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NBDC - LSDB Archive
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BP913756
Clone id YMU001_000033_H07
Library
Length 443
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000033_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGAAACAGCCTCAAATCTAGTATGGGATGGTTCAAAGTTACAAATTATTCACTTTGAAGG
TAGTCAACACATTACATTGCCACAAATGAAGTCTCTTTTTCACATATACCGCAGCAGCTC
CACATGATACCTCCCTTTCCTCGTAGTACCAATTTGCCCAAACTCTACCCTGCCTTTTTG
GTTTACTGAAATTATGTCTCCAGATTTGACTAAAAGTCCATTCTTGGTAACCTCTTTCCA
ATTAACACGAACATCTCCTGCACTGATCAAATCAGCTAGCTTTGAACGTGAAATTTTGAA
ACCAGCACTTGCCACTGCATCGACCCTAAGAGAGGCTTCAACAGACTTGGTGATTTGTAA
TCTAGGAGGTTGATAATGAATATCCTTCAACGGAATCGTTTGGCAAAGCACTGGTGTCTT
GCGAACCTGTGTGAGGGAGGTCT
■■Homology search results ■■ -
sp_hit_id P71020
Definition sp|P71020|YLMH_BACSU Putative RNA-binding protein ylmH OS=Bacillus subtilis
Align length 110
Score (bit) 62.0
E-value 1.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913756|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_H07.
         (443 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P71020|YLMH_BACSU Putative RNA-binding protein ylmH OS=Bacill...    62   1e-09
sp|P75485|Y292_MYCPN Uncharacterized RNA pseudouridine synthase ...    44   4e-04
sp|Q8R7Y1|RS4_THETN 30S ribosomal protein S4 OS=Thermoanaerobact...    42   9e-04
sp|P47451|Y209_MYCGE Uncharacterized RNA pseudouridine synthase ...    38   0.022
sp|P35159|RLUB_BACSU Ribosomal large subunit pseudouridine synth...    36   0.082
sp|Q6AP44|RS4_DESPS 30S ribosomal protein S4 OS=Desulfotalea psy...    35   0.11 
sp|A0PXX4|RS4A_CLONN 30S ribosomal protein S4 A OS=Clostridium n...    35   0.11 
sp|Q9ZL98|Y745_HELPJ Uncharacterized RNA pseudouridine synthase ...    35   0.14 
sp|Q3B6D7|RS4_PELLD 30S ribosomal protein S4 OS=Pelodictyon lute...    34   0.24 
sp|A3DJK0|RS4_CLOTH 30S ribosomal protein S4 OS=Clostridium ther...    34   0.24 
sp|Q30Z67|RS4_DESDG 30S ribosomal protein S4 OS=Desulfovibrio de...    34   0.31 
sp|Q47J78|RS4_DECAR 30S ribosomal protein S4 OS=Dechloromonas ar...    34   0.31 
sp|O25441|Y745_HELPY Uncharacterized RNA pseudouridine synthase ...    33   0.41 
sp|P75122|SYY_MYCPN Tyrosyl-tRNA synthetase OS=Mycoplasma pneumo...    33   0.41 
sp|Q7UXM6|RS4_RHOBA 30S ribosomal protein S4 OS=Rhodopirellula b...    33   0.41 
sp|O51560|RS4_BORBU 30S ribosomal protein S4 OS=Borrelia burgdor...    33   0.41 
sp|Q06803|HLYA_TREHY Hemolysin A OS=Treponema hyodysenteriae GN=...    33   0.41 
sp|A1WK93|RS4_VEREI 30S ribosomal protein S4 OS=Verminephrobacte...    33   0.53 
sp|A2SLD2|RS4_METPP 30S ribosomal protein S4 OS=Methylibium petr...    33   0.53 
sp|Q660Q7|RS4_BORGA 30S ribosomal protein S4 OS=Borrelia garinii...    33   0.53 
sp|A1BJ08|RS4_CHLPD 30S ribosomal protein S4 OS=Chlorobium phaeo...    33   0.69 
sp|A1W332|RS4_ACISJ 30S ribosomal protein S4 OS=Acidovorax sp. (...    33   0.69 
sp|A1TJU1|RS4_ACIAC 30S ribosomal protein S4 OS=Acidovorax avena...    33   0.69 
sp|A8F4T8|RS4_THELT 30S ribosomal protein S4 OS=Thermotoga letti...    32   0.90 
sp|A4SCT5|RS4_PROVI 30S ribosomal protein S4 OS=Prosthecochloris...    32   0.90 
sp|Q4FLJ0|RS4_PELUB 30S ribosomal protein S4 OS=Pelagibacter ubi...    32   0.90 
sp|Q12G78|RS4_POLSJ 30S ribosomal protein S4 OS=Polaromonas sp. ...    32   1.2  
sp|A1VJ39|RS4_POLNA 30S ribosomal protein S4 OS=Polaromonas naph...    32   1.2  
sp|A4XLQ3|RS4_CALS8 30S ribosomal protein S4 OS=Caldicellulosiru...    32   1.2  
sp|P0A4C5|RS4_BORPE 30S ribosomal protein S4 OS=Bordetella pertu...    32   1.2  

