BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913757|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_H08.
         (445 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ERU9|RBP2_MOUSE E3 SUMO-protein ligase RanBP2 OS=Mus muscul...    30   3.5  
sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2     30   4.6  
sp|Q920H8|HEPH_RAT Hephaestin OS=Rattus norvegicus GN=Heph PE=2 ...    30   5.9  
sp|Q3K892|SYA_PSEPF Alanyl-tRNA synthetase OS=Pseudomonas fluore...    29   7.7  
sp|Q5UQV3|YL371_MIMIV Putative ankyrin repeat protein L371 OS=Ac...    29   7.8  
sp|Q4K843|SYA_PSEF5 Alanyl-tRNA synthetase OS=Pseudomonas fluore...    29   10.0 

>sp|Q9ERU9|RBP2_MOUSE E3 SUMO-protein ligase RanBP2 OS=Mus musculus
           GN=Ranbp2 PE=1 SV=1
          Length = 3053

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +1

Query: 256 HLRRLLIKKSQRKKVMKKALSKIKMLCHLVSY 351
           H+  LL+K  Q+  +  +ALS++  LC+LV++
Sbjct: 293 HVGSLLLKMGQQSDIQWRALSELAALCYLVAF 324


>sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2
          Length = 8797

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
 Frame = +2

Query: 20   DVTKSLSTSASTEQLVSR*NASALPKQVQNHSLLQPRLNN--W*ADKMLPHCSSKF---I 184
            D+ ++ S    T+QL       A+ +++      + RLNN     D ++  C+      +
Sbjct: 3949 DLLETSSLETITQQLAHH---KAMMEEIAG---FEDRLNNLQMKGDTLIGQCADHLQAKL 4002

Query: 185  KENLHASLQMLLTSHVTICTPSDNIYE 265
            K+N+HA LQ    S+  IC+ +  +Y+
Sbjct: 4003 KQNVHAHLQGTKDSYSAICSTAQRMYQ 4029


>sp|Q920H8|HEPH_RAT Hephaestin OS=Rattus norvegicus GN=Heph PE=2
           SV=1
          Length = 1157

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -3

Query: 170 SSAEAFYLLTSCSVEAEVESDFVLALAVRKHFICLPVVQW 51
           S  +AFY + SCS++  VE    L   VR++FI    +QW
Sbjct: 355 SGMQAFYKVDSCSMDPPVEQ---LTGKVRQYFIQAHEIQW 391


>sp|Q3K892|SYA_PSEPF Alanyl-tRNA synthetase OS=Pseudomonas
           fluorescens (strain Pf0-1) GN=alaS PE=3 SV=1
          Length = 874

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 78  MLPHCQSKYKITLYFSLD*TTGKQIKCFRTAQASL 182
           +L H  S Y+I L+ SL   + K I C   AQASL
Sbjct: 245 VLQHVHSNYEIDLFQSLLAASAKAIGCTNDAQASL 279


>sp|Q5UQV3|YL371_MIMIV Putative ankyrin repeat protein L371
           OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L371 PE=4
           SV=1
          Length = 765

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +1

Query: 211 NATDFPCDNMHTK*QHLRRL--LIKKSQRKKVM 303
           N  DF  D+ H+K QHL +L  LIK ++ K+ M
Sbjct: 9   NGDDFNGDDFHSKTQHLNKLFNLIKSNKEKEFM 41


>sp|Q4K843|SYA_PSEF5 Alanyl-tRNA synthetase OS=Pseudomonas
           fluorescens (strain Pf-5 / ATCC BAA-477) GN=alaS PE=3
           SV=1
          Length = 874

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +3

Query: 78  MLPHCQSKYKITLYFSLD*TTGKQIKCFRTAQASL 182
           +L H  S Y+I L+ SL     K I C   AQASL
Sbjct: 245 VLQHVHSNYEIDLFQSLLDAAAKAIGCTNDAQASL 279

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913757|Adiantum capillus-veneris mRNA, clone:
YMU001_000033_H08.
         (445 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8NQS1|B8NQS1_ASPFL Dimethylaniline monooxygenase, putative O...    33   7.0  

>tr|B8NQS1|B8NQS1_ASPFL Dimethylaniline monooxygenase, putative
           OS=Aspergillus flavus NRRL3357 GN=AFLA_002150 PE=4 SV=1
          Length = 483

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +2

Query: 89  LPKQVQNHSLLQPRLNNW*ADKMLPHCSSKFIKENLHASLQMLLTSHVTICTPSDNIYE 265
           LPK +Q      PR N W  D+ L  C      E+LH     + T+++  CTP+  + +
Sbjct: 270 LPKHIQADPHFTPRYNVW--DQRLLACPDGDFFESLHRGNVRIETANIQTCTPNSIVLD 326