BP913811 |
Clone id |
YMU001_000035_E12 |
Library |
YMU01 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000035_E12. |
Accession |
BP913811 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTTTGCCGCCAGACTGCGATAGCCCGATATTTTGTGCAATTTCATCAAGCTTCCGCGTCT GCAGCTGTCCACGTCAAGGATAATCCAATATTAACTCTAAGAAACTAATTTTGCCCTCAA CATGTTCACCTCCATCAAATCTTCAAGTTCCCACACACATCTTTCAGCTATCTACCCACA AGGCCCTATCAGCTTAGAATAACCTAATAATCTAATGGAAGGCACCCTCGACTTCAAATC TACTAAGACACTTGCAACTCTAGAGGTATTAAAAATATGCAAGTGAAGGAAAAACCTAAC GTAGGCTTACATTAAAAAAAAGGACAGAGACTCACATGATTCAAAAGGAGCTTCTCAGCT GTTTTCCGAATTTTGGATTGGGCTTGTTCTCTTTGTCTACGCCTGGCAATGACAGTCCTT CTTTTCAAGGCTGGAGTTCCGCCATCAAACACAAAGACAGGTTTTGCTCTAAGATAGAGC AGCTTGCAAATGCGCCGGAAAAAGCCTAGCAAATGAGCATGTCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ATY5 |
Definition |
sp|Q9ATY5|UVH3_ARATH DNA repair protein UVH3 OS=Arabidopsis thaliana |
Align length |
64 |
Score (bit) |
111.0 |
E-value |
2.0e-24 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RVU2 |
Definition |
tr|A9RVU2|A9RVU2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
64 |
Score (bit) |
121.0 |
E-value |
2.0e-26 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913811|Adiantum capillus-veneris mRNA, clone: YMU001_000035_E12. (525 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RVU2|A9RVU2_PHYPA Predicted protein OS=Physcomitrella paten... 121 2e-26 tr|A7PMD6|A7PMD6_VITVI Chromosome chr14 scaffold_21, whole genom... 117 3e-25 tr|Q10Q89|Q10Q89_ORYSJ Os03g0205400 protein OS=Oryza sativa subs... 105 1e-21 tr|B8AQF8|B8AQF8_ORYSI Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|A3AF95|A3AF95_ORYSJ Putative uncharacterized protein OS=Oryza... 105 1e-21 tr|A8IBN5|A8IBN5_CHLRE Predicted protein (Fragment) OS=Chlamydom... 94 5e-18 tr|Q1DNS0|Q1DNS0_COCIM Putative uncharacterized protein OS=Cocci... 83 1e-14 tr|Q54AQ1|Q54AQ1_DICDI Xeroderma pigmentosum group G (XPG) famil... 81 3e-14 tr|Q7SG44|Q7SG44_NEUCR Putative uncharacterized protein OS=Neuro... 80 8e-14 tr|A6R130|A6R130_AJECN Putative uncharacterized protein OS=Ajell... 80 8e-14 tr|A1DMF1|A1DMF1_NEOFI DNA excision repair protein Rad2 OS=Neosa... 79 1e-13 tr|B8MH02|B8MH02_9EURO DNA excision repair protein Rad2 OS=Talar... 78 2e-13 tr|A1CT40|A1CT40_ASPCL DNA excision repair protein Rad2 OS=Asper... 78 2e-13 tr|Q4WN60|Q4WN60_ASPFU DNA excision repair protein Rad2 OS=Asper... 78 3e-13 tr|B0Y7D9|B0Y7D9_ASPFC DNA excision repair protein Rad2 OS=Asper... 78 3e-13 tr|Q5B2L4|Q5B2L4_EMENI Putative uncharacterized protein OS=Emeri... 77 4e-13 tr|B2AY37|B2AY37_PODAN Predicted CDS Pa_1_9750 OS=Podospora anse... 77 4e-13 tr|Q2UPQ8|Q2UPQ8_ASPOR RIB40 genomic DNA, SC005 OS=Aspergillus o... 77 5e-13 tr|Q2HFG9|Q2HFG9_CHAGB Putative uncharacterized protein OS=Chaet... 