>sp|P71020|YLMH_BACSU Putative RNA-binding protein ylmH OS=Bacillus
           subtilis GN=ylmH PE=4 SV=1
          Length = 257

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
 Frame = -3

Query: 435 LTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLISAG 256
           LTQ  K  V  + I L D++     ++I     +SLR+DAV ++  + SR K   L+  G
Sbjct: 146 LTQAGKAAVSLEKIDLSDLNIPAVDVEIRDDTVSSLRLDAVCASMSRQSRQKSQTLVKNG 205

Query: 255 DVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQI-GTTRKGRYHVELLR 109
            V+VNWK V     +V  GD++S+   GR    +I G T+K ++ V   R
Sbjct: 206 LVKVNWKVVEDPSYIVAEGDMLSIRGFGRCSLTKIEGKTKKDKWRVTFER 255


>sp|P75485|Y292_MYCPN Uncharacterized RNA pseudouridine synthase
           MG209 homolog OS=Mycoplasma pneumoniae GN=MPN_292 PE=3
           SV=1
          Length = 309

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 25/60 (41%), Positives = 36/60 (60%)
 Frame = -3

Query: 360 LQITKSVEASLRVDAVASAGFKISRSKLADLISAGDVRVNWKEVTKNGLLVKSGDIISVN 181
           ++ T SV  + R+D   +    +SR K+A LI  G V VN K++TKNG LV+  D + VN
Sbjct: 1   MEQTFSVTTAQRLDTFLATLLNLSRVKVAKLIVDGLVSVNGKKITKNGWLVQPEDRVHVN 60


>sp|Q8R7Y1|RS4_THETN 30S ribosomal protein S4 OS=Thermoanaerobacter
           tengcongensis GN=rpsD PE=3 SV=1
          Length = 206

 Score = 42.4 bits (98), Expect = 9e-04
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = -3

Query: 321 DAVASAGFKISRSKLADLISAGDVRVNWKEVTKNGLLVKSGDIISVNQKGR 169
           + V   GF +SR++   L+S G + VN K+V     LVK GD+ISV +  R
Sbjct: 102 NVVYRLGFAVSRAQARQLVSHGHIEVNGKKVDIPSYLVKPGDVISVKESSR 152


>sp|P47451|Y209_MYCGE Uncharacterized RNA pseudouridine synthase
           MG209 OS=Mycoplasma genitalium GN=MG209 PE=3 SV=1
          Length = 308

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 19/53 (35%), Positives = 31/53 (58%)
 Frame = -3

Query: 342 VEASLRVDAVASAGFKISRSKLADLISAGDVRVNWKEVTKNGLLVKSGDIISV 184
           V  + R+D++ ++   +SR K+  LI  G ++VN K   KN L+V   D+I V
Sbjct: 7   VTTTKRLDSLLASLLNLSRVKVVKLIMNGQIKVNEKLTFKNSLIVAKDDVIKV 59


>sp|P35159|RLUB_BACSU Ribosomal large subunit pseudouridine synthase
           B OS=Bacillus subtilis GN=rluB PE=1 SV=1
          Length = 229

