BP913856 |
Clone id |
YMU001_000037_B06 |
Library |
YMU01 |
Length |
518 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000037_B06. |
Accession |
BP913856 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1332Contig1 |
Sequence |
CGCTGATCCATTGGTAGTGCTGCCTGGACACCCTTCAGCATTTCAGCATCAAAACTATTC AAGTTCTGACTTCTGCTATTTTCTAAAGTATCCCATTGAGAGTTCTCTGAATGCCCATCA CCAGTTGCCGCAAAAGAGATATCACTTCCTCGAGCAGAACTCATTTCACTAGCAATACTC TCAATTGAGAGCTTCCGCTCATGGCCACTTCTACCTTCCTCCACTACAGAACTAACAGGC CGTAACTTCTGCCCAAATGTTAACTTCGCATCCTTAAAAGAAAAATTTTCCTGCAAATCA GATGCATTTTCTTTTATATCACTTTCAATAGCATCAAGCTCACGGTTGAGAAGCTCCTGT TGGCCAGTTCCTGTAGACTCCTCAAGATCATCTATCTCAAAATCTACACCAGCTTTGGAA GTCCCACTCAAAATCTCTGGAACATATAAATCACAGCTCGCATCACTTCCTTGCTCTGTT TCTGAAGTGACTGACGTGCCTGAGGAGGCACCTGTCAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q4FQB4 |
Definition |
sp|Q4FQB4|SYR_PSYA2 Arginyl-tRNA synthetase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) |
Align length |
73 |
Score (bit) |
37.0 |
E-value |
0.052 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SSC4 |
Definition |
tr|A9SSC4|A9SSC4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
76 |
Score (bit) |
38.1 |
E-value |
0.24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913856|Adiantum capillus-veneris mRNA, clone: YMU001_000037_B06. (504 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SSC4|A9SSC4_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.24 tr|A1ED53|A1ED53_CANMA N-alkane responsive element-binding prote... 36 1.2 tr|Q5HBB0|Q5HBB0_EHRRW Chaperone protein HscA OS=Ehrlichia rumin... 35 2.0 tr|Q5FGS8|Q5FGS8_EHRRG Chaperone protein hscA homolog OS=Ehrlich... 35 2.0 tr|A7UTI4|A7UTI4_ANOGA AGAP004995-PA OS=Anopheles gambiae GN=AGA... 35 2.6 tr|Q5NFQ5|Q5NFQ5_FRATT DNA-methyltransferase, type I restriction... 34 3.4 tr|Q14H57|Q14H57_FRAT1 DNA-methyltransferase, type I restriction... 34 3.4 tr|B2SGB3|B2SGB3_FRATM Type I restriction-modification system, M... 34 3.4 tr|A4IYK5|A4IYK5_FRATW N-6 DNA Methylase family OS=Francisella t... 34 3.4 tr|A7JD34|A7JD34_FRATT Putative uncharacterized protein OS=Franc... 34 3.4 tr|Q5I6L8|Q5I6L8_SOLTU Potato late blight resistance protein R3a... 34 3.5 tr|Q51316|Q51316_9NOSO SsDNA replicating plasmid encoding a repl... 34 4.5 tr|A4BF53|A4BF53_9GAMM DNA-directed RNA polymerase OS=Reinekea s... 34 4.5 tr|B3RF70|B3RF70_SORAR Apolipoprotein A-IV (Predicted) OS=Sorex ... 34 4.5 tr|A2EPC5|A2EPC5_TRIVA Ankyrin repeat protein, putative OS=Trich... 33 5.8 tr|B0SPG6|B0SPG6_LEPBP Putative uncharacterized protein OS=Lepto... 33 7.6 tr|B0SFW5|B0SFW5_LEPBA Peptidase inhibitor-like protein OS=Lepto... 33 7.6 tr|A8SRR2|A8SRR2_9FIRM Putative uncharacterized protein OS=Copro... 33 7.6 tr|A8SRB4|A8SRB4_9FIRM Putative uncharacterized protein OS=Copro... 33 7.6 tr|Q3STE8|Q3STE8_NITWN Gene transfer agent (GTA) orfg15, like pr... 33 9.9 tr|A9KHV6|A9KHV6_CLOPH Methyl-accepting chemotaxis sensory trans... 33 9.9 tr|A9DX90|A9DX90_9FLAO Phospholipid/glycerol acyltransferase OS=... 