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NBDC - LSDB Archive
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BP913790
Clone id YMU001_000035_C09
Library
Length 586
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000035_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGCTTGTCTTCTTCGTCGTCCATATCAATGAAGTCAATCACAATAATACCTCCGATGTCT
CTAAGTCGTAGTTCAGCAGCTATCTGCCGAGCAGCAGCAAGATTTACTTCCAAGATAGCA
GCTGATTTCATATTTTTCCCTAGCATGCCAGTACCACCATTGACATCTATTGTAACTAAA
GCTTCGGTTTCTTGTATCACTAGATAAGCACCATTAGGTAATTGAACTCTTTCGTTCAAA
AGATTATCAATGTCAGCTTCAAGATTGAAGACGTCAAAAATAGGCGTTGTGCCGGTGTAA
AGCTCAACACGATTTTGCAACTGAGGGGCAACCTCTTGCAGATAATATGTGACCTCATGA
TAAGTTTGGGCCGAGTCAACTACCATTCTTTGTACCTTCTCAGCAAAAAAATCTCTTACA
ATCGATAATGTTTGCCCCATTGCTCTATGTAGTAAGGCAGGGACTGCACCGTCTTGTCCA
TTCTGAGCAGCGGTTGAAGAAGATTCAGCCTGCTCCATTATGTCTTTCCATGTCTCCAAT
AAACGTGCCAAATCCTTCTCCAGATCTTCTTGACTTTGACCAGCAG
■■Homology search results ■■ -
sp_hit_id P45175
Definition sp|P45175|RNG_HAEIN Ribonuclease G OS=Haemophilus influenzae
Align length 174
Score (bit) 107.0
E-value 6.0e-23
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913790|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_C09.
         (586 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P45175|RNG_HAEIN Ribonuclease G OS=Haemophilus influenzae GN=...   107   6e-23
sp|P0A9J3|RNG_SHIFL Ribonuclease G OS=Shigella flexneri GN=rng P...   104   3e-22
sp|P0A9J0|RNG_ECOLI Ribonuclease G OS=Escherichia coli (strain K...   104   3e-22
sp|P0A9J1|RNG_ECOL6 Ribonuclease G OS=Escherichia coli O6 GN=rng...   104   3e-22
sp|P0A9J2|RNG_ECO57 Ribonuclease G OS=Escherichia coli O157:H7 G...   104   3e-22
sp|P44443|RNE_HAEIN Ribonuclease E OS=Haemophilus influenzae GN=...   101   2e-21
sp|Q89AH3|RNE_BUCBP Putative truncated ribonuclease E OS=Buchner...    94   6e-19
sp|P21513|RNE_ECOLI Ribonuclease E OS=Escherichia coli (strain K...    91   5e-18
sp|P57429|RNE_BUCAI Ribonuclease E OS=Buchnera aphidicola subsp....    88   4e-17
sp|Q8K9J9|RNE_BUCAP Ribonuclease E OS=Buchnera aphidicola subsp....    84   4e-16
sp|P72656|RNE_SYNY3 Ribonuclease E homolog OS=Synechocystis sp. ...    73   9e-13
sp|P51211|RNE_PORPU Ribonuclease E homolog OS=Porphyra purpurea ...    69   2e-11
sp|Q1XDS6|RNE_PORYE Ribonuclease E homolog OS=Porphyra yezoensis...    68   3e-11
sp|O78453|RNE_GUITH Ribonuclease E homolog OS=Guillardia theta G...    47   9e-05
sp|A2RIX1|ENO_LACLM Enolase OS=Lactococcus lactis subsp. cremori...    32   2.3  
sp|Q030Y9|ENO2_LACLS Enolase 2 OS=Lactococcus lactis subsp. crem...    32   2.3  
sp|Q9CHS7|ENO1_LACLA Enolase 1 OS=Lactococcus lactis subsp. lact...    32   2.3  
sp|Q7V9S8|PANCY_PROMA Bifunctional pantoate ligase/cytidylate ki...    32   3.0  
sp|Q5FB27|ADO_MACFA Aldehyde oxidase OS=Macaca fascicularis GN=A...    31   5.2  
sp|Q6W8W5|POL1_ARMVN RNA1 polyprotein OS=Arabis mosaic virus (is...    31   5.2  
sp|P25078|PHR_SALTY Deoxyribodipyrimidine photo-lyase OS=Salmone...    31   5.2  
sp|Q58961|Y1566_METJA Uncharacterized protein MJ1566 OS=Methanoc...    30   6.7  
sp|Q5ZXD1|PUR8_LEGPH Adenylosuccinate lyase OS=Legionella pneumo...    30   6.7  
sp|P20301|APRN_ENTHI Antigenic protein NP1 (Fragment) OS=Entamoe...    30   6.7  
sp|Q5KKT9|TRM6_CRYNE tRNA (adenine-N(1)-)-methyltransferase non-...    30   8.8  
sp|Q9M0R2|PATL5_ARATH Patellin-5 OS=Arabidopsis thaliana GN=PATL...    30   8.8  
sp|Q6NZL6|IKBL2_MOUSE NF-kappa-B inhibitor-like protein 2 OS=Mus...    30   8.8  
sp|Q2A278|ENO_FRATH Enolase OS=Francisella tularensis subsp. hol...    30   8.8  
sp|A7HVV8|DNLJ_PARL1 DNA ligase OS=Parvibaculum lavamentivorans ...    30   8.8  
sp|Q96J92|WNK4_HUMAN Serine/threonine-protein kinase WNK4 OS=Hom...    30   8.9  

