BP913813 |
Clone id |
YMU001_000035_F03 |
Library |
YMU01 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000035_F03. |
Accession |
BP913813 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL393Contig1 |
Sequence |
TTGTTTTTTTTTTTTTTTGGCAATAATTCAGATTTATCCGATTCAAGACTACTCTCAGTA CTGTCTTCTGAGGCTCAACGCAGCCAAAGAGAGGAGGAGCATGTCAGGTAACTTACAGGC GAGCTTCTGGAACAATCGACACTACACGACTGTACGCATCCAGTGTGAGGAAGTCGTCCA ATTTTGCAGCTGTACACTGTCGCGCAAACATGCGAGCTGCCTCCACAAACCGGCCTTTCT TGAAGCGCTCTGTTCCAACCTCGCCTTCCACCCTTGCCAGCTCCTCGCCCACCACTCTCG CAAACAGCTCCTTGTCCACCTTGATTGGTACACTCTCCCCATCCAAAACTGCACCATACC TTATCCATTGCCAATTCTGAACCCTGCTAATTTCTGCAGTTGCAGCATCTTCCATAAGGT TATAGAGAGGCACTGACCCCGTGCCGTTGAGCCACGCCTCCACATACTGAATACCAACTC GAGTGTTGAGGCGAAGGCCATCCAATGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P24571 |
Definition |
sp|P24571|MASY_CUCMA Malate synthase, glyoxysomal OS=Cucurbita maxima |
Align length |
123 |
Score (bit) |
191.0 |
E-value |
2.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913813|Adiantum capillus-veneris mRNA, clone: YMU001_000035_F03. (491 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P24571|MASY_CUCMA Malate synthase, glyoxysomal OS=Cucurbita m... 191 2e-48 sp|P45458|MASY_SOYBN Malate synthase, glyoxysomal (Fragment) OS=... 187 2e-47 sp|P49081|MASY_MAIZE Malate synthase, glyoxysomal OS=Zea mays GN... 186 4e-47 sp|P08216|MASY_CUCSA Malate synthase, glyoxysomal OS=Cucumis sat... 186 5e-47 sp|P13244|MASY_BRANA Malate synthase, glyoxysomal OS=Brassica na... 186 5e-47 sp|P17815|MASY_RICCO Malate synthase, glyoxysomal OS=Ricinus com... 184 2e-46 sp|P17432|MASY_GOSHI Malate synthase, glyoxysomal OS=Gossypium h... 175 9e-44 sp|Q43827|MASY_RAPSA Malate synthase, glyoxysomal OS=Raphanus sa... 147 3e-35 sp|P08997|MASY_ECOLI Malate synthase A OS=Escherichia coli (stra... 119 7e-27 sp|P95329|MASY_MYXXD Malate synthase OS=Myxococcus xanthus (stra... 117 2e-26 sp|P21826|MASZ_YEAST Malate synthase 2, glyoxysomal OS=Saccharom... 99 1e-20 sp|Q9ZH77|MASY_STRCL Malate synthase OS=Streptomyces clavuligeru... 99 1e-20 sp|Q10663|GCP_CAEEL Bifunctional glyoxylate cycle protein OS=Cae... 99 1e-20 sp|P30952|MASY_YEAST Malate synthase 1, glyoxysomal OS=Saccharom... 92 2e-18 sp|Q02216|MASY_CANTR Malate synthase, glyoxysomal OS=Candida tro... 90 6e-18 sp|Q8T2K9|MASY_DICDI Malate synthase OS=Dictyostelium discoideum... 89 8e-18 sp|P28344|MASY_EMENI Malate synthase, glyoxysomal OS=Emericella ... 87 3e-17 sp|P28345|MASY_NEUCR Malate synthase, glyoxysomal OS=Neurospora ... 