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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913852
Clone id YMU001_000037_B02
Library
Length 493
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000037_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTTTTAAACAAATTTTGTGAGCTCTTTGTATCACATCTGCTAGTA
CAATGGGTGATAGCAATGGTGTACAAAATCCCTTCGCAAGAAAGGGAGTTACCCTTTGTA
AGAGAGGGAGTTACCCCAAGCTCGTTTTCCAGTGCTCGATCGAGGGTGCACTCCAAAAGA
GCGATTAATCTCCCAAAGTAGCATTCAGAACATTGAGGATGCAGACCTGGGCATGCTGGG
AGCCTTGGTCTTCCTATCATCCTCTATAGAGATCATACCAAGGTGAGACGGGTCCTCGAG
CATCATTTTAGCCACAAGGTAGCCCGCAATAGACCAAGTTTGATGTTTCCTGGCCTGCTT
ACCAATATACCTACCAAACGTACCATCATAGTACTCTGGCCAATGGTCCTTGGAAAGCCT
GCTTTCCAAAAGTTCCATGGCTTTCCTCGCCATATGCGGTCTGCCTGTTTTGATGCAAGC
TGCTGTGAAAAGC
■■Homology search results ■■ -
sp_hit_id Q7Z417
Definition sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental retardation-interacting protein 2 OS=Homo sapiens
Align length 58
Score (bit) 33.5
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913852|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_B02.
         (473 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental retardation-inter...    33   0.49 
sp|Q5F2E7|NUFP2_MOUSE Nuclear fragile X mental retardation-inter...    33   0.84 
sp|P00358|G3P2_YEAST Glyceraldehyde-3-phosphate dehydrogenase 2 ...    30   5.4  
sp|Q01RP2|PLSX_SOLUE Fatty acid/phospholipid synthesis protein p...    30   7.1  
sp|Q6IWH7|ANO7_HUMAN Anoctamin-7 OS=Homo sapiens GN=ANO7 PE=1 SV=1     29   9.3  

>sp|Q7Z417|NUFP2_HUMAN Nuclear fragile X mental
           retardation-interacting protein 2 OS=Homo sapiens
           GN=NUFIP2 PE=1 SV=1
          Length = 695

 Score = 33.5 bits (75), Expect = 0.49
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +3

Query: 87  SYPL*ERELPQARFPVLDRGCTPKERLIS--QSSIQNIEDADLGMLGALVFLSSSIEI 254
           +Y L +R  PQ    +L  G T +   +S   S I +++ AD    GALVFLS   EI
Sbjct: 564 AYELEKRTSPQVLGSILKSGTTSESGALSLEPSHIGDLQKADTSSQGALVFLSKDYEI 621


>sp|Q5F2E7|NUFP2_MOUSE Nuclear fragile X mental
           retardation-interacting protein 2 OS=Mus musculus
           GN=Nufip2 PE=1 SV=1
          Length = 692

 Score = 32.7 bits (73), Expect = 0.84
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +3

Query: 87  SYPL*ERELPQARFPVLDRGCTPKERL-ISQSSIQNIEDADLGMLGALVFLSSSIEI 254
           +Y L +R  PQ    +L  G T    L +  S I +++ AD    GALVFLS   EI
Sbjct: 562 AYELEKRTSPQVLGHILKPGTTESGALSLDPSHIGDLQKADTSSQGALVFLSKDYEI 618


>sp|P00358|G3P2_YEAST Glyceraldehyde-3-phosphate dehydrogenase 2
           OS=Saccharomyces cerevisiae GN=TDH2 PE=1 SV=3
          Length = 332

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 370 YDGTFGRYIGKQARKHQTWSIAGYLVAKMMLEDPSHLGMISIEDD 236
           YD T GRY G+ +   +   + G+ +A     DP++L   S+  D
Sbjct: 47  YDSTHGRYAGEVSHDDKHIIVDGHKIATFQERDPANLPWASLNID 91


>sp|Q01RP2|PLSX_SOLUE Fatty acid/phospholipid synthesis protein plsX
           OS=Solibacter usitatus (strain Ellin6076) GN=plsX PE=3
           SV=1
          Length = 337

