NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913864
Clone id YMU001_000037_C02
Library
Length 475
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000037_C02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTTTTAAGAGACGAATCACGTCCGTGTATCAGTCTAAGCCGCCACT
TCCTACCCCTCCTTCTTCTCTATCCCGTAAGACTATTCTTTGAGTACCGCATTGGGGCGA
GACCCAATATCTTCTTTGCCGCCCCACCCTTGGTTTGGAGAGGGGAAAATAGAAAAGGTG
GGACTTACGACCTTACCTATCTATGGAAACTCCATAGAATGATAAGAGAGACTCTTAGTA
GTCAACAATCCCAGGATTTACATTCCATTTTTACGGATTGGTACTAGGGAATATTAAATT
TCCCAAGGATTTCCTTTTCTTTTGATAGATTTAGCTTCGGGGGACACCGAAGCAACAGGA
CCCACCCGCATCTCGATACGAAGATCGGTTTCGTCGCCACTTAGTTCGGAGGGGCAAGGA
GATTGACCAAATCAAACTTTCCCGCCCGGGTTCTTTTTGCTTTCTCTTGGTGGAA
■■Homology search results ■■ -
sp_hit_id Q9ASY9
Definition sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Arabidopsis thaliana
Align length 46
Score (bit) 32.7
E-value 0.76
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913864|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_C02.
         (456 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Ara...    33   0.76 
sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin...    30   4.9  
sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus ma...    30   6.4  
sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobac...    29   8.4  

>sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog
           OS=Arabidopsis thaliana GN=At3g16990 PE=1 SV=2
          Length = 221

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = -3

Query: 382 SGDETDLRIEMRVGPVASVSPEAKSIKRKGNPWEI*YS-LVPIRKN 248
           SG+ +D+  E+ +G +AS++ E +  KR+G+ W++ +S +VP R N
Sbjct: 69  SGESSDM--EVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRAN 112


>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing
           protein YALI0D16379g OS=Yarrowia lipolytica
           GN=YALI0D16379g PE=3 SV=1
          Length = 818

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 137 WRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSI 250
           WR EN K G YD   + KL +M+R+     Q++DL +I
Sbjct: 292 WR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328


>sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus
           marinus (strain MIT 9215) GN=cobQ PE=3 SV=2
          Length = 509

 Score = 29.6 bits (65), Expect = 6.4
 Identities = 27/84 (32%), Positives = 36/84 (42%)
 Frame = +2

Query: 107 NIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GILNFP 286
           N  F    L W  EN KGGT   TY   +H +      S + Q ++ I       ILN  
Sbjct: 425 NPIFEDLDLGWFKENNKGGTIAGTY---IHGIFEN--DSWREQYINLIRKSKNLPILNKK 479

Query: 287 RISFSFDRFSFGGHRSNRTHPHLD 358
            IS+   R S   + +N  H HL+
Sbjct: 480 SISYKKKRESIIDNLANEFHKHLN 503


>sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobacter
           crescentus GN=fliI PE=3 SV=2
          Length = 444

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = -3

Query: 412 FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAK 311
           FGQ P P+E+ G      + M  GPV  V P A+
Sbjct: 48  FGQKPLPAEVVGFRETRALLMPFGPVEGVGPGAE 81
tr_hit_id A1CQJ5
Definition tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Aspergillus clavatus
Align length 70
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913864|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_C02.
         (456 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Asper...    35   1.4  

>tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein
           OS=Aspergillus clavatus GN=ACLA_026330 PE=4 SV=1
          Length = 577

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +2

Query: 95  GARPNIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GI 274
           G+RP + FA  P+  +G N  G  Y L Y W+L   +  + +     D+  I+  W  G+
Sbjct: 168 GSRPQLLFAVLPIADKGANFSGKHYVLCYDWRLRTFLARSFNWLPG-DIRDIWAVWSEGL 226

Query: 275 ----LNFPRI 292
               +  PR+
Sbjct: 227 TVYTITIPRL 236