>sp|P45175|RNG_HAEIN Ribonuclease G OS=Haemophilus influenzae GN=rng
           PE=3 SV=1
          Length = 491

 Score =  107 bits (266), Expect = 6e-23
 Identities = 58/174 (33%), Positives = 99/174 (56%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G S+E+L +D   L   W+ ++E+     T ++   + A+P            I+RDF  
Sbjct: 177 GASEEELRQDAEFLKRLWRKVLERKSKYPTKSKIYGEPALPQ----------RILRDFIG 226

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERVQ 222
             ++++ +DS   + EV  +  E  P+L +++ LY+G  PIFDV+ +E  I   L++RV 
Sbjct: 227 TNLEKIRIDSKLCFGEVKEFTDEFMPELSDKLVLYSGNQPIFDVYGVENAIQTALDKRVN 286

Query: 221 LPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           L +G YL+I++TEA+ TID+N G  +  +N++   I   N+ A + IA EL+LR
Sbjct: 287 LKSGGYLIIEQTEAMTTIDINTGAFVGHRNLEE-TIFNTNIEATKAIAHELQLR 339


>sp|P0A9J3|RNG_SHIFL Ribonuclease G OS=Shigella flexneri GN=rng PE=3
           SV=2
          Length = 489

 Score =  104 bits (260), Expect = 3e-22
 Identities = 57/174 (32%), Positives = 94/174 (54%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G  + +L  D A L   W  +ME+ +   T  Q          L+  +     ++RDF  
Sbjct: 176 GVGEAELASDAAYLKRVWTKVMERKKRPQTRYQ----------LYGELALAQRVLRDFAD 225

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERVQ 222
            ++ R+ VDS  TY  +  +  E  P++ +++E YTG  PIFD+F++E +I   L  +V+
Sbjct: 226 AELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVE 285

Query: 221 LPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           L +G YL+I +TEA+ T+D+N G  +  +N+    I   N+ A + IA +LRLR
Sbjct: 286 LKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDD-TIFNTNIEATQAIARQLRLR 338


>sp|P0A9J0|RNG_ECOLI Ribonuclease G OS=Escherichia coli (strain K12)
           GN=rng PE=1 SV=2
          Length = 489

 Score =  104 bits (260), Expect = 3e-22
 Identities = 57/174 (32%), Positives = 94/174 (54%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G  + +L  D A L   W  +ME+ +   T  Q          L+  +     ++RDF  
Sbjct: 176 GVGEAELASDAAYLKRVWTKVMERKKRPQTRYQ----------LYGELALAQRVLRDFAD 225

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERVQ 222
            ++ R+ VDS  TY  +  +  E  P++ +++E YTG  PIFD+F++E +I   L  +V+
Sbjct: 226 AELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVE 285