 Score = 29.6 bits (65), Expect = 7.1
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 215 AGSLGLPIILYRDHTKVRRVLEHHFSHK 298
           AGSLG+ +IL      VRR LE H  H+
Sbjct: 26  AGSLGVKVILVGQQDVVRRELEQHEGHR 53


>sp|Q6IWH7|ANO7_HUMAN Anoctamin-7 OS=Homo sapiens GN=ANO7 PE=1 SV=1
          Length = 933

 Score = 29.3 bits (64), Expect = 9.3
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 169 SPKVAFRTLRMQTWACWEPWSSYHPL--*RSYQGE 267
           +P++  R +  Q WA W  W+ Y PL   R Y GE
Sbjct: 307 APRLNQRQVLFQHWARWGKWNKYQPLDHVRRYFGE 341
tr_hit_id A9RWA7
Definition tr|A9RWA7|A9RWA7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 92
Score (bit) 147.0
E-value 3.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913852|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_B02.
         (473 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RWA7|A9RWA7_PHYPA Predicted protein OS=Physcomitrella paten...   147   3e-34
tr|A9TLV6|A9TLV6_PHYPA Predicted protein OS=Physcomitrella paten...   146   4e-34
tr|Q1HGA2|Q1HGA2_9ROSI Neutral invertase 5 (Fragment) OS=Populus...   146   6e-34
tr|A9TV85|A9TV85_PHYPA Predicted protein OS=Physcomitrella paten...   146   6e-34
tr|Q684K1|Q684K1_LOTJA Putative neutral/alkaline invertase OS=Lo...   145   8e-34
tr|Q101R9|Q101R9_NICLS Neutral invertase (Fragment) OS=Nicotiana...   145   8e-34
tr|A9IVV1|A9IVV1_VITVI Putative neutral invertase OS=Vitis vinif...   145   8e-34
tr|A9IVT9|A9IVT9_VITVI Putative neutral invertase OS=Vitis vinif...   145   8e-34
tr|A7P844|A7P844_VITVI Chromosome chr3 scaffold_8, whole genome ...   145   8e-34
tr|A7Q7F4|A7Q7F4_VITVI Chromosome chr18 scaffold_59, whole genom...   145   1e-33
tr|A9TGS7|A9TGS7_PHYPA Predicted protein OS=Physcomitrella paten...   144   2e-33
tr|A7NSV5|A7NSV5_VITVI Chromosome chr18 scaffold_1, whole genome...   144   2e-33
tr|A5H9U4|A5H9U4_SOLLC Beta-fructofuranosidase (Fragment) OS=Sol...   143   4e-33
tr|Q9M0P2|Q9M0P2_ARATH Neutral invertase like protein OS=Arabido...   142   6e-33
tr|Q69T31|Q69T31_ORYSJ Os02g0550600 protein OS=Oryza sativa subs...   142   6e-33
tr|Q67XD9|Q67XD9_ARATH Neutral invertase like protein OS=Arabido...   142   6e-33
tr|Q56UL5|Q56UL5_ORYSI Neutral/alkaline invertase 8 (Fragment) O...   142   6e-33
tr|A2X5Y2|A2X5Y2_ORYSI Putative uncharacterized protein OS=Oryza...   142   6e-33
tr|Q9SW48|Q9SW48_ARATH AT4g34860/F11I11_100 OS=Arabidopsis thali...   142   8e-33
tr|Q9LQF2|Q9LQF2_ARATH F15O4.33 OS=Arabidopsis thaliana GN=At1g3...   141   1e-32
tr|Q7XQN9|Q7XQN9_ORYSA OSJNBa0084A10.16 protein OS=Oryza sativa ...   141   2e-32
tr|Q1WLP5|Q1WLP5_MANES Neutral/alkaline invertase OS=Manihot esc...   141   2e-32
tr|Q0JD43|Q0JD43_ORYSJ Os04g0432400 protein OS=Oryza sativa subs...   141   2e-32
tr|B8ATZ8|B8ATZ8_ORYSI Putative uncharacterized protein OS=Oryza...   141   2e-32
tr|Q8L9K0|Q8L9K0_ARATH Putative invertase OS=Arabidopsis thalian...   140   2e-32
tr|B4F9D4|B4F9D4_MAIZE Putative uncharacterized protein OS=Zea m...   140   3e-32
tr|Q53PH5|Q53PH5_ORYSJ Neutral/alkaline invertase, putative, exp...   139   5e-32
tr|B8B1D5|B8B1D5_ORYSI Putative uncharacterized protein OS=Oryza...   139   5e-32
tr|B8A2U9|B8A2U9_MAIZE Putative uncharacterized protein OS=Zea m...   139   7e-32
tr|B4FP50|B4FP50_MAIZE Putative uncharacterized protein OS=Zea m...   139   7e-32

