NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913825
Clone id YMU001_000035_G05
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000035_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AACAGATGAGAAGTTGGCAGGCAAGGTTCGAAATAATAAAGCAGGAATAGTTTAACAATA
GTCTGCCAACTTTCGCCAAATGAATTATTTCCAGTTGTAGGGTGGTGGATCTATGTAGAT
CACTGCTCCAGCTCTAAACTCTGAGGAGTGAGAACAGAACAGCATTTATTACTCGCTGAG
CCAATGACACGAGAGTTTTGACAAAGAATTAACAAGCAAAGTCTTGGATATATACAAATC
TCAAAAGATATGCTGTTGTTGATTGGTTAGTTGATTTGGGTGTGTGCGTACCTAAAGCAC
ATCACAAAATAATATGCTGTTATCCATGTTTTATACAGACAATGGCTTGGATCCTTGACG
AGTATTCCAAATTTCATGGGCACTCTCCAGCAATTGTAACAGGAAAACCCTTGGTTAGTT
TACGCATTCAGTATATGTTCACGCACAGGTGCTGATA
■■Homology search results ■■ -
sp_hit_id O04937
Definition sp|O04937|DHEA_NICPL Glutamate dehydrogenase A OS=Nicotiana plumbaginifolia
Align length 26
Score (bit) 58.9
E-value 1.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913825|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_G05.
         (457 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O04937|DHEA_NICPL Glutamate dehydrogenase A OS=Nicotiana plum...    59   1e-08
sp|P52596|DHE3_VITVI Glutamate dehydrogenase OS=Vitis vinifera G...    59   1e-08
sp|Q9S7A0|DHE3_ARATH Probable glutamate dehydrogenase 3 OS=Arabi...    59   1e-08
sp|Q38946|DHE2_ARATH Glutamate dehydrogenase 2 OS=Arabidopsis th...    59   1e-08
sp|Q9LEC8|DHEB_NICPL Glutamate dehydrogenase B OS=Nicotiana plum...    56   6e-08
sp|Q43314|DHE1_ARATH Glutamate dehydrogenase 1 OS=Arabidopsis th...    56   6e-08
sp|P93541|DHE3_SOLLC Glutamate dehydrogenase OS=Solanum lycopers...    56   8e-08
sp|Q43260|DHE3_MAIZE Glutamate dehydrogenase OS=Zea mays GN=GDH1...    56   8e-08
sp|P50735|GUDB_BACSU NAD-specific glutamate dehydrogenase OS=Bac...    36   0.069
sp|P39633|DHE2_BACSU NAD-specific glutamate dehydrogenase OS=Bac...    36   0.090
sp|P29051|DHE41_HALSA NAD-specific glutamate dehydrogenase A OS=...    35   0.15 
sp|Q9HSM4|DHE42_HALSA NADP-specific glutamate dehydrogenase B OS...    35   0.20 
sp|Q7A1B9|DHE2_STAAW NAD-specific glutamate dehydrogenase OS=Sta...    34   0.26 
sp|Q6GAW8|DHE2_STAAS NAD-specific glutamate dehydrogenase OS=Sta...    34   0.26 
sp|Q6GID0|DHE2_STAAR NAD-specific glutamate dehydrogenase OS=Sta...    34   0.26 
sp|Q7A6H8|DHE2_STAAN NAD-specific glutamate dehydrogenase OS=Sta...    34   0.26 
sp|Q99VD0|DHE2_STAAM NAD-specific glutamate dehydrogenase OS=Sta...    34   0.26 
sp|Q5HHC7|DHE2_STAAC NAD-specific glutamate dehydrogenase OS=Sta...    34   0.26 
sp|P39475|DHE4_SULSH NADP-specific glutamate dehydrogenase (Frag...    33   0.76 
sp|P80053|DHE2_SULSO Glutamate dehydrogenase 2 OS=Sulfolobus sol...    33   0.76 
sp|P27346|DHE2_CLODI NAD-specific glutamate dehydrogenase OS=Clo...    32   0.99 
sp|Q2JWB4|NDHI_SYNJA NAD(P)H-quinone oxidoreductase subunit I OS...    32   1.7  
sp|Q9C8J8|WBC13_ARATH White-brown complex homolog protein 13 OS=...    32   1.7  
sp|Q9NRR4|RNC_HUMAN Ribonuclease 3 OS=Homo sapiens GN=RNASEN PE=...    30   4.9  
sp|P54386|DHE4_SYNY3 NADP-specific glutamate dehydrogenase OS=Sy...    30   4.9  
sp|Q54KB7|DHE3_DICDI Glutamate dehydrogenase, mitochondrial OS=D...    30   6.4  
sp|Q9YC65|DHE3_AERPE Glutamate dehydrogenase OS=Aeropyrum pernix...    30   6.4  