 Score = 35.8 bits (81), Expect = 0.082
 Identities = 22/45 (48%), Positives = 27/45 (60%)
 Frame = -3

Query: 315 VASAGFKISRSKLADLISAGDVRVNWKEVTKNGLLVKSGDIISVN 181
           +A AG   SRSK  +LI  G V+VN K VT+ G+ V   D I VN
Sbjct: 8   IAHAGVA-SRSKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVN 51


>sp|Q6AP44|RS4_DESPS 30S ribosomal protein S4 OS=Desulfotalea
           psychrophila GN=rpsD PE=3 SV=1
          Length = 210

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = -3

Query: 321 DAVASAGFKISRSKLADLISAGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQI 151
           +AV  AGF  SR++   ++    + +N K V      V  GD+IS+ +K R   G +
Sbjct: 103 NAVFRAGFASSRTQARQIVRHKHILINGKRVDIPSYQVSEGDVISLREKSRANAGVV 159


>sp|A0PXX4|RS4A_CLONN 30S ribosomal protein S4 A OS=Clostridium
           novyi (strain NT) GN=rpsD1 PE=3 SV=1
          Length = 206

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -3

Query: 330 LRVDAVA-SAGFKISRSKLADLISAGDVRVNWKEVTKNGLLVKSGDIISVNQKGR 169
           +R+D V    GF  SR++   L++ G   VN K+V      V +GD+ISV +K R
Sbjct: 98  MRLDNVVYKLGFGSSRAEARQLVTHGHFLVNGKKVDIISYQVSAGDVISVREKSR 152


>sp|Q9ZL98|Y745_HELPJ Uncharacterized RNA pseudouridine synthase
           jhp_0682 OS=Helicobacter pylori J99 GN=jhp_0682 PE=3
           SV=1
          Length = 327

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 18/48 (37%), Positives = 29/48 (60%)
 Frame = -3

Query: 327 RVDAVASAGFKISRSKLADLISAGDVRVNWKEVTKNGLLVKSGDIISV 184
           R+D   +   +IS++++ +LI  G V    KEV K GL +K GD I++
Sbjct: 13  RIDEFLAKELQISKNQVLNLIKEGLVFCQKKEVKKGGLALKEGDAITL 60


>sp|Q3B6D7|RS4_PELLD 30S ribosomal protein S4 OS=Pelodictyon
           luteolum (strain DSM 273) GN=rpsD PE=3 SV=1
          Length = 203

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 22/62 (35%), Positives = 31/62 (50%)
 Frame = -3

Query: 354 ITKSVEASLRVDAVASAGFKISRSKLADLISAGDVRVNWKEVTKNGLLVKSGDIISVNQK 175
           + K +E  L  + V  AGF  SR+    L+S   + VN ++V     LV  GD+I   QK
Sbjct: 87  LVKLIERRLD-NVVFRAGFAPSRAGARQLVSHSHLLVNGRKVNIPSFLVSPGDLIEFRQK 145

Query: 174 GR 169
            R
Sbjct: 146 SR 147


>sp|A3DJK0|RS4_CLOTH 30S ribosomal protein S4 OS=Clostridium
           thermocellum (strain ATCC 27405 / DSM 1237) GN=rpsD PE=3
           SV=1
          Length = 208

