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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913799
Clone id YMU001_000035_D09
Library
Length 476
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000035_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTANTTCTTTCTCCACATGTAAGGTCAATACATAAGGTCCGATAGTCTGATTGTGGATCT
ATTGGTCGAACGCAAAACTCTTTATGCGATACATAATGGCTTCGAAGAGTAGCATATAGT
CAATCACACTATCTCCATTGTGTTTTCTACATGTAAATCCATCGATTCCACTCCATAAAG
ATACACCATTGCCAATGAGCGTACCCGTGCTAGTTAACATATATAGAAATAACTTTCCAT
AGTGATCCCTCTCTTTCTCATCCATTGAAGTATGATTATACAAGTAACTTTCCGCAATTA
TTCGTATTCATATCCCAAAAGACAATAGCGTCACCTTTTCCTTTAAAATAGGCAATGTCC
TCCTCTAAATCAACATCTACCCATGCAAGCATAAAAGGAAGAATCATGAAGAGCGATGTC
GCAACCGGCTACAAAAATGGGTGCTCCTTTTGGTGTCATACTTTTCATCCATATAT
■■Homology search results ■■ -
sp_hit_id P34248
Definition sp|P34248|YKK0_YEAST Probable intramembrane protease YKL100C OS=Saccharomyces cerevisiae
Align length 61
Score (bit) 30.0
E-value 5.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913799|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_D09.
         (476 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34248|YKK0_YEAST Probable intramembrane protease YKL100C OS=...    30   5.5  

>sp|P34248|YKK0_YEAST Probable intramembrane protease YKL100C
           OS=Saccharomyces cerevisiae GN=YKL100C PE=1 SV=1
          Length = 587

 Score = 30.0 bits (66), Expect = 5.5
 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = +3

Query: 63  WSNAKLFMRYIMASKSSI*SITLSPLCFLH---VNPSIPLHKDTPLPMSVPVLVNIYRNN 233
           WS A+L ++ + +    + ++    +CF+    V  ++  + D P+ +S+PV  N  +NN
Sbjct: 342 WSIAQLKLKNLKSGALILIALFFYDICFVFGTDVMVTVATNLDIPVKLSLPVKFNTAQNN 401

Query: 234 F 236
           F
Sbjct: 402 F 402
tr_hit_id Q91QZ3
Definition tr|Q91QZ3|Q91QZ3_9VIRU Putative uncharacterized protein (Putative replicase polyprotein) OS=Citrus leaf blotch virus
Align length 46
Score (bit) 33.5
E-value 5.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913799|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_D09.
         (476 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q91QZ3|Q91QZ3_9VIRU Putative uncharacterized protein (Putativ...    33   5.4  
tr|Q8JXQ2|Q8JXQ2_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXQ1|Q8JXQ1_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXQ0|Q8JXQ0_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXP9|Q8JXP9_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXP8|Q8JXP8_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXP7|Q8JXP7_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXP6|Q8JXP6_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXP5|Q8JXP5_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXP4|Q8JXP4_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXP3|Q8JXP3_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXP2|Q8JXP2_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXP1|Q8JXP1_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|Q8JXN9|Q8JXN9_9VIRU Polyprotein (Fragment) OS=Citrus leaf blo...    33   5.4  
tr|B5TRQ1|B5TRQ1_9VIRU Replicase polyprotein OS=Dweet mottle vir...    33   5.4  
tr|B5AMJ0|B5AMJ0_9VIRU Putative replicase polyprotein OS=Citrus ...    33   5.4  
tr|Q05EF1|Q05EF1_LYCRB Blue-sensitive rhodopsin OS=Lycaena rubid...    33   5.4  

>tr|Q91QZ3|Q91QZ3_9VIRU Putative uncharacterized protein (Putative
           replicase polyprotein) OS=Citrus leaf blotch virus PE=4
           SV=1
          Length = 1962

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 758 IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDP 803


>tr|Q8JXQ2|Q8JXQ2_9VIRU Polyprotein (Fragment) OS=Citrus leaf blotch
           virus PE=4 SV=1
          Length = 137

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 19  IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNVSTLTSDP 64


>tr|Q8JXQ1|Q8JXQ1_9VIRU Polyprotein (Fragment) OS=Citrus leaf blotch
           virus PE=4 SV=1
          Length = 137

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 19  IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNVSTLTSDP 64


>tr|Q8JXQ0|Q8JXQ0_9VIRU Polyprotein (Fragment) OS=Citrus leaf blotch
           virus PE=4 SV=1
          Length = 137

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 19  IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNVSTLTSDP 64


>tr|Q8JXP9|Q8JXP9_9VIRU Polyprotein (Fragment) OS=Citrus leaf blotch
           virus PE=4 SV=1
          Length = 137

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 19  IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNVSTLTSDP 64


>tr|Q8JXP8|Q8JXP8_9VIRU Polyprotein (Fragment) OS=Citrus leaf blotch
           virus PE=4 SV=1
          Length = 137

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 19  IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNVSTLTSDP 64


>tr|Q8JXP7|Q8JXP7_9VIRU Polyprotein (Fragment) OS=Citrus leaf blotch
           virus PE=4 SV=1
          Length = 137

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 19  IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNVSTLTSDP 64


>tr|Q8JXP6|Q8JXP6_9VIRU Polyprotein (Fragment) OS=Citrus leaf blotch
           virus PE=4 SV=1
          Length = 137

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 19  IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNVSTLTSDP 64


>tr|Q8JXP5|Q8JXP5_9VIRU Polyprotein (Fragment) OS=Citrus leaf blotch
           virus PE=4 SV=1
          Length = 137

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 19  IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDP 64


>tr|Q8JXP4|Q8JXP4_9VIRU Polyprotein (Fragment) OS=Citrus leaf blotch
           virus PE=4 SV=1
          Length = 137

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +2

Query: 47  LIVDLLVERKTLYAIHNGFEE*HIV---NHTISIVFSTCKSIDSTP 175
           +I D   E++ +YA+H GFEE H+V   NH + I      ++ S P
Sbjct: 19  IIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDP 64