>sp|O04937|DHEA_NICPL Glutamate dehydrogenase A OS=Nicotiana
           plumbaginifolia GN=GDHA PE=2 SV=1
          Length = 411

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPAIVTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAIVTGKPI 173


>sp|P52596|DHE3_VITVI Glutamate dehydrogenase OS=Vitis vinifera
           GN=GDH PE=2 SV=1
          Length = 411

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPI 173


>sp|Q9S7A0|DHE3_ARATH Probable glutamate dehydrogenase 3
           OS=Arabidopsis thaliana GN=GSH3 PE=1 SV=1
          Length = 411

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPI 173


>sp|Q38946|DHE2_ARATH Glutamate dehydrogenase 2 OS=Arabidopsis
           thaliana GN=GDH2 PE=1 SV=1
          Length = 411

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPI 173


>sp|Q9LEC8|DHEB_NICPL Glutamate dehydrogenase B OS=Nicotiana
           plumbaginifolia GN=GDHB PE=2 SV=1
          Length = 411

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHG+SPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGYSPAVVTGKPI 173


>sp|Q43314|DHE1_ARATH Glutamate dehydrogenase 1 OS=Arabidopsis
           thaliana GN=GDH1 PE=1 SV=1
          Length = 411

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHG+SPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGYSPAVVTGKPI 173


>sp|P93541|DHE3_SOLLC Glutamate dehydrogenase OS=Solanum
           lycopersicum GN=GDH1 PE=2 SV=1
          Length = 412

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHG+SPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGYSPAVVTGKPV 173


>sp|Q43260|DHE3_MAIZE Glutamate dehydrogenase OS=Zea mays GN=GDH1
           PE=1 SV=1
          Length = 411

 Score = 55.8 bits (133), Expect = 8e-08
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHG+SPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGYSPAVVTGKPV 173


>sp|P50735|GUDB_BACSU NAD-specific glutamate dehydrogenase
           OS=Bacillus subtilis GN=gudB PE=1 SV=1
          Length = 426

 Score = 36.2 bits (82), Expect = 0.069
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 QTMAWILDEYSKF-HGHSPAIVTGKPLV 416
           Q MAW++DEYS+    +SP  +TGKPLV
Sbjct: 164 QIMAWMMDEYSRIDEFNSPGFITGKPLV 191


>sp|P39633|DHE2_BACSU NAD-specific glutamate dehydrogenase
           OS=Bacillus subtilis GN=rocG PE=1 SV=2
          Length = 424

 Score = 35.8 bits (81), Expect = 0.090
 Identities = 16/28 (57%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHG-HSPAIVTGKPLV 416
           Q MAW++DEYS+     SP  +TGKPLV
Sbjct: 162 QIMAWMMDEYSRLREFDSPGFITGKPLV 189
tr_hit_id Q7XN06
Definition tr|Q7XN06|Q7XN06_ORYSJ OSJNBb0038F03.5 protein OS=Oryza sativa subsp. japonica
Align length 29
Score (bit) 63.2
E-value 6.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913825|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_G05.
         (457 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7XN06|Q7XN06_ORYSJ OSJNBb0038F03.5 protein OS=Oryza sativa s...    63   6e-09
tr|Q67C43|Q67C43_TOBAC Glutamate dehydrogenase alpha subunit (Fr...    59   1e-07
tr|Q9FES0|Q9FES0_VITVI NADH glutamate dehydrogenase (Putative un...    59   2e-07
tr|Q94IA5|Q94IA5_BRANA Glutamate dehydrogenase (Glutamate dehydr...    59   2e-07
tr|Q94F14|Q94F14_ARATH Glutamate dehydrogenase 2 OS=Arabidopsis ...    59   2e-07
tr|Q6V8N7|Q6V8N7_MALDO NADH glutamate dehydrogenase (Fragment) O...    59   2e-07
tr|Q6V8M4|Q6V8M4_MALDO Glutamate dehydrogenase (Fragment) OS=Mal...    59   2e-07
tr|Q6H3Y7|Q6H3Y7_ORYSJ Os02g0650900 protein OS=Oryza sativa subs...    59   2e-07
tr|Q5QDM6|Q5QDM6_LUPLU Glutamate dehydrogenase 1 OS=Lupinus lute...    59   2e-07
tr|Q5F2M8|Q5F2M8_SOYBN Glutamate dehydrogenase 2 OS=Glycine max ...    59   2e-07
tr|Q5BU42|Q5BU42_LUPLU Glutamate dehydrogenase 2 (Fragment) OS=L...    59   2e-07
tr|Q33E23|Q33E23_ORYSJ Os04g0543900 protein OS=Oryza sativa subs...    59   2e-07
tr|B7STY6|B7STY6_CAMSI GDH2 OS=Camellia sinensis PE=2 SV=1             59   2e-07
tr|A3AW21|A3AW21_ORYSJ Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|A2XW22|A2XW22_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|A2X7V1|A2X7V1_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|B4FFP2|B4FFP2_MAIZE Putative uncharacterized protein OS=Zea m...    57   4e-07
tr|A7PBH4|A7PBH4_VITVI Chromosome chr16 scaffold_10, whole genom...    57   5e-07
tr|A5BSM5|A5BSM5_VITVI Putative uncharacterized protein OS=Vitis...    57   5e-07
tr|A7YVW4|A7YVW4_ACTCH GDH2 OS=Actinidia chinensis GN=GDH2 PE=2 ...    57   6e-07
tr|Q9ZRZ0|Q9ZRZ0_ASPOF Glutamate dehydrogenase OS=Asparagus offi...    56   8e-07
tr|Q94AA6|Q94AA6_ARATH AT5g18170/MRG7_13 OS=Arabidopsis thaliana...    56   8e-07
tr|Q8L6A0|Q8L6A0_TOBAC Glutamate dehydrogenase OS=Nicotiana taba...    56   8e-07
tr|Q67C42|Q67C42_TOBAC Glutamate dehydrogenase beta subunit (Fra...    56   8e-07
tr|Q66LL3|Q66LL3_BRANA Putative glutamate dehydrogenase 1 protei...    56   8e-07
tr|Q5F2M9|Q5F2M9_SOYBN Glutamate dehydrogenase 1 OS=Glycine max ...    56   8e-07
tr|Q5BU44|Q5BU44_LUPLU Glutamate dehydrogenase (Fragment) OS=Lup...    56   8e-07
tr|Q50JE9|Q50JE9_BRAOL Glutamate dehydrogenase (Fragment) OS=Bra...    56   8e-07
tr|Q1H5A3|Q1H5A3_ARATH At5g18170 OS=Arabidopsis thaliana PE=2 SV=1     56   8e-07
tr|A9NXM5|A9NXM5_PICSI Putative uncharacterized protein OS=Picea...    56   8e-07

