BP913839
Clone id YMU001_000035_H11
Library
Length 431
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000035_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTGAGTACGCCCACTTTCCCATGACTTTGAGTCACTTTCTTTTTGGATGACACTAGGTAT
GGCTAAGGGTCTATGGACTTGGTGAGGCTGTTGTTGCGTAGGGAACACGATGTCTGTAAG
CTAGATCTTCCTAGATGCTGGTTCTAGATCCCTTTGGGTATCTTCTACCAAACTCCTTAA
TTGCTTGACTCGCTCAATCTCCTCTGTAGGGTTTGGATAAGTTCCTATCATCTTCTTGGA
TCCTGGCCATTGTGGCTCATGAGGATCTTCCTTGTTGGTTTCTATCTTAGTGGTCATTTT
GGTCTCCATGGTTTCTCCTGTATCAAAATCCTCTTCAACGTCATTCATATATACAGGGGT
CGTTACCAATCCCTATGTTGGTCTTTGAGCTGGGTTCTGACTTCGCTCTTTTTGCGATCT
CTTTCTTCGTA
■■Homology search results ■■ -
sp_hit_id Q21802
Definition sp|Q21802|YEYC_CAEEL UPF0392 protein R07B7.12 OS=Caenorhabditis elegans
Align length 48
Score (bit) 32.0
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913839|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_H11.
(431 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q21802|YEYC_CAEEL UPF0392 protein R07B7.12 OS=Caenorhabditis ... 32 1.1
sp|Q9NHE5|CAPS_DROME Calcium-dependent secretion activator OS=Dr... 31 1.9
sp|Q13585|MTR1L_HUMAN Melatonin-related receptor OS=Homo sapiens... 30 3.2
sp|Q28558|MTR1L_SHEEP Melatonin-related receptor OS=Ovis aries G... 30 5.5
sp|Q9V3C5|RIC1_DROME Protein RIC1 homolog OS=Drosophila melanoga... 29 9.3
sp|P29529|OLEO_HELAN Oleosin (Fragment) OS=Helianthus annuus PE=... 29 9.3

>sp|Q21802|YEYC_CAEEL UPF0392 protein R07B7.12 OS=Caenorhabditis
elegans GN=R07B7.12 PE=2 SV=1
Length = 550

Score = 32.0 bits (71), Expect = 1.1
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1

Query: 211 VWISSYHLLGSWPLWLMRIFLVGFYLSGHFGLHGFSCIKILFNVIHIY 354
+ IS + W L+LM I ++ Y GH ++ S ++ LFNV+ IY
Sbjct: 206 ICISPQFVAEKWQLFLMNIHVIRRY-GGHMHIYITSMVEKLFNVLKIY 252


>sp|Q9NHE5|CAPS_DROME Calcium-dependent secretion activator
OS=Drosophila melanogaster GN=Caps PE=1 SV=2
Length = 1436

Score = 31.2 bits (69), Expect = 1.9
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = -1

Query: 161 IPKGI*NQHLGRSSLQTSCSLRNNSLTKSIDP*PYLVSSKKKVTQSHGK 15
IP GI + L Q+ S R NSL + + P P L S K + + HGK
Sbjct: 112 IPSGISQETLN----QSVGSSRANSLPRPLSPSPSLTSEKHETAEPHGK 156


>sp|Q13585|MTR1L_HUMAN Melatonin-related receptor OS=Homo sapiens
GN=GPR50 PE=2 SV=1
Length = 613

Score = 30.4 bits (67), Expect = 3.2
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1

Query: 235 LGSWPLWLMRIFLVGFYLSGHFGLHGFSCIKILFNVIHIYRGRYQSLCWSLSW 393
+G W L ++ +VGF + G S + +FN++ I RY +C SL +
Sbjct: 91 IGGWDLSQLQCQMVGF-------ITGLSVVGSIFNIVAIAINRYCYICHSLQY 136


>sp|Q28558|MTR1L_SHEEP Melatonin-related receptor OS=Ovis aries
GN=GPR50 PE=2 SV=2
Length = 575

Score = 29.6 bits (65), Expect = 5.5
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1

Query: 235 LGSWPLWLMRIFLVGFYLSGHFGLHGFSCIKILFNVIHIYRGRYQSLCWSLSW 393
+G W L ++ +VGF + G S + +FN++ I RY +C SL +
Sbjct: 91 IGGWDLSKLQCQMVGF-------ITGLSVVGSIFNIMAIAINRYCYICHSLQY 136


>sp|Q9V3C5|RIC1_DROME Protein RIC1 homolog OS=Drosophila
melanogaster GN=CG9063 PE=1 SV=1
Length = 1429

Score = 28.9 bits (63), Expect = 9.3
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -3

Query: 207 TEEIERVKQLRSLVEDTQRDLE-PASRKI*LTDIVFPTQQQPHQVHR 70
T+ E ++ + +E + DLE PA I L DI F QQQP Q R
Sbjct: 160 TQSCELLRLQWTELEHAENDLELPALSSIKLRDIPFYVQQQPQQSAR 206


>sp|P29529|OLEO_HELAN Oleosin (Fragment) OS=Helianthus annuus PE=2
SV=1
Length = 181

Score = 28.9 bits (63), Expect = 9.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1

Query: 271 LVGFYLSGHFGLHGFSCIKILFNVI 345
+ GF SG FGL G S + LFN++
Sbjct: 89 VTGFLASGTFGLTGLSSLSYLFNMV 113


tr_hit_id B8Y3J4
Definition tr|B8Y3J4|B8Y3J4_9STRA Chitin synthase 1 OS=Thalassiosira rotula
Align length 72
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913839|Adiantum capillus-veneris mRNA, clone:
YMU001_000035_H11.
(431 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8Y3J4|B8Y3J4_9STRA Chitin synthase 1 OS=Thalassiosira rotula... 33 9.3
tr|B4H0D9|B4H0D9_DROPE GL14878 OS=Drosophila persimilis GN=GL148... 33 9.3

>tr|B8Y3J4|B8Y3J4_9STRA Chitin synthase 1 OS=Thalassiosira rotula
PE=2 SV=1
Length = 1191

Score = 32.7 bits (73), Expect = 9.3
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = -3

Query: 204 EEIERVKQLRSLVEDTQRDLEPASRKI*LTDIVFPTQQQPHQVHRPLA-----IPSVIQK 40
EE+ERVK+ + +E+ Q+ + S+ P Q P+ H P+A +P+++Q+
Sbjct: 90 EELERVKEEKRKLEEQQQRSQRRSQ---------PPQATPYHNHSPVASSKLNLPTIVQR 140

Query: 39 ESDSKSWESGRT 4
+S S R+
Sbjct: 141 DSSDNRSVSSRS 152


>tr|B4H0D9|B4H0D9_DROPE GL14878 OS=Drosophila persimilis GN=GL14878
PE=4 SV=1
Length = 1339

Score = 32.7 bits (73), Expect = 9.3
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = -3

Query: 243 GSKKMIGTYPNPTEEIERVKQLRSLVEDTQRDLEPASRKI*LTDIVFPTQQQPHQVHRP 67
G KK IG PN + V L S+ +DTQ+ +PA R IV+P+ H P
Sbjct: 475 GQKKNIGRDPNMRSPMATVALLDSMTDDTQKTQKPAPRM--PLAIVYPSAAVKAVFHTP 531