Query: 221 LPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           L +G YL+I +TEA+ T+D+N G  +  +N+    I   N+ A + IA +LRLR
Sbjct: 286 LKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDD-TIFNTNIEATQAIARQLRLR 338


>sp|P0A9J1|RNG_ECOL6 Ribonuclease G OS=Escherichia coli O6 GN=rng
           PE=3 SV=2
          Length = 489

 Score =  104 bits (260), Expect = 3e-22
 Identities = 57/174 (32%), Positives = 94/174 (54%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G  + +L  D A L   W  +ME+ +   T  Q          L+  +     ++RDF  
Sbjct: 176 GVGEAELASDAAYLKRVWTKVMERKKRPQTRYQ----------LYGELALAQRVLRDFAD 225

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERVQ 222
            ++ R+ VDS  TY  +  +  E  P++ +++E YTG  PIFD+F++E +I   L  +V+
Sbjct: 226 AELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVE 285

Query: 221 LPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           L +G YL+I +TEA+ T+D+N G  +  +N+    I   N+ A + IA +LRLR
Sbjct: 286 LKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDD-TIFNTNIEATQAIARQLRLR 338


>sp|P0A9J2|RNG_ECO57 Ribonuclease G OS=Escherichia coli O157:H7
           GN=rng PE=3 SV=2
          Length = 489

 Score =  104 bits (260), Expect = 3e-22
 Identities = 57/174 (32%), Positives = 94/174 (54%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G  + +L  D A L   W  +ME+ +   T  Q          L+  +     ++RDF  
Sbjct: 176 GVGEAELASDAAYLKRVWTKVMERKKRPQTRYQ----------LYGELALAQRVLRDFAD 225

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERVQ 222
            ++ R+ VDS  TY  +  +  E  P++ +++E YTG  PIFD+F++E +I   L  +V+
Sbjct: 226 AELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEIQRALERKVE 285

Query: 221 LPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           L +G YL+I +TEA+ T+D+N G  +  +N+    I   N+ A + IA +LRLR
Sbjct: 286 LKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDD-TIFNTNIEATQAIARQLRLR 338


>sp|P44443|RNE_HAEIN Ribonuclease E OS=Haemophilus influenzae GN=rne
           PE=3 SV=1
          Length = 935

 Score =  101 bits (252), Expect = 2e-21
 Identities = 56/174 (32%), Positives = 94/174 (54%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G+S E+L+ DL  LL  W+ I + ++S             P L+H+     +  +RD+  
Sbjct: 174 GKSPEELQWDLKVLLHHWEAIKQASQSRPA----------PFLIHQESDVIVRAIRDYLR 223

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERVQ 222
             +  +++DS + + +   +++ V P   NRV+LY G  P+F  + +E+ I++     V+
Sbjct: 224 RDIGEILIDSPKIFEKAKEHIKLVRPDFINRVKLYQGEVPLFSHYQIESQIESAFQREVR 283

Query: 221 LPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           LP+G  +VI  TEAL  ID+N      G +++  A L  NL AA +IA +LRLR
Sbjct: 284 LPSGGSIVIDVTEALTAIDINSARSTRGGDIEETA-LNTNLEAADEIARQLRLR 336


>sp|Q89AH3|RNE_BUCBP Putative truncated ribonuclease E OS=Buchnera
           aphidicola subsp. Baizongia pistaciae GN=rne PE=3 SV=1
          Length = 410

 Score = 93.6 bits (231), Expect = 6e-19
 Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 1/175 (0%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G+S E L+ DL   ++ W  I + AE ++           P L+H+     +  +RD+  
Sbjct: 174 GRSIETLQLDLNFRVKNWYTIKKSAEINTA----------PCLIHKESNIVIRTLRDYLK 223

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEV-APQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
           + +Q ++VD+ +       Y+  +     + +++LYTG+ P+F  + +E+ I+ LL   V
Sbjct: 224 KDIQEIIVDNPEILELARDYMFNMNCSYFEKKIKLYTGSDPLFSYYKIESQINALLRRIV 283

