 RCQKVGGGGCEVTNLPVEMIAE-LGELAI-MNNRSIGTVEAGEPEYVSADFIASFLSLPE 193
R K+ G V P+ + LG+ I ++ R G E P V A+ + SLP+
Sbjct: 155 RAAKLSGSRFTVLTGPLARLERALGQFMIDLHTREHGYTEVSSPLMVRAEAVFGTGSLPK 214

Query: 194 GEEDILQEIQGLVTTSDSSKSQVKLLKE 277
EED+ + G + + L++E
Sbjct: 215 FEEDLFKTTDGRYLIPTAEVTLTNLVRE 242


tr_hit_id B0C6Q7
Definition tr|B0C6Q7|B0C6Q7_ACAM1 Methyltransferase, putative OS=Acaryochloris marina (strain MBIC 11017)
Align length 95
Score (bit) 40.0
E-value 0.06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913749|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_G11.
(494 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0C6Q7|B0C6Q7_ACAM1 Methyltransferase, putative OS=Acaryochlo... 40 0.060
tr|Q054X6|Q054X6_LEPBL UDP-N-acetylglucosamine diphosphorylase O... 36 0.86
tr|Q04Q07|Q04Q07_LEPBJ UDP-N-acetylglucosamine diphosphorylase O... 36 0.86
tr|A6DD90|A6DD90_9PROT Putative uncharacterized protein OS=Camin... 34 4.3
tr|A3WHY1|A3WHY1_9SPHN Putative uncharacterized protein OS=Eryth... 34 4.3
tr|Q0BWX3|Q0BWX3_HYPNA Chemotaxis MotA protein OS=Hyphomonas nep... 33 7.3
tr|Q82GN1|Q82GN1_STRAW Putative acetyl/propionyl CoA carboxylase... 33 9.5

>tr|B0C6Q7|B0C6Q7_ACAM1 Methyltransferase, putative OS=Acaryochloris
marina (strain MBIC 11017) GN=AM1_2606 PE=4 SV=1
Length = 263

Score = 40.0 bits (92), Expect = 0.060
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +2

Query: 20 RCQKVGGGGCEVTNLPVEMIAELGELAI--MNNRSIGTVEAGEPEYVSADFIASFLSLPE 193
RC +VG G +T M+ E G++ ++ R + +EAG E V D L L +
Sbjct: 45 RCLEVGAGAGSITQWMAGMVGEKGQVVAVDLDTRFVANLEAGNVEVVEGDI--QHLPLDK 102

Query: 194 GEEDILQEIQGLVTTSDSSKSQVKLLKEVDTGGYL 298
D++ L+ D+ KLL+ V GG++
Sbjct: 103 QSFDLVHARYVLIHNPDAHAFLSKLLELVKPGGWI 137


>tr|Q054X6|Q054X6_LEPBL UDP-N-acetylglucosamine diphosphorylase
OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain L550) GN=glmU PE=4 SV=1
Length = 252

Score = 36.2 bits (82), Expect = 0.86
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +2

Query: 50 EVTNLPVEMIAELGELAIMNNRSIGTV--EAGEPEYVSADFIASFLSLPEGEEDILQEIQ 223
E+ N +I G++ ++ +++ + E E E+ SA +++ + P G I++
Sbjct: 94 ELKNFQGSVIVACGDVPMITSKTFADIVKEHRENEF-SATILSAVVEKPTGYGRIIRNAS 152

Query: 224 GLVTT---SDSSKSQVKLLKEVDTGGYLPRDGDFFE 322
G VT S S+ KL+ E++TG Y+ D F+
Sbjct: 153 GDVTAIVEEKDSSSEEKLINEINTGTYVFEGEDLFD 188


>tr|Q04Q07|Q04Q07_LEPBJ UDP-N-acetylglucosamine diphosphorylase
OS=Leptospira borgpetersenii serovar Hardjo-bovis
(strain JB197) GN=glmU PE=4 SV=1
Length = 252

Score = 36.2 bits (82), Expect = 0.86
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +2

Query: 50 EVTNLPVEMIAELGELAIMNNRSIGTV--EAGEPEYVSADFIASFLSLPEGEEDILQEIQ 223
E+ N +I G++ ++ +++ + E E E+ SA +++ + P G I++
Sbjct: 94 ELKNFQGSVIVACGDVPMITSKTFADIVKEHRENEF-SATILSAVVEKPTGYGRIIRNAS 152

Query: 224 GLVTT---SDSSKSQVKLLKEVDTGGYLPRDGDFFE 322
G VT S S+ KL+ E++TG Y+ D F+
Sbjct: 153 GDVTAIVEEKDSSSEEKLINEINTGTYVFEGEDLFD 188


>tr|A6DD90|A6DD90_9PROT Putative uncharacterized protein
OS=Caminibacter mediatlanticus TB-2 GN=CMTB2_08272 PE=4
SV=1
Length = 267

Score = 33.9 bits (76), Expect = 4.3
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +2

Query: 113 RSIGTVEAGEPEYVSADFIASFLSLPEGEEDILQEIQGLVTTSDSSKSQVKLL------K 274
++I ++E G V A+F + L + + EI+ L+ D++KS++ L K
Sbjct: 161 KTIKSIEVGVKNGVIAEF--KLIRLKDSLNSLDIEIENLLINIDNTKSEIYKLTKVYLNK 218

Query: 275 EVDTGGYLPRDGDFF 319
E++ +LP+ DFF
Sbjct: 219 EIEINSFLPKKRDFF 233


>tr|A3WHY1|A3WHY1_9SPHN Putative uncharacterized protein
OS=Erythrobacter sp. NAP1 GN=NAP1_09202 PE=4 SV=1
Length = 150

Score = 33.9 bits (76), Expect = 4.3
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +2

Query: 53 VTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEGEEDILQEIQGLV 232
+ L E+ A G+ A++ N I + GE E A F A+ S E L+ + G
Sbjct: 61 IAALEAELEAHPGDPALLINLGIAHAQIGETEKARASFEAAMRSR---EVLDLETVNG-- 115

Query: 233 TTSDSSKSQVKLLKEVDTGGYLP 301
TT+DS + K + +D G +LP
Sbjct: 116 TTTDSRRLARKAIAMLDRGEFLP 138


>tr|Q0BWX3|Q0BWX3_HYPNA Chemotaxis MotA protein OS=Hyphomonas
neptunium (strain ATCC 15444) GN=HNE_3347 PE=4 SV=1
Length = 291

Score = 33.1 bits (74), Expect = 7.3
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2

Query: 38 GGGCEVTNLPVEMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSLPEG 196
GGG +T P M A ELA++ +IGTV G V+ + +A F+ +G
Sbjct: 15 GGGLALTGGPAAMHALPFELALIGGAAIGTVMLGNSPAVAREALAGFVRAFQG 67


>tr|Q82GN1|Q82GN1_STRAW Putative acetyl/propionyl CoA carboxylase
alpha subunit OS=Streptomyces avermitilis GN=accA2 PE=4
SV=1
Length = 616

Score = 32.7 bits (73), Expect = 9.5
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2

Query: 71 EMIAELGELAIMNNRSIGTVEAGEPEYVSADFIASFLSL 187
E+ AEL ELAI R++G AG E++ AD A FL +
Sbjct: 233 ELTAELHELAIRAARAVGYTGAGTVEFLVADGRAHFLEM 271