77 5e-13 tr|Q0CRL0|Q0CRL0_ASPTN Putative uncharacterized protein OS=Asper... 77 5e-13 tr|B8MW93|B8MW93_ASPFL DNA excision repair protein Rad2 OS=Asper... 77 5e-13 tr|B6QLK6|B6QLK6_PENMA DNA excision repair protein Rad2 OS=Penic... 77 5e-13 tr|B6HCI8|B6HCI8_PENCH Pc18g06110 protein OS=Penicillium chrysog... 76 9e-13 tr|A7EV70|A7EV70_SCLS1 Putative uncharacterized protein OS=Scler... 76 9e-13 tr|A6RKP9|A6RKP9_BOTFB Putative uncharacterized protein OS=Botry... 76 9e-13 tr|Q6W7F3|Q6W7F3_CRYPV RAD2 OS=Cryptosporidium parvum PE=4 SV=1 76 1e-12 tr|Q5CQJ7|Q5CQJ7_CRYPV XPG, DNA excision repair protein, flap en... 76 1e-12 tr|Q5CF23|Q5CF23_CRYHO RAD2 OS=Cryptosporidium hominis GN=Chro.4... 76 1e-12 tr|B2WBX7|B2WBX7_PYRTR DNA-repair protein rad13 OS=Pyrenophora t... 76 1e-12 tr|Q6BH44|Q6BH44_DEBHA DEHA2G21494p OS=Debaryomyces hansenii GN=... 75 2e-12
>tr|A9RVU2|A9RVU2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_71061 PE=4 SV=1 Length = 1718
Score = 121 bits (304), Expect = 2e-26 Identities = 59/64 (92%), Positives = 63/64 (98%) Frame = -2
Query: 524 RHAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLL 345 R+AHLLGFFRRICKLL+LR KPVFVFDGGTPALKRRTVIARRRQREQAQS+IRKTAEKLL Sbjct: 51 RNAHLLGFFRRICKLLFLRVKPVFVFDGGTPALKRRTVIARRRQREQAQSRIRKTAEKLL 110
Query: 344 LNHV 333 LNH+ Sbjct: 111 LNHL 114
>tr|A7PMD6|A7PMD6_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020778001 PE=4 SV=1 Length = 1066
Score = 117 bits (294), Expect = 3e-25 Identities = 56/64 (87%), Positives = 61/64 (95%) Frame = -2
Query: 524 RHAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLL 345 R+ HLLGFFRRICKLL+LR KPVFVFDGGTPALKRRTV+ARRRQRE AQ+KIRKTAEKLL Sbjct: 51 RNGHLLGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVVARRRQRENAQAKIRKTAEKLL 110
Query: 344 LNHV 333 LNH+ Sbjct: 111 LNHL 114
>tr|Q10Q89|Q10Q89_ORYSJ Os03g0205400 protein OS=Oryza sativa subsp. japonica GN=Os03g0205400 PE=4 SV=1 Length = 1477
Score = 105 bits (263), Expect = 1e-21 Identities = 50/64 (78%), Positives = 58/64 (90%) Frame = -2
Query: 524 RHAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLL 345 R AHLLGF RRICKLL+LRA+PVFVFDG TPALKRRT+ ARRR R+ AQ+K+RKTAEKLL Sbjct: 51 RDAHLLGFLRRICKLLFLRARPVFVFDGATPALKRRTLAARRRHRDAAQAKVRKTAEKLL 110
Query: 344 LNHV 333 L+H+ Sbjct: 111 LSHL 114
>tr|B8AQF8|B8AQF8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10446 PE=4 SV=1 Length = 1487
Score = 105 bits (263), Expect = 1e-21 Identities = 50/64 (78%), Positives = 58/64 (90%) Frame = -2
Query: 524 RHAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLL 345 R AHLLGF RRICKLL+LRA+PVFVFDG TPALKRRT+ ARRR R+ AQ+K+RKTAEKLL Sbjct: 51 RDAHLLGFLRRICKLLFLRARPVFVFDGATPALKRRTLAARRRHRDAAQAKVRKTAEKLL 110
Query: 344 LNHV 333 L+H+ Sbjct: 111 LSHL 114
