BP913774 |
Clone id |
YMU001_000035_B03 |
Library |
YMU01 |
Length |
594 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000035_B03. |
Accession |
BP913774 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGCAGCTGGAGGAGGAGGTTGCAAGTTGTGAAGGTCCTATGATGCAATGGCAAACTAACC TGAAGATGATGGCTTCTAAAGAGCGGCAATATCTCCAACAACTCTCAAATTACAAGGCCG TGTTGAGCCGTATTGGCTATACCCCTGAAATCAATCATGGAGTTCTCATGCAAATGGTTG AGCTTCGCAAAGATTTGGAGAGAAAAACCAAGCCAATTTTGGAAACTCTCCGGAGTTATC AAGATCTTCCTCCAGACAAAGCACTTGCAGAACTTGCGATTGAGGACAAAAAAAGGGAGA TCGAAGCTGCTGAAAAGTACCTCGAAGATGCTCTACAATCGGCACTCAACACCCCAAGTG AATGATGTGGTGGTTTCTTTAGATATTATTCTGTGCAAGTCAGCTTGAGATGTTCTCAGA CTTGCAGATTATGCTGAGTTCAGCAGAGATTGAAGAGTACCAGATTCCCTTTGTGTCTCA AAATATAAGCGGGAGCTGATGGTATTTTAGGCTTTGTGTAAGACTAAAGTTTCTGCTGTA GGCGGTTCTCGTGTAGGTAGCTGGTCCTTACAAACAAGAAGGCTGGCATGAGCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0C218 |
Definition |
sp|P0C218|DDX20_DANRE Probable ATP-dependent RNA helicase DDX20 OS=Danio rerio |
Align length |
49 |
Score (bit) |
36.2 |
E-value |
0.13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TK69 |
Definition |
tr|A9TK69|A9TK69_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
120 |
Score (bit) |
192.0 |
E-value |
1.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913774|Adiantum capillus-veneris mRNA, clone: YMU001_000035_B03. (594 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TK69|A9TK69_PHYPA Predicted protein OS=Physcomitrella paten... 192 1e-47 tr|A5AX07|A5AX07_VITVI Putative uncharacterized protein (Chromos... 178 2e-43 tr|A7QNS9|A7QNS9_VITVI Chromosome undetermined scaffold_134, who... 176 1e-42 tr|Q6Z3N7|Q6Z3N7_ORYSJ Putative uncharacterized protein OSJNBa00... 169 8e-41 tr|B8BC74|B8BC74_ORYSI Putative uncharacterized protein OS=Oryza... 169 8e-41 tr|A3BR06|A3BR06_ORYSJ Putative uncharacterized protein OS=Oryza... 169 8e-41 tr|B6TWD2|B6TWD2_MAIZE Putative uncharacterized protein OS=Zea m... 167 5e-40 tr|Q9ZVC0|Q9ZVC0_ARATH Expressed protein (At2g41350/F13H10.10) (... 159 1e-37 tr|Q2V411|Q2V411_ARATH Uncharacterized protein At2g41350.2 OS=Ar... 154 4e-36 tr|Q0J717|Q0J717_ORYSJ Os08g0240600 protein OS=Oryza sativa subs... 104 3e-21 tr|Q9SJ01|Q9SJ01_ARATH Putative uncharacterized protein At2g2198... 80 9e-14 tr|Q5ZJG9|Q5ZJG9_CHICK Putative uncharacterized protein OS=Gallu... 47 6e-04 tr|Q4SFY2|Q4SFY2_TETNG Chromosome 7 SCAF14601, whole genome shot... 47 0.001 tr|B3S820|B3S820_TRIAD Putative uncharacterized protein OS=Trich... 