>tr|A9RWA7|A9RWA7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_206206 PE=4 SV=1
          Length = 467

 Score =  147 bits (371), Expect = 3e-34
 Identities = 68/92 (73%), Positives = 79/92 (85%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           + TAACIK GRP +AR+A+E +E+RLS D WPEYYDG  GRY+GKQARK QTWSIAGYLV
Sbjct: 373 MLTAACIKAGRPQIARRAIEQVETRLSADGWPEYYDGKLGRYVGKQARKFQTWSIAGYLV 432

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSAS 197
           AKMMLEDPSHLGMI +E+DRK + PS+ RSAS
Sbjct: 433 AKMMLEDPSHLGMIGLEEDRKIQKPSLTRSAS 464


>tr|A9TLV6|A9TLV6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_223503 PE=4 SV=1
          Length = 466

 Score =  146 bits (369), Expect = 4e-34
 Identities = 69/92 (75%), Positives = 81/92 (88%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           + TAACIKTGRP +AR+A+E +E+RL+KD WPEYYDG  GRY+GKQARK QTWSIAGYLV
Sbjct: 373 MLTAACIKTGRPQIARRAIEQVETRLAKDGWPEYYDGKLGRYVGKQARKFQTWSIAGYLV 432

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSAS 197
           AKMMLEDPSHLGMI +E+D+K K PS+ RSAS
Sbjct: 433 AKMMLEDPSHLGMIGLEEDKKMK-PSLTRSAS 463


>tr|Q1HGA2|Q1HGA2_9ROSI Neutral invertase 5 (Fragment) OS=Populus
           sp. UG-2006 PE=2 SV=1
          Length = 263

 Score =  146 bits (368), Expect = 6e-34
 Identities = 70/92 (76%), Positives = 81/92 (88%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           L TAACIKTGRP +ARKA++L E+RL KD WPEYYDG  GRY+GKQARK+QTWSIAGYLV
Sbjct: 170 LLTAACIKTGRPQIARKAIDLAETRLLKDGWPEYYDGKLGRYVGKQARKYQTWSIAGYLV 229

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSAS 197
           AKMMLEDPSHLGMIS+E+DR+ K P + RS+S
Sbjct: 230 AKMMLEDPSHLGMISLEEDRQMK-PVLRRSSS 260


>tr|A9TV85|A9TV85_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_151230 PE=4 SV=1
          Length = 537

 Score =  146 bits (368), Expect = 6e-34
 Identities = 67/92 (72%), Positives = 79/92 (85%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           + TAACIK GRP +AR+A+E +E+RLS D WPEYYDG  GRY+GKQARK QTWSIAGYLV
Sbjct: 443 MLTAACIKAGRPQIARRAIEQVETRLSADGWPEYYDGKLGRYVGKQARKFQTWSIAGYLV 502

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSAS 197
           AKMMLEDPSHLGMI +E+D+K + PS+ RSAS
Sbjct: 503 AKMMLEDPSHLGMIGLEEDKKIQKPSLTRSAS 534


>tr|Q684K1|Q684K1_LOTJA Putative neutral/alkaline invertase OS=Lotus
           japonicus GN=inv1 PE=2 SV=1
          Length = 556

 Score =  145 bits (367), Expect = 8e-34
 Identities = 70/92 (76%), Positives = 81/92 (88%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           L TAACIKTGRP +AR+A+EL ESRL KD WPEYYDG  GRY+GKQARK+QTWSIAGYLV
Sbjct: 463 LVTAACIKTGRPQIARRAIELAESRLLKDGWPEYYDGKLGRYVGKQARKYQTWSIAGYLV 522

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSAS 197
           AKMMLEDPSHLGMIS+E+D++ K P + RS+S
Sbjct: 523 AKMMLEDPSHLGMISLEEDKQMK-PVIKRSSS 553