87 5e-17 sp|P77947|MASY_STRAE Malate synthase OS=Streptomyces arenae GN=a... 78 2e-14 sp|P21360|MASY_PICAN Malate synthase, glyoxysomal OS=Pichia angu... 77 4e-14 sp|Q7VT71|MASZ_BORPE Malate synthase G OS=Bordetella pertussis G... 32 1.2 sp|Q7W294|MASZ_BORPA Malate synthase G OS=Bordetella parapertuss... 32 1.2 sp|Q7WR61|MASZ_BORBR Malate synthase G OS=Bordetella bronchisept... 32 1.2 sp|Q8UJ85|MASZ_AGRT5 Malate synthase G OS=Agrobacterium tumefaci... 32 1.6 sp|Q5PGC7|YCCT_SALPA UPF0319 protein yccT OS=Salmonella paratyph... 32 2.0 sp|Q3K5N4|MASZ_PSEPF Malate synthase G OS=Pseudomonas fluorescen... 32 2.0 sp|Q1B860|MASZ_MYCSS Malate synthase G OS=Mycobacterium sp. (str... 32 2.0 sp|A1UGU7|MASZ_MYCSK Malate synthase G OS=Mycobacterium sp. (str... 32 2.0 sp|A3Q0E7|MASZ_MYCSJ Malate synthase G OS=Mycobacterium sp. (str... 32 2.0 sp|P62362|YCCT_SALTY UPF0319 protein yccT OS=Salmonella typhimur... 31 2.7
>sp|P24571|MASY_CUCMA Malate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1 Length = 566
Score = 191 bits (484), Expect = 2e-48 Identities = 89/123 (72%), Positives = 106/123 (86%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLMEDAATAEISRVQNWQWIRYGAVLDGESV 311 TL+GLRLNTRVGIQY+ AWL GTGSVPLYNLMEDAATAEISRVQNWQW++YG LDG+ + Sbjct: 434 TLEGLRLNTRVGIQYLAAWLTGTGSVPLYNLMEDAATAEISRVQNWQWLKYGVELDGDGL 493
Query: 310 PIKVDKELFARVVGEELARVEGEVGTERFKKGRFVEAARMFARQCTAAKLDDFLTLDAYS 131 ++V+KELFARVV EE+ R+E EVG E+F+KG + EA +MF RQCTA LDDFLTLDAY+ Sbjct: 494 GVRVNKELFARVVEEEMERIEREVGKEKFRKGMYKEACKMFTRQCTAPTLDDFLTLDAYN 553
Query: 130 RVV 122 +V Sbjct: 554 HIV 556
>sp|P45458|MASY_SOYBN Malate synthase, glyoxysomal (Fragment) OS=Glycine max PE=2 SV=1 Length = 564
Score = 187 bits (476), Expect = 2e-47 Identities = 87/123 (70%), Positives = 107/123 (86%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLMEDAATAEISRVQNWQWIRYGAVLDGESV 311 T++GLRLNTRVGIQYV AWL G+GSVPLYNLMEDAATAEISRVQNWQW++YG L+G+ + Sbjct: 432 TMEGLRLNTRVGIQYVAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWLKYGVELNGDGL 491
Query: 310 PIKVDKELFARVVGEELARVEGEVGTERFKKGRFVEAARMFARQCTAAKLDDFLTLDAYS 131 +KV+KELF RVV EE+AR+E EVGTE+FK+G + EA ++F RQCT+ LDDFLTLDAY+ Sbjct: 492 GVKVNKELFGRVVEEEMARIEKEVGTEKFKEGMYKEACKIFTRQCTSPMLDDFLTLDAYN 551
Query: 130 RVV 122 +V Sbjct: 552 YIV 554
>sp|P49081|MASY_MAIZE Malate synthase, glyoxysomal OS=Zea mays GN=LIP PE=2 SV=1 Length = 559
Score = 186 bits (473), Expect = 4e-47 Identities = 89/129 (68%), Positives = 107/129 (82%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLMEDAATAEISRVQNWQWIRYGAVLDGESV 311 T+DGLRLN RVG+QY+ AWL G+GSVPLYNLMEDAATAEISRVQNWQW+R+GA LD V Sbjct: 426 TVDGLRLNVRVGVQYLAAWLAGSGSVPLYNLMEDAATAEISRVQNWQWLRHGAALDAGGV 485