>tr|A3AF95|A3AF95_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009467 PE=4 SV=1 Length = 1484
Score = 105 bits (263), Expect = 1e-21 Identities = 50/64 (78%), Positives = 58/64 (90%) Frame = -2
Query: 524 RHAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLL 345 R AHLLGF RRICKLL+LRA+PVFVFDG TPALKRRT+ ARRR R+ AQ+K+RKTAEKLL Sbjct: 51 RDAHLLGFLRRICKLLFLRARPVFVFDGATPALKRRTLAARRRHRDAAQAKVRKTAEKLL 110
Query: 344 LNHV 333 L+H+ Sbjct: 111 LSHL 114
>tr|A8IBN5|A8IBN5_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_96792 PE=4 SV=1 Length = 119
Score = 93.6 bits (231), Expect = 5e-18 Identities = 45/61 (73%), Positives = 52/61 (85%) Frame = -2
Query: 524 RHAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLL 345 R+AHLLGFFRRIC+LL+ R +PVFVFDG TPALKR T IARRR+RE Q +RKTAEKLL Sbjct: 53 RNAHLLGFFRRICRLLFHRVRPVFVFDGATPALKRHTNIARRRRREAQQGVLRKTAEKLL 112
Query: 344 L 342 + Sbjct: 113 I 113
>tr|Q1DNS0|Q1DNS0_COCIM Putative uncharacterized protein OS=Coccidioides immitis GN=CIMG_08043 PE=4 SV=1 Length = 1142
Score = 82.8 bits (203), Expect = 1e-14 Identities = 38/60 (63%), Positives = 48/60 (80%) Frame = -2
Query: 524 RHAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLL 345 R+AH++GFFRRICKLLY KPVFVFDGG PALKR+T+ +R+++RE + KTA KLL Sbjct: 51 RNAHVVGFFRRICKLLYFGIKPVFVFDGGAPALKRQTIASRKKRREGRREDAAKTATKLL 110
>tr|Q54AQ1|Q54AQ1_DICDI Xeroderma pigmentosum group G (XPG) family protein OS=Dictyostelium discoideum GN=DDB_0232365 PE=4 SV=1 Length = 977
Score = 81.3 bits (199), Expect = 3e-14 Identities = 38/60 (63%), Positives = 47/60 (78%) Frame = -2
Query: 521 HAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLLL 342 +A +LGFFRRICKLL LR KP+FVFDGG P LKRRT+ RR++RE+A+ I K +LLL Sbjct: 52 NAPILGFFRRICKLLSLRVKPIFVFDGGVPYLKRRTIEERRKRRERAEQNIEKNQRRLLL 111
>tr|Q7SG44|Q7SG44_NEUCR Putative uncharacterized protein OS=Neurospora crassa GN=NCU07498 PE=4 SV=1 Length = 1269
Score = 79.7 bits (195), Expect = 8e-14 Identities = 38/60 (63%), Positives = 47/60 (78%) Frame = -2
Query: 524 RHAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLL 345 R++H++GFFRRICKLL+ KPVFVFDGG PALKR T+ ARRR+RE + +TA KLL Sbjct: 51 RNSHVVGFFRRICKLLWYGIKPVFVFDGGAPALKRATIQARRRRREGRRDDATRTAGKLL 110
>tr|A6R130|A6R130_AJECN Putative uncharacterized protein OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=HCAG_03337 PE=4 SV=1 Length = 1111
Score = 79.7 bits (195), Expect = 8e-14 Identities = 35/60 (58%), Positives = 48/60 (80%) Frame = -2
Query: 524 RHAHLLGFFRRICKLLYLRAKPVFVFDGGTPALKRRTVIARRRQREQAQSKIRKTAEKLL 345 R+AH++GFF+RICKLLY KPVFVFDGG P LKR+T+++R+++RE + KTA K+L Sbjct: 51 RNAHIVGFFQRICKLLYFGIKPVFVFDGGAPTLKRQTIMSRKQRREGKRENAAKTAGKIL 110
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