BP913755
Clone id YMU001_000033_H06
Library
Length 435
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTGCGATCAGACACTTTTATGAGCCCAGACAAAGGGGTGGCTATTCAATACTTTGGTAGC
TTTCGAGGCGTCTAGATAGCTGGCTGAAGCAGGAGACAGAGGATCATGGTATGCACAGGT
GACTTAGTGGCTCACATATCATGGACTAGAAATGGATGTCCCCACCACCATTTCAGTATA
ACCGGGTTGCCTTGCATATTCACCTCCAGCACGATGAGAGGAACAGAGTACTAAGACAGG
ACCTTGGCAGCTCTATACACTCTCAGCCATTCAATCTCTACCACGAAAGAGCTAAACTTT
ACAGAGATTACTTCATGAGCATATGGATTTATGCAGACCCACATAAATGGATTTCTATAA
CATGCCGCTAGGGTGGCAGGTGGTCAGATCAGAGTATATTCACACCTCTTGAGATAGAGG
TGGGTAAGGCAGCTC
■■Homology search results ■■ -
sp_hit_id O15050
Definition sp|O15050|LBA1_HUMAN Lupus brain antigen 1 homolog OS=Homo sapiens
Align length 47
Score (bit) 31.6
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913755|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_H06.
(435 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O15050|LBA1_HUMAN Lupus brain antigen 1 homolog OS=Homo sapie... 32 1.5
sp|Q8N5A5|ZGPAT_HUMAN Zinc finger CCCH-type with G patch domain-... 30 4.4

>sp|O15050|LBA1_HUMAN Lupus brain antigen 1 homolog OS=Homo sapiens
GN=LBA1 PE=2 SV=4
Length = 2925

Score = 31.6 bits (70), Expect = 1.5
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3

Query: 195 HIHLQHDERNRVLRQDLGSSIHSQPFNLYHERAKLYRDYFMSIWIYA 335
HIHL+H +R +V Q H + E + +D S+WI++
Sbjct: 2777 HIHLEHHQRQQVAYQKYSEFFHEKVDPAIDEGKLVVQDIEQSVWIHS 2823


>sp|Q8N5A5|ZGPAT_HUMAN Zinc finger CCCH-type with G patch
domain-containing protein OS=Homo sapiens GN=ZGPAT PE=1
SV=3
Length = 531

Score = 30.0 bits (66), Expect = 4.4
Identities = 21/67 (31%), Positives = 32/67 (47%)
Frame = -1

Query: 210 AGGEYARQPGYTEMVVGTSISSP*YVSH*VTCAYHDPLSPASASYLDASKATKVLNSHPF 31
AGG+ + E + GT +S+P Y S T YH+ + + D S +VL +P
Sbjct: 115 AGGQEEEEGEDEEELSGTKVSAP-YYSSWGTLEYHNAMVVGTEEAEDGSAGVRVLYLYP- 172

Query: 30 VWAHKSV 10
HKS+
Sbjct: 173 --THKSL 177


tr_hit_id Q1DVV6
Definition tr|Q1DVV6|Q1DVV6_COCIM Putative uncharacterized protein OS=Coccidioides immitis
Align length 45
Score (bit) 33.9
E-value 4.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913755|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_H06.
(435 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1DVV6|Q1DVV6_COCIM Putative uncharacterized protein OS=Cocci... 34 4.1
tr|A2XCX2|A2XCX2_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.1
tr|Q57X42|Q57X42_9TRYP Putative uncharacterized protein OS=Trypa... 33 7.1

>tr|Q1DVV6|Q1DVV6_COCIM Putative uncharacterized protein
OS=Coccidioides immitis GN=CIMG_05557 PE=4 SV=1
Length = 405

Score = 33.9 bits (76), Expect = 4.1
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 7/45 (15%)
Frame = +1

Query: 109 VCTGDLVAHISWTRNGCPHHHF-------SITGLPCIFTSSTMRG 222
V T DL AH++W RN HHH ++TGL F S RG
Sbjct: 44 VATSDLEAHVTWVRN---HHHSGHVRRNGTLTGLKTTFDISGFRG 85


>tr|A2XCX2|A2XCX2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10157 PE=4 SV=1
Length = 321

Score = 33.1 bits (74), Expect = 7.1
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -1

Query: 231 VLCSSHRAGGEYARQPGYTEMVVGTSISSP 142
VLCSS A GE A+ PGY +VGTS S P
Sbjct: 283 VLCSSWAAAGECAKNPGY---MVGTSDSPP 309


>tr|Q57X42|Q57X42_9TRYP Putative uncharacterized protein
OS=Trypanosoma brucei GN=Tb927.5.4640 PE=4 SV=1
Length = 228

Score = 33.1 bits (74), Expect = 7.1
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3

Query: 108 GMHR*LSGSHIMD*KWMSPPPFQ-YNRVALHIHLQHDERNRVLRQDLGSSIH 260
GMHR H SPPP + +N H+H RN+ R GSSIH
Sbjct: 133 GMHR----QHPFSVAKESPPPLRSFNVKGFHLHFTFVNRNKTSRSTSGSSIH 180