Query: 310 PIKVDKELFARVVGEELARVEGEVGTERFKKGRFVEAARMFARQCTAAKLDDFLTLDAYS 131 ++ EL ARVV EE+ARVE EVG +RF+KGR+ EA R+F+RQCTA +LDDFLTLDAY+ Sbjct: 486 EVRATPELLARVVEEEMARVEAEVGPDRFRKGRYAEAGRIFSRQCTAPELDDFLTLDAYN 545
Query: 130 RVVSIVPEA 104 +V+ P A Sbjct: 546 LIVAHHPGA 554
>sp|P08216|MASY_CUCSA Malate synthase, glyoxysomal OS=Cucumis sativus PE=2 SV=2 Length = 568
Score = 186 bits (472), Expect = 5e-47 Identities = 87/123 (70%), Positives = 103/123 (83%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLMEDAATAEISRVQNWQWIRYGAVLDGESV 311 T++GLRLNTRVGIQY+ AWL G GSVPLYNL EDAATAEISRVQNWQW++YG LDG+ + Sbjct: 436 TMEGLRLNTRVGIQYLAAWLTGAGSVPLYNLAEDAATAEISRVQNWQWLKYGVELDGDGL 495
Query: 310 PIKVDKELFARVVGEELARVEGEVGTERFKKGRFVEAARMFARQCTAAKLDDFLTLDAYS 131 ++V+KELF RVV EE+ R+E EVG ERFKKG + EA +MF RQCTA LDDFLTLDAY+ Sbjct: 496 GVRVNKELFGRVVEEEMERIEREVGKERFKKGMYKEACKMFTRQCTAPNLDDFLTLDAYN 555
Query: 130 RVV 122 +V Sbjct: 556 YIV 558
>sp|P13244|MASY_BRANA Malate synthase, glyoxysomal OS=Brassica napus PE=2 SV=1 Length = 561
Score = 186 bits (472), Expect = 5e-47 Identities = 87/127 (68%), Positives = 105/127 (82%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLMEDAATAEISRVQNWQWIRYGAVLDGESV 311 TL+GLRLNTRVGIQY+ AWL G+GSVPLYNLMEDAATAEISRVQNWQWIRYG LDG+ + Sbjct: 429 TLEGLRLNTRVGIQYLAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWIRYGVELDGDGL 488
Query: 310 PIKVDKELFARVVGEELARVEGEVGTERFKKGRFVEAARMFARQCTAAKLDDFLTLDAYS 131 ++V KELF RVV EE+ R+E EVG ++FK+G + EA +MF +QCTAA+LDDFLTL Y Sbjct: 489 GVRVSKELFGRVVEEEMERIEKEVGKDKFKRGMYKEACKMFTKQCTAAELDDFLTLAVYD 548
Query: 130 RVVSIVP 110 +V+ P Sbjct: 549 HIVAHYP 555
>sp|P17815|MASY_RICCO Malate synthase, glyoxysomal OS=Ricinus communis PE=2 SV=1 Length = 567
Score = 184 bits (466), Expect = 2e-46 Identities = 87/128 (67%), Positives = 104/128 (81%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLMEDAATAEISRVQNWQWIRYGAVLDGESV 311 TL+GLRLNTRVGIQY+ AWL GTGSVPLYNLMEDAATAEISRVQNWQW++YG LDG+ + Sbjct: 435 TLEGLRLNTRVGIQYLAAWLTGTGSVPLYNLMEDAATAEISRVQNWQWLKYGVELDGDGL 494
Query: 310 PIKVDKELFARVVGEELARVEGEVGTERFKKGRFVEAARMFARQCTAAKLDDFLTLDAYS 131 +KV +L RVV +E+AR+E EVG E+FKKG + EA +MF RQC A LDDFLTLDAY+ Sbjct: 495 GVKVTFDLLGRVVEDEMARIEREVGKEKFKKGMYKEACKMFVRQCAAPTLDDFLTLDAYN 554
Query: 130 RVVSIVPE 107 +V P+ Sbjct: 555 NIVIHYPK 562
>sp|P17432|MASY_GOSHI Malate synthase, glyoxysomal OS=Gossypium hirsutum PE=2 SV=1 Length = 567
