BP913837
Clone id YMU001_000035_H09
Library
Length 529
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000035_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGTAGGGGTGATCTTGATGACTGATATGATGAATTTAGTGCATCAAGAATCTGTTAGA
GATCAATGAGATTTGGCTGTGCTAACTAGATGAATCAATTTACAATTATGTCTGAGGTCT
TGCTCGGGACAGCAATGCGAATGTGATCCTAATGCATCAACAGTGCTATCTCGATGAGAT
GATTGGATACTGATCTTTGTGCATCAAAAGTTGGGAAAAGATGGGATGACTGGATAGTGA
GCTTGGTGCATCAATAGTTCCATATTGGATGAGATAACTCCCTTGATTGTTTACATCTGA
GTATTCAGTGTAAACTATACAAATGCAGAATGTTATCTGAAATCCATAGTGGATTAGAAT
ATATGCAGATCAAAGTGAAAAAGTACGTAGTGTACAGTACGAATTCAGCACGTAACGTAC
ACACTTCTGTACTGATAAAATGTTAAGGTACATATCAGTACGTACCATTTTTTGAAAGAT
TGAAGTATAGATTAATTCAACATTTTCACAAACATATTAGACTGAAATG
■■Homology search results ■■ -
sp_hit_id Q9LVP9
Definition sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana
Align length 40
Score (bit) 30.0
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913837|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_H09.
(529 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13 OS=Arabidopsi... 30 7.1
sp|Q8TGB2|GPI7_CANAL GPI ethanolamine phosphate transferase 2 OS... 30 7.2
sp|Q16281|CNGA3_HUMAN Cyclic nucleotide-gated cation channel alp... 30 9.2

>sp|Q9LVP9|VTI13_ARATH Vesicle transport v-SNARE 13 OS=Arabidopsis
thaliana GN=VTI13 PE=2 SV=1
Length = 221

Score = 30.0 bits (66), Expect = 7.1
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3

Query: 321 KCRMLSEIHSGLEYMQIKVKKYVVYSTNSARNVHTSVLIK 440
K + LSEI SG+E + VKK + + N NV +S+L+K
Sbjct: 34 KKQNLSEIKSGVEEAEALVKKMDLEARNLPPNVKSSLLVK 73


>sp|Q8TGB2|GPI7_CANAL GPI ethanolamine phosphate transferase 2
OS=Candida albicans GN=LAS21 PE=3 SV=2
Length = 892

Score = 30.0 bits (66), Expect = 7.2
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = -1

Query: 424 VCTLRAEFVLYTTYFFTLICIYSNPLWISDNILHLYSLH*ILRCKQSRELSHPIWNY*CT 245
V T+ A V++ YFFT+ + + + + + LYSLH E H IW + T
Sbjct: 422 VITVLAVIVVFNRYFFTVSNMNISSVMFYELFVVLYSLH--FHGSSLIEEEHQIWYFFTT 479

Query: 244 KLTIQSSHLFPTFDAQRSVSNHL 176
+ + F FD +S+ N +
Sbjct: 480 ATLLFLAITF--FDTFKSLQNFI 500


>sp|Q16281|CNGA3_HUMAN Cyclic nucleotide-gated cation channel
alpha-3 OS=Homo sapiens GN=CNGA3 PE=1 SV=2
Length = 694

Score = 29.6 bits (65), Expect = 9.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3

Query: 521 SNMFVKMLN*SILQSFKKWYVLICTLTFYQYRSVYV 414
SN++ + L L F WY+LIC F + +S Y+
Sbjct: 165 SNLYYRWLTAIALPVFYNWYLLICRACFDELQSEYL 200


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913837|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_H09.
(529 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******