33 9.9 tr|B6SWK8|B6SWK8_MAIZE MLO-like protein 14 OS=Zea mays PE=2 SV=1 33 9.9 tr|B4FT97|B4FT97_MAIZE Putative uncharacterized protein OS=Zea m... 33 9.9 tr|B3LWX9|B3LWX9_DROAN GF18668 OS=Drosophila ananassae GN=GF1866... 33 9.9 tr|A8PVE0|A8PVE0_BRUMA Myosin tail family protein OS=Brugia mala... 33 9.9 tr|B8ML59|B8ML59_9EURO Putative uncharacterized protein OS=Talar... 33 9.9 tr|B8ML58|B8ML58_9EURO Putative uncharacterized protein OS=Talar... 33 9.9
>tr|A9SSC4|A9SSC4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_233998 PE=4 SV=1 Length = 1520
Score = 38.1 bits (87), Expect = 0.24 Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = -2
Query: 500 GTSVTSETEQGSDASCDLYVPEILSGTSKAGVDFEIDDLEESTGTGQQELLNRELDAIE- 324 GT+ TS+ + A+CD E+LS T ++ L STG + LN EL E Sbjct: 209 GTNATSQEDVLGSANCDAKQSEVLSATKSVDNSSSVESL-SSTGVLK---LNSELSCTET 264
Query: 323 -SDIKENASDLQENFS 279 SD E S LQ N+S Sbjct: 265 DSDACEGCSSLQANYS 280
>tr|A1ED53|A1ED53_CANMA N-alkane responsive element-binding protein OS=Candida maltosa GN=NDT80 PE=4 SV=1 Length = 648
Score = 35.8 bits (81), Expect = 1.2 Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 25/154 (16%) Frame = +2
Query: 83 LKYPIESSLNAHHQLPQKRYHFLEQNSFH*QYSQLRASAHGHFYLPPLQN*QAVTSAQM- 259 +++P +SS+ H Q++ +Q+ Q+ Q + + H + P +Q QA Q Sbjct: 35 IQHPYQSSVYDQHHHQQQQQQGQQQHHQQQQHQQHQQAVHHPVHYPGIQQGQAQAQQQQQ 94
Query: 260 ----LTSHP*KKNFPANQ------MH-----------FLLYHFQ*HQAHG*EAPVGQFL* 376 T HP N ANQ +H L H+ Q H + + L Sbjct: 95 QLPHFTMHP-TNNLAANQHLTHSQLHTPQPYQQSAAGIQLSHYNGQQLH--QQQLHHQLL 151
Query: 377 TP---QDHLSQNLHQLWKSHSKSLEHINHSSHHF 469 TP Q H Q Q + H + H +H HF Sbjct: 152 TPNPYQQHFQQQQQQQQQLHPQLQHHEDHLGMHF 185
>tr|Q5HBB0|Q5HBB0_EHRRW Chaperone protein HscA OS=Ehrlichia ruminantium (strain Welgevonden) GN=hscA PE=3 SV=1 Length = 616
Score = 35.0 bits (79), Expect = 2.0 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 9/76 (11%) Frame = -2
Query: 443 VPEILSGTSKAGVDFEID--------DLEESTGTGQQELLNRELDAIESDIKENASDLQE 288 +P + +G++K V+F++D E+ TG Q +N L + +I+EN + + Sbjct: 460 IPPLPAGSAKIQVEFQVDMDGLLTVSAQEKLTGIKQSVSINNTLKLDQKEIEENVMESVK 519
Query: 287 NF-SFKDAKLTFGQKL 243 NF S DA+L QK+ Sbjct: 520 NFNSDMDARLLAEQKI 535
>tr|Q5FGS8|Q5FGS8_EHRRG Chaperone protein hscA homolog OS=Ehrlichia ruminantium (strain Gardel) GN=hscA PE=3 SV=1 Length = 616
Score = 35.0 bits (79), Expect = 2.0 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 9/76 (11%) Frame = -2
Query: 443 VPEILSGTSKAGVDFEID--------DLEESTGTGQQELLNRELDAIESDIKENASDLQE 288 +P + +G++K V+F++D E+ TG Q +N L + +I+EN + + Sbjct: 460 IPPLPAGSAKIQVEFQVDMDGLLTVSAQEKLTGIKQSVSINNTLKLDQKEIEENVMESVK 519
Query: 287 NF-SFKDAKLTFGQKL 243 NF S DA+L QK+ Sbjct: 520 NFNSDMDARLLAEQKI 535
>tr|A7UTI4|A7UTI4_ANOGA AGAP004995-PA OS=Anopheles gambiae GN=AGAP004995 PE=4 SV=1 Length = 587
Score = 34.7 bits (78), Expect = 2.6 Identities = 41/147 (27%), Positives = 55/147 (37%), Gaps = 7/147 (4%) Frame = +2
Query: 47 HQNYSSSDF--CYFLKYPIESSLNAHHQLPQKRYHFLEQNSFH*QYSQLRASAHGHFYLP 220 HQN+ SD C+ SS N + +FL N Y+ A+AHGH Sbjct: 186 HQNHMHSDVTSCH------ASSNNNSNATNNGSNNFLSNNGSG--YTHSIATAHGHANQH 237