45 0.002 tr|Q566U6|Q566U6_DANRE Ccdc5 protein (Fragment) OS=Danio rerio G... 45 0.004 tr|B4K4W0|B4K4W0_DROMO GI22412 OS=Drosophila mojavensis GN=GI224... 38 0.50 tr|A0ECV6|A0ECV6_PARTE Chromosome undetermined scaffold_9, whole... 38 0.50 tr|A5K1B5|A5K1B5_PLAVI POM1, putative OS=Plasmodium vivax GN=PVX... 37 1.1 tr|B0S7F5|B0S7F5_DANRE Novel protein similar to DEAD (Asp-Glu-Al... 36 1.4 tr|A6H107|A6H107_FLAPJ Probably involved in regulation of transl... 36 1.4 tr|B4JHT8|B4JHT8_DROGR GH18985 OS=Drosophila grimshawi GN=GH1898... 36 1.4 tr|B4J261|B4J261_DROGR GH16594 OS=Drosophila grimshawi GN=GH1659... 36 1.4 tr|A0DV74|A0DV74_PARTE Chromosome undetermined scaffold_65, whol... 36 1.4 tr|A8PVH0|A8PVH0_MALGO Putative uncharacterized protein OS=Malas... 36 1.4 tr|B8MCW5|B8MCW5_9EURO Putative uncharacterized protein OS=Talar... 36 1.9 tr|B6QDN4|B6QDN4_PENMA Putative uncharacterized protein OS=Penic... 36 1.9 tr|Q9VBP2|Q9VBP2_DROME CG5053 OS=Drosophila melanogaster GN=CG50... 35 3.2 tr|B3LYM9|B3LYM9_DROAN GF16765 OS=Drosophila ananassae GN=GF1676... 35 3.2 tr|Q4KL89|Q4KL89_XENLA Des protein (Fragment) OS=Xenopus laevis ... 35 4.2 tr|B4PTI1|B4PTI1_DROYA GE23613 OS=Drosophila yakuba GN=GE23613 P... 35 4.2
>tr|A9TK69|A9TK69_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_146849 PE=4 SV=1 Length = 293
Score = 192 bits (488), Expect = 1e-47 Identities = 97/120 (80%), Positives = 107/120 (89%) Frame = +3
Query: 3 QLEEEVASCEGPMMQWQTNLKMMASKERQYLQQLSNYKAVLSRIGYTPEINHGVLMQMVE 182 QLEEEVA EGPMMQW TNLKMMASKERQYLQQL+NYK++L R+GYT +I+HGVLM MVE Sbjct: 174 QLEEEVALREGPMMQWNTNLKMMASKERQYLQQLANYKSLLRRLGYTRDISHGVLMAMVE 233
Query: 183 LRKDLERKTKPILETLRSYQDLPPDKALAELAIEDKKREIEAAEKYLEDALQSALNTPSE 362 R +LE KTKPIL+TLRSYQDLPPDKALA LAIEDK+RE EAAEKYLEDAL SAL+TP E Sbjct: 234 HRHELEAKTKPILDTLRSYQDLPPDKALAGLAIEDKRREYEAAEKYLEDALHSALHTPEE 293
>tr|A5AX07|A5AX07_VITVI Putative uncharacterized protein (Chromosome chr5 scaffold_2, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00020313001 PE=4 SV=1 Length = 298
Score = 178 bits (451), Expect = 2e-43 Identities = 87/117 (74%), Positives = 101/117 (86%) Frame = +3
Query: 3 QLEEEVASCEGPMMQWQTNLKMMASKERQYLQQLSNYKAVLSRIGYTPEINHGVLMQMVE 182 QLE++VA CE M W+TNL +M SKERQYLQQ SNYKA+L+R+GYTPEI+HGVL++M E Sbjct: 180 QLEDDVAPCEAQMENWKTNLAIMVSKERQYLQQYSNYKALLNRVGYTPEISHGVLVEMAE 239
Query: 183 LRKDLERKTKPILETLRSYQDLPPDKALAELAIEDKKREIEAAEKYLEDALQSALNT 353 RKDLE+KTKPIL+TLRSYQDLPPDKALA LAIEDKKR+ AAEK+LED L SAL T Sbjct: 240 HRKDLEKKTKPILDTLRSYQDLPPDKALAALAIEDKKRQYAAAEKHLEDVLHSALAT 296