Query: 224 QLPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           +LP+G  ++I  TEAL  ID+N      G N++  A    N  A R+IA +LRLR
Sbjct: 284 KLPSGGSIIIDYTEALTAIDINSSQSTKGVNIEETA-FNTNYEAVREIARQLRLR 337


>sp|P21513|RNE_ECOLI Ribonuclease E OS=Escherichia coli (strain K12)
           GN=rne PE=1 SV=6
          Length = 1061

 Score = 90.5 bits (223), Expect = 5e-18
 Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G+S E L+ DL+  L+ W+ I + AES             P L+H+     +   RD+  
Sbjct: 174 GKSAEALQWDLSFRLKHWEAIKKAAESRPA----------PFLIHQESNVIVRAFRDYLR 223

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEVA-PQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
           + +  +++D+ +       ++  +  P   ++++LYTG  P+F  + +E+ I++     V
Sbjct: 224 QDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREV 283

Query: 224 QLPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           +LP+G  +VI  TEAL  ID+N      G +++  A    NL AA +IA +LRLR
Sbjct: 284 RLPSGGSIVIDSTEALTAIDINSARATRGGDIEETA-FNTNLEAADEIARQLRLR 337


>sp|P57429|RNE_BUCAI Ribonuclease E OS=Buchnera aphidicola subsp.
           Acyrthosiphon pisum GN=rne PE=3 SV=1
          Length = 902

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 51/176 (28%), Positives = 90/176 (51%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584 AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
           AG+S E L  DL+  L+ WK I   A+S +           P L+H+     +   RD+ 
Sbjct: 173 AGKSIESLRWDLSLRLQHWKTIQIIAKSRTA----------PFLIHQESNIIVRAFRDYL 222

Query: 404 AEKVQRMVVDSAQTYHEVTYYLQEVA-PQLQNRVELYTGTTPIFDVFNLEADIDNLLNER 228
            + +  +++D+ +       ++  +  P   N+++LY+G  P+F  F +E  I++    +
Sbjct: 223 RQDIGEILIDNPKILDLARKHITFLGRPDFVNKIKLYSGEVPLFSYFQIETQINSAFQRK 282

Query: 227 VQLPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           V+LP+G  +++  TEAL  ID+N      G ++ S A    NL A  +I+ +LRLR
Sbjct: 283 VRLPSGGSIMVDSTEALTAIDINSSRSTSGTDIASTA-FNTNLEAVDEISRQLRLR 337


>sp|Q8K9J9|RNE_BUCAP Ribonuclease E OS=Buchnera aphidicola subsp.
           Schizaphis graminum GN=rne PE=3 SV=1
          Length = 968

 Score = 84.3 bits (207), Expect = 4e-16
 Identities = 46/175 (26%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G+S + L+ DL+  L+ W  I + ++  S           P L+++     +   RD+  
Sbjct: 174 GKSIKSLQWDLSLRLKHWNAIKKASKKKSA----------PFLIYQESNVIVRAFRDYLR 223

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEVA-PQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
           + +  +++D+ +       ++  +  P   N+++LYTG  P+F  + +E+ ID+    +V
Sbjct: 224 QDIGEILIDNPKILDIAREHITALGRPDFINKIKLYTGEIPLFSYYQIESQIDSAFQRKV 283