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -3

Query: 321 DAVASAGFKISRSKLADLISAGDVRVNWKEVTKNGLLVKSGDIISVNQKGR 169
           + V   G  +SR +   L+  G   VN K V     LVK GD+I+V +K +
Sbjct: 102 NVVYRMGLAVSRREARQLVRHGHFTVNGKRVDIPSYLVKVGDVIAVKEKSK 152
tr_hit_id A9NS86
Definition tr|A9NS86|A9NS86_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 113
Score (bit) 154.0
E-value 2.0e-36
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913756|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_H07.
         (443 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NS86|A9NS86_PICSI Putative uncharacterized protein OS=Picea...   154   2e-36
tr|Q93YQ0|Q93YQ0_ARATH Putative uncharacterized protein F10L8.3 ...   139   5e-32
tr|B7FL87|B7FL87_MEDTR Putative uncharacterized protein OS=Medic...   139   9e-32
tr|B4F7Y6|B4F7Y6_MAIZE Putative uncharacterized protein OS=Zea m...   139   9e-32
tr|Q5JNI6|Q5JNI6_ORYSJ S4 domain protein-like OS=Oryza sativa su...   138   2e-31
tr|Q0JJC9|Q0JJC9_ORYSJ Os01g0747700 protein (Fragment) OS=Oryza ...   138   2e-31
tr|B8A9E7|B8A9E7_ORYSI Putative uncharacterized protein OS=Oryza...   138   2e-31
tr|B6TPG8|B6TPG8_MAIZE RNA-binding S4 OS=Zea mays PE=2 SV=1           135   8e-31
tr|A9S0V3|A9S0V3_PHYPA Predicted protein (Fragment) OS=Physcomit...   135   1e-30
tr|A5B7P7|A5B7P7_VITVI Putative uncharacterized protein OS=Vitis...   132   1e-29
tr|B7KD11|B7KD11_9CHRO Photosystem II S4 domain protein OS=Cyano...   127   3e-28
tr|A7P1P0|A7P1P0_VITVI Chromosome chr19 scaffold_4, whole genome...   127   4e-28
tr|B2IVN0|B2IVN0_NOSP7 RNA-binding S4 domain protein OS=Nostoc p...   125   1e-27
tr|B7JUZ3|B7JUZ3_SYNP8 Photosystem II S4 domain protein OS=Synec...   125   1e-27
tr|B4BY97|B4BY97_9CHRO Photosystem II S4 domain protein OS=Cyano...   125   1e-27
tr|A3IGZ9|A3IGZ9_9CHRO RNA-binding S4 OS=Cyanothece sp. CCY 0110...   125   1e-27
tr|Q9LNN6|Q9LNN6_ARATH F8L10.3 protein OS=Arabidopsis thaliana G...   125   1e-27
tr|B4AYM3|B4AYM3_9CHRO Photosystem II S4 domain protein OS=Cyano...   124   2e-27
tr|Q4C0K5|Q4C0K5_CROWT RNA-binding S4 OS=Crocosphaera watsonii G...   124   2e-27
tr|Q3MEF0|Q3MEF0_ANAVT RNA-binding S4 OS=Anabaena variabilis (st...   124   3e-27
tr|Q8YT36|Q8YT36_ANASP Alr2890 protein OS=Anabaena sp. (strain P...   122   9e-27
tr|B1WVU9|B1WVU9_CYAA5 Putative RNA-binding S4 protein OS=Cyanot...   122   9e-27
tr|B5W1F2|B5W1F2_SPIMA Photosystem II S4 domain protein OS=Arthr...   122   1e-26
tr|B0JHA5|B0JHA5_MICAN RNA-binding S4 OS=Microcystis aeruginosa ...   121   1e-26
tr|A8IJH5|A8IJH5_CHLRE Predicted protein OS=Chlamydomonas reinha...   120   3e-26
tr|A0ZM87|A0ZM87_NODSP Putative uncharacterized protein OS=Nodul...   120   3e-26
tr|A0YWE2|A0YWE2_9CYAN RNA-binding S4 OS=Lyngbya sp. PCC 8106 GN...   120   4e-26
tr|B1XMP5|B1XMP5_SYNP2 S4 domain protein OS=Synechococcus sp. (s...   119   6e-26
tr|B8HWA0|B8HWA0_9CHRO Photosystem II S4 domain protein OS=Cyano...   119   1e-25
tr|A8YHU1|A8YHU1_MICAE Similar to tr|Q8YT36|Q8YT36 OS=Microcysti...   119   1e-25

>tr|A9NS86|A9NS86_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 332

 Score =  154 bits (390), Expect = 2e-36
 Identities = 74/113 (65%), Positives = 93/113 (82%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           +SLTQV   PV C  IPL  + +QPPR ++ KSVEASLRVDA+ASAGF++SRSKL +LIS
Sbjct: 220 SSLTQVHNVPVSCSPIPLLALEFQPPRTKVLKSVEASLRVDAIASAGFQMSRSKLVNLIS 279