>tr|A7QNS9|A7QNS9_VITVI Chromosome undetermined scaffold_134, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002654001 PE=4 SV=1 Length = 298
Score = 176 bits (445), Expect = 1e-42 Identities = 87/117 (74%), Positives = 100/117 (85%) Frame = +3
Query: 3 QLEEEVASCEGPMMQWQTNLKMMASKERQYLQQLSNYKAVLSRIGYTPEINHGVLMQMVE 182 QLE++VA CE M W+TNL +MASKERQYLQQ NYKA+L+R+GYTPEI+HGVL++M E Sbjct: 180 QLEDDVAPCEAQMENWKTNLAIMASKERQYLQQYRNYKALLNRVGYTPEISHGVLVEMAE 239
Query: 183 LRKDLERKTKPILETLRSYQDLPPDKALAELAIEDKKREIEAAEKYLEDALQSALNT 353 RKDLE+KTKPIL+TLRSYQDLPPDKALA LAIEDKK + AAEK LED LQSAL T Sbjct: 240 HRKDLEKKTKPILDTLRSYQDLPPDKALAALAIEDKKMQYAAAEKRLEDVLQSALAT 296
>tr|Q6Z3N7|Q6Z3N7_ORYSJ Putative uncharacterized protein OSJNBa0087F21.1 (Putative uncharacterized protein P0031C02.6) OS=Oryza sativa subsp. japonica GN=OSJNBa0087F21.1 PE=4 SV=1 Length = 347
Score = 169 bits (429), Expect = 8e-41 Identities = 83/106 (78%), Positives = 92/106 (86%) Frame = +3
Query: 39 MMQWQTNLKMMASKERQYLQQLSNYKAVLSRIGYTPEINHGVLMQMVELRKDLERKTKPI 218 M WQT L MM SKERQY+ Q+SNYKA+L+R+GYTPEINHGVLM+M E +KDLERKTKPI Sbjct: 240 MTDWQTKLVMMDSKERQYILQVSNYKAMLNRVGYTPEINHGVLMEMAEHKKDLERKTKPI 299
Query: 219 LETLRSYQDLPPDKALAELAIEDKKREIEAAEKYLEDALQSALNTP 356 +TLRSYQDLPPDKALA LAIEDKKR+ AAEKYLED LQSAL TP Sbjct: 300 ADTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLQSALTTP 345
>tr|B8BC74|B8BC74_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28364 PE=4 SV=1 Length = 326
Score = 169 bits (429), Expect = 8e-41 Identities = 83/106 (78%), Positives = 92/106 (86%) Frame = +3
Query: 39 MMQWQTNLKMMASKERQYLQQLSNYKAVLSRIGYTPEINHGVLMQMVELRKDLERKTKPI 218 M WQT L MM SKERQY+ Q+SNYKA+L+R+GYTPEINHGVLM+M E +KDLERKTKPI Sbjct: 219 MTDWQTKLVMMDSKERQYILQVSNYKAMLNRVGYTPEINHGVLMEMAEHKKDLERKTKPI 278
Query: 219 LETLRSYQDLPPDKALAELAIEDKKREIEAAEKYLEDALQSALNTP 356 +TLRSYQDLPPDKALA LAIEDKKR+ AAEKYLED LQSAL TP Sbjct: 279 ADTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLQSALTTP 324
>tr|A3BR06|A3BR06_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025478 PE=4 SV=1 Length = 209
Score = 169 bits (429), Expect = 8e-41 Identities = 83/106 (78%), Positives = 92/106 (86%) Frame = +3
Query: 39 MMQWQTNLKMMASKERQYLQQLSNYKAVLSRIGYTPEINHGVLMQMVELRKDLERKTKPI 218 M WQT L MM SKERQY+ Q+SNYKA+L+R+GYTPEINHGVLM+M E +KDLERKTKPI Sbjct: 102 MTDWQTKLVMMDSKERQYILQVSNYKAMLNRVGYTPEINHGVLMEMAEHKKDLERKTKPI 161
Query: 219 LETLRSYQDLPPDKALAELAIEDKKREIEAAEKYLEDALQSALNTP 356 +TLRSYQDLPPDKALA LAIEDKKR+ AAEKYLED LQSAL TP Sbjct: 162 ADTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLQSALTTP 207