Query: 224 QLPNGAYLVIQETEALVTIDVNGGTGMLGKNMKSAAILEVNLAAARQIAAELRLR 60
           +LP+G  +++  TEAL  ID+N      G ++++ A    NL A  +I+ +LRLR
Sbjct: 284 RLPSGGSIMVDTTEALTAIDINSSRSTRGADIETTA-FNTNLEAVEEISRQLRLR 337
tr_hit_id A9RK39
Definition tr|A9RK39|A9RK39_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 175
Score (bit) 231.0
E-value 3.0e-59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913790|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_C09.
         (586 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RK39|A9RK39_PHYPA Predicted protein OS=Physcomitrella paten...   231   3e-59
tr|A7Q2X2|A7Q2X2_VITVI Chromosome chr12 scaffold_47, whole genom...   220   4e-56
tr|Q9M498|Q9M498_ARATH Endoribonuclease E (Fragment) OS=Arabidop...   215   2e-54
tr|Q8RWB3|Q8RWB3_ARATH Putative ribonuclease E (At2g04270) OS=Ar...   215   2e-54
tr|Q8GZQ4|Q8GZQ4_ARATH Endoribonuclease OS=Arabidopsis thaliana ...   215   2e-54
tr|Q8GVF1|Q8GVF1_ARATH Putative endoribonuclease E OS=Arabidopsi...   215   2e-54
tr|Q6Z0E3|Q6Z0E3_ORYSJ Os08g0323600 protein OS=Oryza sativa subs...   211   2e-53
tr|B8B9Q9|B8B9Q9_ORYSI Putative uncharacterized protein OS=Oryza...   211   2e-53
tr|A3BRW9|A3BRW9_ORYSJ Putative uncharacterized protein OS=Oryza...   211   2e-53
tr|B0LV36|B0LV36_SOLLC Ribonuclease E OS=Solanum lycopersicum PE...   210   5e-53
tr|Q69PQ8|Q69PQ8_ORYSJ Putative endoribonuclease E OS=Oryza sati...   201   3e-50
tr|Q9SI08|Q9SI08_ARATH Putative ribonuclease E OS=Arabidopsis th...   144   5e-33
tr|A8ZRZ1|A8ZRZ1_DESOH Ribonuclease, Rne/Rng family OS=Desulfoco...   133   6e-30
tr|A0LIP4|A0LIP4_SYNFM RNAse G OS=Syntrophobacter fumaroxidans (...   122   2e-26
tr|Q0YEZ1|Q0YEZ1_9DELT Ribonuclease, Rne/Rng family OS=Geobacter...   121   3e-26
tr|Q6AK16|Q6AK16_DESPS Related to cytoplasmic axial filament pro...   120   4e-26
tr|A5GD24|A5GD24_GEOUR Ribonuclease G OS=Geobacter uraniireducen...   120   6e-26
tr|B5E953|B5E953_GEOBB Ribonuclease, Rne/Rng family OS=Geobacter...   120   7e-26
tr|Q1JWI5|Q1JWI5_DESAC Ribonuclease, Rne/Rng family OS=Desulfuro...   119   1e-25
tr|Q1NQ12|Q1NQ12_9DELT Ribonuclease E and G OS=delta proteobacte...   119   2e-25
tr|Q1NMJ6|Q1NMJ6_9DELT Ribonuclease E and G OS=delta proteobacte...   119   2e-25
tr|B2KEH9|B2KEH9_ELUMP Ribonuclease, Rne/Rng family OS=Elusimicr...   118   2e-25
tr|B3K0D8|B3K0D8_9DELT Ribonuclease, Rne/Rng family OS=Geobacter...   118   3e-25
tr|Q39QR9|Q39QR9_GEOMG Ribonuclease G OS=Geobacter metallireduce...   117   4e-25
tr|Q3A1D5|Q3A1D5_PELCD Ribonuclease G OS=Pelobacter carbinolicus...   117   6e-25
tr|B8FM65|B8FM65_9DELT Ribonuclease, Rne/Rng family OS=Desulfati...   117   6e-25
tr|B0MWB1|B0MWB1_9BACT Putative uncharacterized protein OS=Alist...   117   6e-25
tr|Q747M6|Q747M6_GEOSL Ribonuclease G OS=Geobacter sulfurreducen...   116   8e-25
tr|A1S2S5|A1S2S5_SHEAM RNAse G OS=Shewanella amazonensis (strain...   115   1e-24
tr|Q142M4|Q142M4_BURXL Ribonuclease G OS=Burkholderia xenovorans...   115   2e-24

>tr|A9RK39|A9RK39_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_115589 PE=4 SV=1
          Length = 727

 Score =  231 bits (588), Expect = 3e-59
 Identities = 114/175 (65%), Positives = 142/175 (81%), Gaps = 1/175 (0%)
 Frame = -3

Query: 581 GQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFFA 402
           G  QE+LE+DL RL++ WK+IME+A +++ A + G++ AVP LLHR MGQTL+I+RD F 
Sbjct: 349 GHEQEELERDLTRLMDAWKEIMEKAAAAAVAVERGEEAAVPVLLHREMGQTLTIIRDLFT 408