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
            GDVRVNW EVTKNG L+K+GDIIS+  KGRV+ G+I TTRKG++ V+L+RY+
Sbjct: 280 GGDVRVNWSEVTKNGTLLKTGDIISIKGKGRVQLGEIKTTRKGKFAVDLIRYL 332


>tr|Q93YQ0|Q93YQ0_ARATH Putative uncharacterized protein F10L8.3
           (At1g53120) (Putative uncharacterized protein) (Putative
           uncharacterized protein At1g53120) OS=Arabidopsis
           thaliana GN=At1g53120 PE=2 SV=1
          Length = 320

 Score =  139 bits (351), Expect = 5e-32
 Identities = 67/113 (59%), Positives = 88/113 (77%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           T+L +V    V C  IPL  + Y+PPR    K+VEASLR+DAVASAGFKISRSKL DLIS
Sbjct: 208 TALDKVGNVGVTCSKIPLLALEYEPPRTNSFKTVEASLRIDAVASAGFKISRSKLVDLIS 267

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
           + DVRVNW  VTKNG +VK+GD++SV+ KGR++ G+I  T+KG++ VE++RY+
Sbjct: 268 SKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIRYL 320


>tr|B7FL87|B7FL87_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 325

 Score =  139 bits (349), Expect = 9e-32
 Identities = 65/113 (57%), Positives = 88/113 (77%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           ++L +VR  PV C  IPL  + Y+PPR +  K++EASLRVDAVASAGFKISRSKL D+IS
Sbjct: 213 SALDKVRNVPVTCTKIPLISLDYEPPRTKSFKTIEASLRVDAVASAGFKISRSKLVDMIS 272

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
            GDVR+NW  +T  G  VKSGD++SV+  GR++ G++ TT+KG++ VEL+RY+
Sbjct: 273 NGDVRINWIPITTKGTTVKSGDLVSVSGLGRLKIGEVNTTKKGKFAVELIRYL 325


>tr|B4F7Y6|B4F7Y6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 304

 Score =  139 bits (349), Expect = 9e-32
 Identities = 68/113 (60%), Positives = 89/113 (78%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           ++L +V K  V C  IPL  + Y+PPR    K+VE+SLRVDA+ASAGFKISR+KLA LIS
Sbjct: 192 STLEKVGKVGVSCTQIPLLALEYEPPRTNSFKTVESSLRVDALASAGFKISRTKLASLIS 251

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
           +GDVRVNW   TKNG+ +KSGD++SV+  GR++ G+I TTRKG+Y VEL+RY+
Sbjct: 252 SGDVRVNWTPTTKNGVTLKSGDVVSVSGMGRLKIGEIVTTRKGKYAVELIRYL 304


>tr|Q5JNI6|Q5JNI6_ORYSJ S4 domain protein-like OS=Oryza sativa
           subsp. japonica GN=P0481E12.15 PE=4 SV=1
          Length = 305

 Score =  138 bits (347), Expect = 2e-31
 Identities = 67/113 (59%), Positives = 90/113 (79%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           ++L +V K  V C  IPL  + Y+PPR +  K+VE+SLRVDA+ SAGFKISR+KLA LIS
Sbjct: 193 STLEKVGKVGVSCTQIPLLALEYEPPRTKSFKTVESSLRVDALGSAGFKISRTKLASLIS 252

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
           AGDVRVNW  V+KNG+ +K+GD++SV+  GR++ G+I TTRKG+Y VEL+RY+
Sbjct: 253 AGDVRVNWSPVSKNGVTLKAGDVVSVSGMGRLKIGEIVTTRKGKYAVELIRYL 305


>tr|Q0JJC9|Q0JJC9_ORYSJ Os01g0747700 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os01g0747700 PE=4 SV=1
          Length = 328

