BP913862
Clone id YMU001_000037_B12
Library
Length 178
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000037_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGGGCACGAACTCTGCTAAGCACAGAGGTAAAGTGGCGTGCGCGGCCTTGCTTTCGTGAA
ATTGCGACCACGGTATTGTGAAGAGAGGCTTTCCAAACAGCGCGACCTACCTTCTGGGCG
GGATCGGAGTTACCCGTGTCGAGGCAGATCTCATCAAAGCGATACAAAGAGGGGCCTT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913862|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_B12.
(178 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q70KR1
Definition tr|Q70KR1|Q70KR1_LOTJA Nod-factor receptor 5 OS=Lotus japonicus
Align length 56
Score (bit) 37.0
E-value 0.48
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913862|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_B12.
(178 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q70KR1|Q70KR1_LOTJA Nod-factor receptor 5 OS=Lotus japonicus ... 37 0.48
tr|A9U5R6|A9U5R6_PHYPA Predicted protein OS=Physcomitrella paten... 33 5.4

>tr|Q70KR1|Q70KR1_LOTJA Nod-factor receptor 5 OS=Lotus japonicus
GN=nfr5 PE=2 SV=1
Length = 595

Score = 37.0 bits (84), Expect = 0.48
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = -3

Query: 173 PSLYRFDEICLDTGNSDPAQKVGRAVWKASLHNTVVAISR-KQGRARHFTSVLSRV 9
P++Y DEI T + KVG +V+KA++ VVA+ + K+G A +L +V
Sbjct: 301 PNVYEIDEIMEATKDFSDECKVGESVYKANIEGRVVAVKKIKEGGANEELKILQKV 356


>tr|A9U5R6|A9U5R6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_157257 PE=4 SV=1
Length = 322

Score = 33.5 bits (75), Expect = 5.4
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = -3

Query: 176 GPSLYRFDEICLDTGNSDPAQKVGRAVWKASLHNTVVAI 60
GP +++F ++C T N +KVG V++ +L T +AI
Sbjct: 5 GPIIFQFRDLCKATDNFSALKKVGTTVYRGNLQKTDMAI 43