Query: 401 EKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERVQ 222
           EKV R+VVDSAQ++ EV  YLQEVAP L NRV LY+G  PIFD FN+E+D+D   +ERV+
Sbjct: 409 EKVSRVVVDSAQSFQEVINYLQEVAPHLMNRVVLYSGKVPIFDKFNVESDLDKFFSERVK 468

Query: 221 LPNGAYLVIQETEALVTIDVNGGTGMLGKNMKS-AAILEVNLAAARQIAAELRLR 60
           LPNG YLV+QETEALV+IDVNGGTGMLG +MK   AIL VNLAAA+QIA E+RLR
Sbjct: 469 LPNGGYLVMQETEALVSIDVNGGTGMLGHSMKQREAILNVNLAAAKQIAHEIRLR 523


>tr|A7Q2X2|A7Q2X2_VITVI Chromosome chr12 scaffold_47, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00029064001
            PE=4 SV=1
          Length = 945

 Score =  220 bits (561), Expect = 4e-56
 Identities = 111/176 (63%), Positives = 142/176 (80%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584  AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
            AG + E+L+KDL  LL TWK+I+E A+S++ AA  G +GA+P +LHRAMGQTLS+V+D+F
Sbjct: 565  AGHTLEELQKDLEGLLSTWKNIVEHAKSAALAADEGVEGAIPVILHRAMGQTLSVVQDYF 624

Query: 404  AEKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
             EKV+ MVVDS +TYHEVT YLQE+AP L +RVELY    P+FD FN+E +I+N+L++RV
Sbjct: 625  NEKVESMVVDSPRTYHEVTNYLQEIAPDLCDRVELYNKRVPLFDEFNIEEEINNILSKRV 684

Query: 224  QLPNGAYLVIQETEALVTIDVNGGTGMLGK-NMKSAAILEVNLAAARQIAAELRLR 60
             LPNG  LVI++TEALV+IDVNGG GMLG    +  AIL+VNLAAA+QIA ELRLR
Sbjct: 685  PLPNGGSLVIEQTEALVSIDVNGGHGMLGNGTSQEKAILDVNLAAAKQIARELRLR 740


>tr|Q9M498|Q9M498_ARATH Endoribonuclease E (Fragment) OS=Arabidopsis
           thaliana GN=rne PE=2 SV=1
          Length = 575

 Score =  215 bits (547), Expect = 2e-54
 Identities = 108/176 (61%), Positives = 144/176 (81%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584 AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
           AG S E+L+KDL  LL TWK+I ++A+S++ AA  G +GA+PALLHRAMGQTLS+V+D+F
Sbjct: 284 AGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAIPALLHRAMGQTLSVVQDYF 343

Query: 404 AEKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
            +KV++MVVDS +TYHEVT+YLQ++AP L NRVEL+    P+FD++ +E +I+ +L++RV
Sbjct: 344 NDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIPLFDLYEIEEEIEGILSKRV 403

Query: 224 QLPNGAYLVIQETEALVTIDVNGGTGMLGK-NMKSAAILEVNLAAARQIAAELRLR 60
            L NG  LVI++TEALV+IDVNGG GM G+ N +  AILEVNLAAARQIA E+RLR
Sbjct: 404 PLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEVNLAAARQIAREIRLR 459


>tr|Q8RWB3|Q8RWB3_ARATH Putative ribonuclease E (At2g04270)
           OS=Arabidopsis thaliana GN=At2g04270 PE=2 SV=1
          Length = 713

 Score =  215 bits (547), Expect = 2e-54
 Identities = 108/176 (61%), Positives = 144/176 (81%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584 AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
           AG S E+L+KDL  LL TWK+I ++A+S++ AA  G +GA+PALLHRAMGQTLS+V+D+F
Sbjct: 328 AGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAIPALLHRAMGQTLSVVQDYF 387

Query: 404 AEKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
            +KV++MVVDS +TYHEVT+YLQ++AP L NRVEL+    P+FD++ +E +I+ +L++RV
Sbjct: 388 NDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIPLFDLYEIEEEIEGILSKRV 447

