BP913823
Clone id YMU001_000035_G02
Library
Length 334
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000035_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGGACTAGTCCTGCAGGTTAAACGAATCGCCCTTGAGATATTACCTGCAGGTACTCTGA
GAACAGTCCTTCATACCCTTCCACAAGGGCGCGTCCTATAGCAAAGCTTGATATCCACAA
AAGAGCATAAGAAAAACTTCAAAGTGTCAAGATCCCTGCCAATAGAAGCGCCAATCTTCA
CGAAACGTCGACAAGTCATCAACAGGGAAATCCTCTTGCCCGAGGACTCGATTGACAGAC
AGACAACACATATCCTCAAACACGATGAAAAGTCCTGCACCTGCTTATCCTGATGTCGGA
TCCGACATACACATCATAGCACCATCTGCCTTCC
■■Homology search results ■■ -
sp_hit_id Q54P47
Definition sp|Q54P47|NDRC_DICDI Probable serine/threonine-protein kinase ndrC OS=Dictyostelium discoideum
Align length 40
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913823|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_G02.
(299 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54P47|NDRC_DICDI Probable serine/threonine-protein kinase nd... 30 2.9
sp|O08715|AKAP1_MOUSE A kinase anchor protein 1, mitochondrial O... 30 3.8
sp|P54571|MLEN_BACSU Malate-2H(+)/Na(+)-lactate antiporter OS=Ba... 29 6.5
sp|Q4P456|SRB8_USTMA Mediator of RNA polymerase II transcription... 29 8.4

>sp|Q54P47|NDRC_DICDI Probable serine/threonine-protein kinase ndrC
OS=Dictyostelium discoideum GN=ndrC PE=3 SV=1
Length = 1335

Score = 30.4 bits (67), Expect = 2.9
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2

Query: 137 QSSRNVDKSSTGKSSCPRTRLTDRQHISSNTMKSPAPAYP 256
QSS++ +++ + S P ++TD QH+ + SP+P+ P
Sbjct: 350 QSSQSTTPTNSSQKSSPN-KVTDHQHVENCNFTSPSPSSP 388


>sp|O08715|AKAP1_MOUSE A kinase anchor protein 1, mitochondrial
OS=Mus musculus GN=Akap1 PE=1 SV=3
Length = 857

Score = 30.0 bits (66), Expect = 3.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2

Query: 134 RQSSRNVDKSSTGKSSCPRTRLTDRQHISSNTMKSPA 244
R+ R+VDK ST + PRTR R+ SS + S A
Sbjct: 75 REEQRSVDKPSTEPLALPRTRQVRRRSESSGNLPSVA 111


>sp|P54571|MLEN_BACSU Malate-2H(+)/Na(+)-lactate antiporter
OS=Bacillus subtilis GN=mleN PE=1 SV=1
Length = 468

Score = 29.3 bits (64), Expect = 6.5
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2

Query: 103 SFSYA-LLWISSFAIGRALVEGYEGLFSEY 17
+FSY +W+S AIG A++ GY G F Y
Sbjct: 427 TFSYLPFMWLSFVAIGLAIIYGYTGKFIWY 456


>sp|Q4P456|SRB8_USTMA Mediator of RNA polymerase II transcription
subunit 12 OS=Ustilago maydis GN=SRB8 PE=3 SV=1
Length = 1876

Score = 28.9 bits (63), Expect = 8.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1

Query: 10 PAGTLRTVLHTLPQGRVL*QSLISTKEHKKNFKVSRSLPI---EAPIFTKRRQVI 165
P+ + T H P G V S +S + ++ RSLP+ A ++ +RRQ I
Sbjct: 715 PSASSATEQHQNPDGSVQTPSSVSASRDSLHLRLLRSLPLYDQPASVYQQRRQAI 769


tr_hit_id B4N4F2
Definition tr|B4N4F2|B4N4F2_DROWI GK10728 OS=Drosophila willistoni
Align length 77
Score (bit) 34.3
E-value 3.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913823|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_G02.
(299 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4N4F2|B4N4F2_DROWI GK10728 OS=Drosophila willistoni GN=GK107... 34 3.1
tr|A0YZ80|A0YZ80_9CYAN Beta-Ig-H3/fasciclin OS=Lyngbya sp. PCC 8... 34 4.1

>tr|B4N4F2|B4N4F2_DROWI GK10728 OS=Drosophila willistoni GN=GK10728
PE=4 SV=1
Length = 2553

Score = 34.3 bits (77), Expect = 3.1
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +2

Query: 26 EQSFIPFHKGASYSKA*YPQKSIRKTSKCQDPCQ*KRQSSRNVDKSSTGKSSCPRTRLTD 205
+Q+ + + +++ P K K SK Q Q K +++ +K S GKSS +T+L
Sbjct: 1317 KQAIVNEQRSEKQTQSSEPDKDAEKESKQQRRGQVK--ATKEKEKVSGGKSSEEKTKLKT 1374

Query: 206 RQHISSNTMKSPAPAYP 256
+++NT+ +P P P
Sbjct: 1375 ATTMATNTIATPIPTTP 1391


>tr|A0YZ80|A0YZ80_9CYAN Beta-Ig-H3/fasciclin OS=Lyngbya sp. PCC 8106
GN=L8106_03759 PE=4 SV=1
Length = 133

Score = 33.9 bits (76), Expect = 4.1
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Frame = +1

Query: 7 LPAGTLRTVLHTLPQ-GRVL*QSLISTKEHKKNFKVSRSL-PIEAP----IFTKRRQVIN 168
LP GT++T++ +PQ R+L ++S K K + + ++L IE IFT+ +V N
Sbjct: 49 LPPGTIQTLVQNIPQLARILTYHVVSGKLMKADLEQLQTLTSIEGSPLPLIFTEGFEVKN 108

Query: 169 REILLPEDSIDRQTTHIL 222
++ P+ D H++
Sbjct: 109 ASVVAPDIEADNGVIHVI 126