Score = 175 bits (444), Expect = 9e-44 Identities = 83/123 (67%), Positives = 104/123 (84%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLMEDAATAEISRVQNWQWIRYGAVLDGESV 311 T++GLRLNTRVGIQY+ AWL G+GSVPLYNLMEDAATAEISRVQ WQW++YG LDG+ + Sbjct: 435 TMEGLRLNTRVGIQYLAAWLTGSGSVPLYNLMEDAATAEISRVQIWQWLKYGVELDGDGL 494
Query: 310 PIKVDKELFARVVGEELARVEGEVGTERFKKGRFVEAARMFARQCTAAKLDDFLTLDAYS 131 ++V+ +F RVV EE+AR+E EVG E+FKKG + EA ++F RQCTA+ LDDFLTLDAY+ Sbjct: 495 GVRVN-HVFGRVVEEEMARIEREVGKEKFKKGMYKEACKIFTRQCTASTLDDFLTLDAYN 553
Query: 130 RVV 122 +V Sbjct: 554 YIV 556
>sp|Q43827|MASY_RAPSA Malate synthase, glyoxysomal OS=Raphanus sativus GN=MLS PE=2 SV=1 Length = 566
Score = 147 bits (370), Expect = 3e-35 Identities = 80/130 (61%), Positives = 94/130 (72%), Gaps = 3/130 (2%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLM-EDAATAEISRVQNWQWIRYGAVLDGES 314 TLDGLRLNTRVGIQY+ AWL G+GSVPLYNL EDAATAEISRVQNWQWIRYG L + Sbjct: 431 TLDGLRLNTRVGIQYLAAWLTGSGSVPLYNLTDEDAATAEISRVQNWQWIRYGVELKRRT 490
Query: 313 -VPIKVDKELFARVVGEELARVEGEVGTERFKKGRFV-EAARMFARQCTAAKLDDFLTLD 140 + ++V KELF RVV EE+ R+E EVG ER + + + AR TAA+LDDFLTL Sbjct: 491 GLEVRVSKELFGRVVEEEMERIEKEVGKERSLREECIRKLARCLQSSVTAAELDDFLTLA 550
Query: 139 AYSRVVSIVP 110 Y +V+ P Sbjct: 551 VYDHIVAHYP 560
>sp|P08997|MASY_ECOLI Malate synthase A OS=Escherichia coli (strain K12) GN=aceB PE=1 SV=1 Length = 533
Score = 119 bits (298), Expect = 7e-27 Identities = 59/119 (49%), Positives = 79/119 (66%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLMEDAATAEISRVQNWQWIRYGAVLDGESV 311 T +G+R N RV +QY+EAW++G G VP+Y LMEDAATAEISR WQWI + L Sbjct: 414 TEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGK- 472
Query: 310 PIKVDKELFARVVGEELARVEGEVGTERFKKGRFVEAARMFARQCTAAKLDDFLTLDAY 134 V K LF +++GEE+ + E+G ERF +GRF +AAR+ + T+ +L DFLTL Y Sbjct: 473 --PVTKALFRQMLGEEMKVIASELGEERFSQGRFDDAARLMEQITTSDELIDFLTLPGY 529
>sp|P95329|MASY_MYXXD Malate synthase OS=Myxococcus xanthus (strain DK 1622) GN=mls PE=3 SV=2 Length = 541
Score = 117 bits (294), Expect = 2e-26 Identities = 66/120 (55%), Positives = 75/120 (62%), Gaps = 1/120 (0%) Frame = -2
Query: 490 TLDGLRLNTRVGIQYVEAWLNGTGSVPLYNLMEDAATAEISRVQNWQWIRYGAVL-DGES 314 T +GLR N RVGIQY AWL G G VPLYNLMEDAATAEISR Q WQWI +GA L DG Sbjct: 419 TEEGLRHNIRVGIQYTAAWLGGLGCVPLYNLMEDAATAEISRAQVWQWIHHGASLEDGR- 477
Query: 313 VPIKVDKELFARVVGEELARVEGEVGTERFKKGRFVEAARMFARQCTAAKLDDFLTLDAY 134 KV LF +GEE+ R+E E ER+ A +F + TA +DFLTL AY Sbjct: 478 ---KVTLTLFRDALGEEMGRLEKEGAKERYGAAHLERARVLFEQLSTAGTFEDFLTLPAY 534
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5HUP5 |
Definition |
tr|A5HUP5|A5HUP5_IRIHO Malate synthase OS=Iris hollandica |
Align length |
129 |
Score (bit) |
191.0 |
E-value |
2.0e-47 |
Report |
|