>tr|B6TWD2|B6TWD2_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 310
Score = 167 bits (422), Expect = 5e-40 Identities = 82/105 (78%), Positives = 91/105 (86%) Frame = +3
Query: 39 MMQWQTNLKMMASKERQYLQQLSNYKAVLSRIGYTPEINHGVLMQMVELRKDLERKTKPI 218 M WQT L MM SKERQY+ Q+SNYKA+L+R+GYTPEINHGVLM+M E +KDLERKTKPI Sbjct: 203 MTDWQTKLVMMDSKERQYILQVSNYKAMLNRVGYTPEINHGVLMEMAEHKKDLERKTKPI 262
Query: 219 LETLRSYQDLPPDKALAELAIEDKKREIEAAEKYLEDALQSALNT 353 +TLRSYQDLPPDKALA LAIEDKKR+ AAEKYLED LQSAL T Sbjct: 263 ADTLRSYQDLPPDKALAALAIEDKKRQYAAAEKYLEDVLQSALTT 307
>tr|Q9ZVC0|Q9ZVC0_ARATH Expressed protein (At2g41350/F13H10.10) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At2g41350 PE=2 SV=2 Length = 298
Score = 159 bits (401), Expect = 1e-37 Identities = 75/120 (62%), Positives = 96/120 (80%) Frame = +3
Query: 3 QLEEEVASCEGPMMQWQTNLKMMASKERQYLQQLSNYKAVLSRIGYTPEINHGVLMQMVE 182 QLE++V CE M W+TNL++MA KE QY+QQ Y+ +L+R+GYTP+I+H L++M E Sbjct: 179 QLEDDVVPCESQMENWKTNLEVMAVKEEQYIQQYKKYEMLLNRVGYTPKISHRELVEMAE 238
Query: 183 LRKDLERKTKPILETLRSYQDLPPDKALAELAIEDKKREIEAAEKYLEDALQSALNTPSE 362 RK+L++ TKP+L+TLRSYQDLPPDKALA LAIEDKKR+ AAEKYLE+ LQSAL T E Sbjct: 239 HRKELDKMTKPVLDTLRSYQDLPPDKALAALAIEDKKRQFTAAEKYLEEVLQSALETNDE 298
>tr|Q2V411|Q2V411_ARATH Uncharacterized protein At2g41350.2 OS=Arabidopsis thaliana GN=At2g41350 PE=4 SV=1 Length = 299
Score = 154 bits (389), Expect = 4e-36 Identities = 75/121 (61%), Positives = 96/121 (79%), Gaps = 1/121 (0%) Frame = +3
Query: 3 QLEEEVASCEGPMMQWQTNLKMMASKERQYLQQLSNYKAVL-SRIGYTPEINHGVLMQMV 179 QLE++V CE M W+TNL++MA KE QY+QQ Y+ +L +R+GYTP+I+H L++M Sbjct: 179 QLEDDVVPCESQMENWKTNLEVMAVKEEQYIQQYKKYEQMLLNRVGYTPKISHRELVEMA 238
Query: 180 ELRKDLERKTKPILETLRSYQDLPPDKALAELAIEDKKREIEAAEKYLEDALQSALNTPS 359 E RK+L++ TKP+L+TLRSYQDLPPDKALA LAIEDKKR+ AAEKYLE+ LQSAL T Sbjct: 239 EHRKELDKMTKPVLDTLRSYQDLPPDKALAALAIEDKKRQFTAAEKYLEEVLQSALETND 298
Query: 360 E 362 E Sbjct: 299 E 299
>tr|Q0J717|Q0J717_ORYSJ Os08g0240600 protein OS=Oryza sativa subsp. japonica GN=Os08g0240600 PE=4 SV=1 Length = 363
Score = 104 bits (260), Expect = 3e-21 Identities = 55/97 (56%), Positives = 63/97 (64%), Gaps = 25/97 (25%) Frame = +3
Query: 39 MMQWQTNLKMMASKERQYLQQLSNYK-------------------------AVLSRIGYT 143 M WQT L MM SKERQY+ Q+SNYK A+L+R+GYT Sbjct: 219 MTDWQTKLVMMDSKERQYILQVSNYKLGYLELSIPLLVRLHVCRNTLFFDLAMLNRVGYT 278
Query: 144 PEINHGVLMQMVELRKDLERKTKPILETLRSYQDLPP 254 PEINHGVLM+M E +KDLERKTKPI +TLRSYQDLPP Sbjct: 279 PEINHGVLMEMAEHKKDLERKTKPIADTLRSYQDLPP 315
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