Query: 224 QLPNGAYLVIQETEALVTIDVNGGTGMLGK-NMKSAAILEVNLAAARQIAAELRLR 60
            L NG  LVI++TEALV+IDVNGG GM G+ N +  AILEVNLAAARQIA E+RLR
Sbjct: 448 PLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEVNLAAARQIAREIRLR 503


>tr|Q8GZQ4|Q8GZQ4_ARATH Endoribonuclease OS=Arabidopsis thaliana
            GN=At2g04270 PE=2 SV=1
          Length = 996

 Score =  215 bits (547), Expect = 2e-54
 Identities = 108/176 (61%), Positives = 144/176 (81%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584  AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
            AG S E+L+KDL  LL TWK+I ++A+S++ AA  G +GA+PALLHRAMGQTLS+V+D+F
Sbjct: 611  AGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAIPALLHRAMGQTLSVVQDYF 670

Query: 404  AEKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
             +KV++MVVDS +TYHEVT+YLQ++AP L NRVEL+    P+FD++ +E +I+ +L++RV
Sbjct: 671  NDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIPLFDLYEIEEEIEGILSKRV 730

Query: 224  QLPNGAYLVIQETEALVTIDVNGGTGMLGK-NMKSAAILEVNLAAARQIAAELRLR 60
             L NG  LVI++TEALV+IDVNGG GM G+ N +  AILEVNLAAARQIA E+RLR
Sbjct: 731  PLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEVNLAAARQIAREIRLR 786


>tr|Q8GVF1|Q8GVF1_ARATH Putative endoribonuclease E OS=Arabidopsis
           thaliana GN=rne PE=2 SV=1
          Length = 818

 Score =  215 bits (547), Expect = 2e-54
 Identities = 108/176 (61%), Positives = 144/176 (81%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584 AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
           AG S E+L+KDL  LL TWK+I ++A+S++ AA  G +GA+PALLHRAMGQTLS+V+D+F
Sbjct: 433 AGHSLEELQKDLDGLLLTWKNITDEAKSAALAADEGVEGAIPALLHRAMGQTLSVVQDYF 492

Query: 404 AEKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
            +KV++MVVDS +TYHEVT+YLQ++AP L NRVEL+    P+FD++ +E +I+ +L++RV
Sbjct: 493 NDKVEKMVVDSPRTYHEVTHYLQDMAPDLCNRVELHDKGIPLFDLYEIEEEIEGILSKRV 552

Query: 224 QLPNGAYLVIQETEALVTIDVNGGTGMLGK-NMKSAAILEVNLAAARQIAAELRLR 60
            L NG  LVI++TEALV+IDVNGG GM G+ N +  AILEVNLAAARQIA E+RLR
Sbjct: 553 PLSNGGSLVIEQTEALVSIDVNGGHGMFGQGNSQEKAILEVNLAAARQIAREIRLR 608


>tr|Q6Z0E3|Q6Z0E3_ORYSJ Os08g0323600 protein OS=Oryza sativa subsp.
            japonica GN=OSJNBa0078D03.16-1 PE=4 SV=1
          Length = 1085

 Score =  211 bits (537), Expect = 2e-53
 Identities = 110/176 (62%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584  AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
            AG S E+L+KDL RLL TWK I+E A+S++ AA+ G +GAVP +LHR+ GQ LS+V+D F
Sbjct: 707  AGHSWEELQKDLDRLLSTWKGIIEHAQSAALAAEEGVEGAVPVMLHRSKGQALSVVQDDF 766

Query: 404  AEKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
             EKV+R+VVDS +TYHEVT YLQEVAP+L NRV+LY   TPIFD + +E +IDN+L +RV
Sbjct: 767  NEKVKRLVVDSPRTYHEVTNYLQEVAPELCNRVDLYEKRTPIFDEYKIEKEIDNILCKRV 826

Query: 224  QLPNGAYLVIQETEALVTIDVNGGTGMLGK-NMKSAAILEVNLAAARQIAAELRLR 60
             L NG  LVI++TEALV+IDVNGG  M G+   +  AILEVNL AA+QIA ELRLR
Sbjct: 827  PLHNGGSLVIEQTEALVSIDVNGGHSMFGQGTSQEKAILEVNLEAAKQIARELRLR 882