Query: 221 PLQN*QAVT-----SAQMLTSHP*KKNFPANQMHFLLYHFQ*HQAHG*EAPVGQFL*TPQ 385 L A T S Q+LT+HP ++ Q H +H Q Q Q Sbjct: 238 NLNGYLAGTNGSGSSLQLLTNHPPQQQQQQQQQHQPQHH-QPQQLQ------------QQ 284
Query: 386 DHLSQNLHQLWKSHSKSLEHINHSSHH 466 Q HQL +H + +H HH Sbjct: 285 QQQQQQHHQLQHTHLQHQQHQQQQHHH 311
>tr|Q5NFQ5|Q5NFQ5_FRATT DNA-methyltransferase, type I restriction-modification enzyme subunit M OS=Francisella tularensis subsp. tularensis GN=hsdM PE=4 SV=1 Length = 488
Score = 34.3 bits (77), Expect = 3.4 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = -2
Query: 410 GVDFEIDDLEESTGTGQQELLNREL-------DAIESDIKENASDLQENFSFKDAKLTFG 252 G D ++D + TG E++N+EL +I+ D+K + F F D ++ G Sbjct: 79 GADGKLDVINADTGDDLLEIVNKELFPYLKSFKSIDEDVKSLKYKIGAIFEFLDNRIASG 138
Query: 251 QKLRPVSSVVEE 216 LR V + ++E Sbjct: 139 HTLRDVINEIDE 150
>tr|Q14H57|Q14H57_FRAT1 DNA-methyltransferase, type I restriction-modification enzyme subunit M OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=hsdM PE=4 SV=1 Length = 488
Score = 34.3 bits (77), Expect = 3.4 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = -2
Query: 410 GVDFEIDDLEESTGTGQQELLNREL-------DAIESDIKENASDLQENFSFKDAKLTFG 252 G D ++D + TG E++N+EL +I+ D+K + F F D ++ G Sbjct: 79 GADGKLDVINADTGDDLLEIVNKELFPYLKSFKSIDEDVKSLKYKIGAIFEFLDNRIASG 138
Query: 251 QKLRPVSSVVEE 216 LR V + ++E Sbjct: 139 HTLRDVINEIDE 150
>tr|B2SGB3|B2SGB3_FRATM Type I restriction-modification system, M subunit OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=FTM_0817 PE=4 SV=1 Length = 482
Score = 34.3 bits (77), Expect = 3.4 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = -2
Query: 410 GVDFEIDDLEESTGTGQQELLNREL-------DAIESDIKENASDLQENFSFKDAKLTFG 252 G D ++D + TG E++N+EL +I+ D+K + F F D ++ G Sbjct: 73 GADGKLDVINADTGDDLLEIVNKELFPYLKSFKSIDEDVKSLKYKIGAIFEFLDNRIASG 132
Query: 251 QKLRPVSSVVEE 216 LR V + ++E Sbjct: 133 HTLRDVINEIDE 144
>tr|A4IYK5|A4IYK5_FRATW N-6 DNA Methylase family OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=FTW_1214 PE=4 SV=1 Length = 482
Score = 34.3 bits (77), Expect = 3.4 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = -2
Query: 410 GVDFEIDDLEESTGTGQQELLNREL-------DAIESDIKENASDLQENFSFKDAKLTFG 252 G D ++D + TG E++N+EL +I+ D+K + F F D ++ G Sbjct: 73 GADGKLDVINADTGDDLLEIVNKELFPYLKSFKSIDEDVKSLKYKIGAIFEFLDNRIASG 132
Query: 251 QKLRPVSSVVEE 216 LR V + ++E Sbjct: 133 HTLRDVINEIDE 144
>tr|A7JD34|A7JD34_FRATT Putative uncharacterized protein OS=Francisella tularensis subsp. tularensis FSC033 GN=FTBG_00529 PE=4 SV=1 Length = 487
Score = 34.3 bits (77), Expect = 3.4 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%) Frame = -2
Query: 410 GVDFEIDDLEESTGTGQQELLNREL-------DAIESDIKENASDLQENFSFKDAKLTFG 252 G D ++D + TG E++N+EL +I+ D+K + F F D ++ G Sbjct: 78 GADGKLDVINADTGDDLLEIVNKELFPYLKSFKSIDEDVKSLKYKIGAIFEFLDNRIASG 137
Query: 251 QKLRPVSSVVEE 216 LR V + ++E Sbjct: 138 HTLRDVINEIDE 149
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