 Score =  138 bits (347), Expect = 2e-31
 Identities = 67/113 (59%), Positives = 90/113 (79%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           ++L +V K  V C  IPL  + Y+PPR +  K+VE+SLRVDA+ SAGFKISR+KLA LIS
Sbjct: 216 STLEKVGKVGVSCTQIPLLALEYEPPRTKSFKTVESSLRVDALGSAGFKISRTKLASLIS 275

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
           AGDVRVNW  V+KNG+ +K+GD++SV+  GR++ G+I TTRKG+Y VEL+RY+
Sbjct: 276 AGDVRVNWSPVSKNGVTLKAGDVVSVSGMGRLKIGEIVTTRKGKYAVELIRYL 328


>tr|B8A9E7|B8A9E7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03722 PE=4 SV=1
          Length = 305

 Score =  138 bits (347), Expect = 2e-31
 Identities = 67/113 (59%), Positives = 90/113 (79%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           ++L +V K  V C  IPL  + Y+PPR +  K+VE+SLRVDA+ SAGFKISR+KLA LIS
Sbjct: 193 STLEKVGKVGVSCTQIPLLALEYEPPRTKSFKTVESSLRVDALGSAGFKISRTKLASLIS 252

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
           AGDVRVNW  V+KNG+ +K+GD++SV+  GR++ G+I TTRKG+Y VEL+RY+
Sbjct: 253 AGDVRVNWSPVSKNGVTLKAGDVVSVSGMGRLKIGEIVTTRKGKYAVELIRYL 305


>tr|B6TPG8|B6TPG8_MAIZE RNA-binding S4 OS=Zea mays PE=2 SV=1
          Length = 304

 Score =  135 bits (341), Expect = 8e-31
 Identities = 67/113 (59%), Positives = 88/113 (77%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           ++L +V K  V C  IPL  + Y+PPR    K+VE+SLRVDA+ASAGFKISR+KLA LIS
Sbjct: 192 STLEKVGKVGVSCTQIPLLALEYEPPRTNSFKTVESSLRVDALASAGFKISRTKLASLIS 251

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
           +GDVRVNW   TKNG+ +KS D++SV+  GR++ G+I TTRKG+Y VEL+RY+
Sbjct: 252 SGDVRVNWTPTTKNGVTLKSRDVVSVSGMGRLKIGEIVTTRKGKYAVELIRYL 304


>tr|A9S0V3|A9S0V3_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_122525 PE=4 SV=1
          Length = 276

 Score =  135 bits (339), Expect = 1e-30
 Identities = 67/113 (59%), Positives = 86/113 (76%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           +SL QVR   V    IPL  +  + PR+   KSVEASLRVDA+ SAGF++SRSKLA+LIS
Sbjct: 164 SSLVQVRNVAVQTSAIPLSALQVKAPRVDTFKSVEASLRVDALTSAGFRMSRSKLAELIS 223

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
           +G+VRVNWKEVTK  L +K+GD++SV  KGR++ G+I  T+KGRY VEL RY+
Sbjct: 224 SGEVRVNWKEVTKTSLTLKTGDVVSVRGKGRIQVGEIVMTKKGRYAVELTRYL 276


>tr|A5B7P7|A5B7P7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_010260 PE=4 SV=1
          Length = 269

 Score =  132 bits (331), Expect = 1e-29
 Identities = 63/113 (55%), Positives = 86/113 (76%)
 Frame = -3

Query: 441 TSLTQVRKTPVLCQTIPLKDIHYQPPRLQITKSVEASLRVDAVASAGFKISRSKLADLIS 262
           +SL +V    V C  +PL  + Y+ PR    K++E SLRVDA+ASAGFK+SRSKL DLIS
Sbjct: 157 SSLEKVGNVSVSCTKMPLLALEYEEPRTTTFKTIELSLRVDALASAGFKLSRSKLVDLIS 216

Query: 261 AGDVRVNWKEVTKNGLLVKSGDIISVNQKGRVEFGQIGTTRKGRYHVELLRYM 103
            GDVRVNW  VTKNG  +K+GD++SV+ KGR++ G+I +T+KG+Y VEL+R++
Sbjct: 217 NGDVRVNWTTVTKNGTTLKTGDVVSVSGKGRLKIGEINSTKKGKYAVELIRFL 269