>tr|B8B9Q9|B8B9Q9_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_28778 PE=4 SV=1
          Length = 1036

 Score =  211 bits (537), Expect = 2e-53
 Identities = 110/176 (62%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584  AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
            AG S E+L+KDL RLL TWK I+E A+S++ AA+ G +GAVP +LHR+ GQ LS+V+D F
Sbjct: 658  AGHSWEELQKDLDRLLSTWKGIIEHAQSAALAAEEGVEGAVPVMLHRSKGQALSVVQDDF 717

Query: 404  AEKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
             EKV+R+VVDS +TYHEVT YLQEVAP+L NRV+LY   TPIFD + +E +IDN+L +RV
Sbjct: 718  NEKVKRLVVDSPRTYHEVTNYLQEVAPELCNRVDLYEKRTPIFDEYKIEKEIDNILCKRV 777

Query: 224  QLPNGAYLVIQETEALVTIDVNGGTGMLGK-NMKSAAILEVNLAAARQIAAELRLR 60
             L NG  LVI++TEALV+IDVNGG  M G+   +  AILEVNL AA+QIA ELRLR
Sbjct: 778  PLHNGGSLVIEQTEALVSIDVNGGHSMFGQGTSQEKAILEVNLEAAKQIARELRLR 833


>tr|A3BRW9|A3BRW9_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_025791 PE=4 SV=1
          Length = 1080

 Score =  211 bits (537), Expect = 2e-53
 Identities = 110/176 (62%), Positives = 138/176 (78%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584  AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
            AG S E+L+KDL RLL TWK I+E A+S++ AA+ G +GAVP +LHR+ GQ LS+V+D F
Sbjct: 707  AGHSWEELQKDLDRLLSTWKGIIEHAQSAALAAEEGVEGAVPVMLHRSKGQALSVVQDDF 766

Query: 404  AEKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
             EKV+R+VVDS +TYHEVT YLQEVAP+L NRV+LY   TPIFD + +E +IDN+L +RV
Sbjct: 767  NEKVKRLVVDSPRTYHEVTNYLQEVAPELCNRVDLYEKRTPIFDEYKIEKEIDNILCKRV 826

Query: 224  QLPNGAYLVIQETEALVTIDVNGGTGMLGK-NMKSAAILEVNLAAARQIAAELRLR 60
             L NG  LVI++TEALV+IDVNGG  M G+   +  AILEVNL AA+QIA ELRLR
Sbjct: 827  PLHNGGSLVIEQTEALVSIDVNGGHSMFGQGTSQEKAILEVNLEAAKQIARELRLR 882


>tr|B0LV36|B0LV36_SOLLC Ribonuclease E OS=Solanum lycopersicum PE=2
            SV=1
          Length = 935

 Score =  210 bits (534), Expect = 5e-53
 Identities = 107/176 (60%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
 Frame = -3

Query: 584  AGQSQEDLEKDLARLLETWKDIMEQAESSSTAAQNGQDGAVPALLHRAMGQTLSIVRDFF 405
            AG S  +L+KDL  LL TWK I+E A+S++ AA  G DGAVP +LH+AMGQTLS+V+D+F
Sbjct: 555  AGHSLNELQKDLEGLLSTWKSIIEHAKSAALAADEGVDGAVPVMLHQAMGQTLSVVQDYF 614

Query: 404  AEKVQRMVVDSAQTYHEVTYYLQEVAPQLQNRVELYTGTTPIFDVFNLEADIDNLLNERV 225
            ++KV  +VVDS +TYHEVT YLQE+AP L  RVEL+   TP+FD +N+E +I+N+L++RV
Sbjct: 615  SDKVNSLVVDSPRTYHEVTNYLQEMAPNLCERVELHGTRTPLFDEYNIEEEINNILSKRV 674

Query: 224  QLPNGAYLVIQETEALVTIDVNGGTGMLGK-NMKSAAILEVNLAAARQIAAELRLR 60
             L NG YLVI++TEALV+IDVNGG  +LG+   +  AIL VNLAAARQIA E+RLR
Sbjct: 675  PLDNGGYLVIEQTEALVSIDVNGGHCVLGQGTSQEMAILNVNLAAARQIAREIRLR 730