>tr|Q7XN06|Q7XN06_ORYSJ OSJNBb0038F03.5 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBb0038F03.5 PE=3 SV=1
          Length = 412

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 27/29 (93%), Positives = 29/29 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPLVSL 422
           QTMAWILDEYSKFHGHSPA+VTGKP+VSL
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPIVSL 176


>tr|Q67C43|Q67C43_TOBAC Glutamate dehydrogenase alpha subunit
           (Fragment) OS=Nicotiana tabacum GN=gdh1 PE=2 SV=1
          Length = 295

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 25/26 (96%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPAIVTGKP+
Sbjct: 83  QTMAWILDEYSKFHGHSPAIVTGKPI 108


>tr|Q9FES0|Q9FES0_VITVI NADH glutamate dehydrogenase (Putative
           uncharacterized protein) (Chromosome chr16 scaffold_10,
           whole genome shotgun sequence) OS=Vitis vinifera GN=gdhA
           PE=3 SV=1
          Length = 411

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPI 173


>tr|Q94IA5|Q94IA5_BRANA Glutamate dehydrogenase (Glutamate
           dehydrogenase 2) OS=Brassica napus GN=gdh2 PE=2 SV=1
          Length = 411

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPI 173


>tr|Q94F14|Q94F14_ARATH Glutamate dehydrogenase 2 OS=Arabidopsis
           thaliana GN=T2I1_150 PE=2 SV=1
          Length = 228

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPI 173


>tr|Q6V8N7|Q6V8N7_MALDO NADH glutamate dehydrogenase (Fragment)
           OS=Malus domestica PE=2 SV=1
          Length = 106

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 13  QTMAWILDEYSKFHGHSPAVVTGKPI 38


>tr|Q6V8M4|Q6V8M4_MALDO Glutamate dehydrogenase (Fragment) OS=Malus
           domestica PE=2 SV=1
          Length = 106

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 13  QTMAWILDEYSKFHGHSPAVVTGKPI 38


>tr|Q6H3Y7|Q6H3Y7_ORYSJ Os02g0650900 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0012J10.18 PE=2 SV=1
          Length = 411

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPI 173


>tr|Q5QDM6|Q5QDM6_LUPLU Glutamate dehydrogenase 1 OS=Lupinus luteus
           GN=GDH1 PE=2 SV=1
          Length = 411

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPI 173


>tr|Q5F2M8|Q5F2M8_SOYBN Glutamate dehydrogenase 2 OS=Glycine max
           GN=gdh2 PE=2 SV=1
          Length = 412

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 336 QTMAWILDEYSKFHGHSPAIVTGKPL 413
           QTMAWILDEYSKFHGHSPA+VTGKP+
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPI 173