>tr|Q101R9|Q101R9_NICLS Neutral invertase (Fragment) OS=Nicotiana
           langsdorffii x Nicotiana sanderae GN=INV1 PE=2 SV=1
          Length = 175

 Score =  145 bits (367), Expect = 8e-34
 Identities = 70/92 (76%), Positives = 82/92 (89%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           L TAACIKTGRP +AR+A++L ESRLSKD WPEYYDG  GRYIGKQARK+QTWSIAGYLV
Sbjct: 82  LLTAACIKTGRPQIARRAIDLAESRLSKDVWPEYYDGKVGRYIGKQARKYQTWSIAGYLV 141

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSAS 197
           AKM+LEDPSHLGMI++E+D++ K P + RSAS
Sbjct: 142 AKMLLEDPSHLGMIALEEDKQMK-PVIKRSAS 172


>tr|A9IVV1|A9IVV1_VITVI Putative neutral invertase OS=Vitis vinifera
           GN=ni1 PE=4 SV=1
          Length = 573

 Score =  145 bits (367), Expect = 8e-34
 Identities = 71/95 (74%), Positives = 81/95 (85%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           L TAACIKTGRP +AR+A+EL ESRL KD WPEYYDG  GR+IGKQARK QTWS+AGYLV
Sbjct: 480 LLTAACIKTGRPQIARRAIELAESRLVKDSWPEYYDGKLGRFIGKQARKFQTWSVAGYLV 539

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSASSMF 188
           AKMMLEDPSHLGMIS+E+D++ K P + RSAS  F
Sbjct: 540 AKMMLEDPSHLGMISLEEDKQMK-PLIKRSASWTF 573


>tr|A9IVT9|A9IVT9_VITVI Putative neutral invertase OS=Vitis vinifera
           GN=ni1 PE=4 SV=1
          Length = 573

 Score =  145 bits (367), Expect = 8e-34
 Identities = 71/95 (74%), Positives = 81/95 (85%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           L TAACIKTGRP +AR+A+EL ESRL KD WPEYYDG  GR+IGKQARK QTWS+AGYLV
Sbjct: 480 LLTAACIKTGRPQIARRAIELAESRLVKDSWPEYYDGKLGRFIGKQARKFQTWSVAGYLV 539

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSASSMF 188
           AKMMLEDPSHLGMIS+E+D++ K P + RSAS  F
Sbjct: 540 AKMMLEDPSHLGMISLEEDKQMK-PLIKRSASWTF 573


>tr|A7P844|A7P844_VITVI Chromosome chr3 scaffold_8, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00036029001
           PE=4 SV=1
          Length = 561

 Score =  145 bits (367), Expect = 8e-34
 Identities = 71/95 (74%), Positives = 81/95 (85%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           L TAACIKTGRP +AR+A+EL ESRL KD WPEYYDG  GR+IGKQARK QTWS+AGYLV
Sbjct: 468 LLTAACIKTGRPQIARRAIELAESRLVKDSWPEYYDGKLGRFIGKQARKFQTWSVAGYLV 527

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSASSMF 188
           AKMMLEDPSHLGMIS+E+D++ K P + RSAS  F
Sbjct: 528 AKMMLEDPSHLGMISLEEDKQMK-PLIKRSASWTF 561


>tr|A7Q7F4|A7Q7F4_VITVI Chromosome chr18 scaffold_59, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00031814001
           PE=4 SV=1
          Length = 556

 Score =  145 bits (366), Expect = 1e-33
 Identities = 69/92 (75%), Positives = 81/92 (88%)
 Frame = -2

Query: 472 LFTAACIKTGRPHMARKAMELLESRLSKDHWPEYYDGTFGRYIGKQARKHQTWSIAGYLV 293
           L TAACIKTGRP +AR+A++L ESRL KD WPEYYDG  GRY+GKQARK+QTWSIAGYLV
Sbjct: 463 LLTAACIKTGRPQIARRAIDLAESRLLKDSWPEYYDGKLGRYVGKQARKYQTWSIAGYLV 522

Query: 292 AKMMLEDPSHLGMISIEDDRKTKAPSMPRSAS 197
           AKM+LEDPSHLGMIS+E+DR+ K P + RS+S
Sbjct: 523 AKMLLEDPSHLGMISLEEDRQMK-PLIKRSSS 553