BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913769|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_A10.
         (556 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q17353|PAR3_CAEEL Partitioning defective protein 3 OS=Caenorh...    32   2.1  
sp|P25711|NDUS4_NEUCR NADH-ubiquinone oxidoreductase 21 kDa subu...    31   3.6  
sp|Q9Y815|RSV2_SCHPO Zinc finger protein rsv2 OS=Schizosaccharom...    31   4.7  
sp|Q7VJA8|SURE_HELHP 5'-nucleotidase surE OS=Helicobacter hepati...    30   8.0  

>sp|Q17353|PAR3_CAEEL Partitioning defective protein 3
            OS=Caenorhabditis elegans GN=par-3 PE=1 SV=1
          Length = 1379

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 22/84 (26%), Positives = 35/84 (41%)
 Frame = -2

Query: 267  GVRSNVQPDNVKEDVEYYDPNNANDNQFQEGFALGTGEAEEEVLNGTLAGSTIGKLQGLT 88
            G    V P    EDV Y+        ++Q+G   G G A+   +  +    T G   G  
Sbjct: 1186 GAMRRVYPAEYDEDVAYHQQIPQQSTRYQQGSGSGRGNADYHHMFNSWFAYTGGGAVGAA 1245

Query: 87   DVVATKLGLSSSSHLDTSAAESVE 16
             V+ +  G   SS +  +AA ++E
Sbjct: 1246 PVIKSSYG---SSPVRIAAASAIE 1266


>sp|P25711|NDUS4_NEUCR NADH-ubiquinone oxidoreductase 21 kDa
           subunit, mitochondrial OS=Neurospora crassa GN=nuo-21
           PE=1 SV=2
          Length = 218

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
 Frame = +2

Query: 14  VSTLSAAEVSRCELLLKPSLVATT-------SVNP*SFPIVEPARVPFKTSSSASPV--- 163
           ++T SAA + R    + PS++          S  P   P VE ARVP K +   SP+   
Sbjct: 6   ITTASAARMLRTSNAMMPSVMGAAQRRALSDSAEPARVPSVESARVPEKLAKEDSPLATP 65

Query: 164 PRANPSWN 187
            R +P +N
Sbjct: 66  KRNSPDYN 73


>sp|Q9Y815|RSV2_SCHPO Zinc finger protein rsv2
           OS=Schizosaccharomyces pombe GN=rsv2 PE=2 SV=1
          Length = 637

 Score = 30.8 bits (68), Expect = 4.7
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 62  KPSLVATTSVNP*SF-PIVEPARVPFKTSSSASPVPRANP 178
           +PSLV  TSVNP S  P   P  VP  T+ S+SP P  +P
Sbjct: 432 RPSLVLGTSVNPHSLSPSQPPVVVPSNTTISSSP-PLTSP 470


>sp|Q7VJA8|SURE_HELHP 5'-nucleotidase surE OS=Helicobacter hepaticus
           GN=surE PE=3 SV=1
          Length = 264

 Score = 30.0 bits (66), Expect = 8.0
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -2

Query: 177 GFALGTGEAEEEVLNGTLAGSTIGKLQGLTDVVATKL--GLSSSSHLDTSAAE 25
           G  LG+   E+   +GT AG+  G +QG+  +  ++L    + S H D S A+
Sbjct: 93  GINLGSNMGEDITYSGTAAGAMEGCIQGVPSIAISQLMPDKNCSKHFDFSLAK 145

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913769|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_A10.
         (556 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6KRW0|B6KRW0_TOXGO Putative uncharacterized protein OS=Toxop...    34   4.6  
tr|B4D4I5|B4D4I5_9BACT Autotransporter-associated beta strand re...    33   7.9  

>tr|B6KRW0|B6KRW0_TOXGO Putative uncharacterized protein OS=Toxoplasma
            gondii ME49 GN=TGME49_078800 PE=4 SV=1
          Length = 1373

 Score = 34.3 bits (77), Expect = 4.6
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = +2

Query: 77   ATTSVNP*SFPIVEPARVPFKTSSSASPVPRANPSWNWLSLALLGS*YSTSSFTLS 244
            AT   NP SFP   P  +P  + S   P+P + PS +  SL L  +  S  SF+ S
Sbjct: 904  ATALTNPPSFPSPFPTSLPSSSPSPPLPLPSSLPSPSLASLPLSSASLSPGSFSAS 959


>tr|B4D4I5|B4D4I5_9BACT Autotransporter-associated beta strand repeat
            protein OS=Chthoniobacter flavus Ellin428
            GN=CfE428DRAFT_3823 PE=4 SV=1
          Length = 3742

 Score = 33.5 bits (75), Expect = 7.9
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = -2

Query: 213  DPNNANDNQFQEGFALGTGEAEEEVLNGTLAGSTIGKLQGLTDVVATKLGLSSSSHLDTS 34
            D     DN    G   G      +V  GTL  +T G   G T VV+  L + + + L TS
Sbjct: 2531 DTATVQDNVISTGVLAGNNLTLAKVGAGTLTIATTGNTYGATQVVSGTLAVGADNALPTS 2590

Query: 33   AAESVET 13
             A ++ T
Sbjct: 2591 GAVTIGT 2597