BP913870 |
Clone id |
YMU001_000037_C08 |
Library |
YMU01 |
Length |
450 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000037_C08. |
Accession |
BP913870 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCCAGAGCATGCTATACTGTTAACAATCATTATTTTGGCCACTTCCTCTTGTACATGAAG CCTCGCTTGGTTAGCAGGCATGTCTGGCCTGTCCATGGAACCTACAAACACAGAAACAAA CTGGTACAAACTGCAGAACCTCTCTGCAAAGGTGTTGGAAAGCTGGTCTACCTCATTCTC CACTATCACCATGATCTTCGGGTTGCATGTGCAAAGCATCCTAAGAACCATGTCACGCGG GCTTTCCCCGCCATATTTACTGCCTCTGATTGGAACACACTGTAAGGTTTGGTTCAAGTT GACAACAAGTGCTTCCCCTAGCCCCACATCTAAAGACTGTGCATCAATCTTTTCCAATGT GGGGTCATATATGACCTTAAATTTGAAAGAAGGGAGCCCCATCAAGTGCGCAAACCTTGT AATCTTGTTGCTAATGGCTTTCATAGCCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9S7H5 |
Definition |
sp|Q9S7H5|SCL21_ARATH Scarecrow-like protein 21 OS=Arabidopsis thaliana |
Align length |
145 |
Score (bit) |
63.2 |
E-value |
5.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SN65 |
Definition |
tr|A9SN65|A9SN65_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
152 |
Score (bit) |
90.1 |
E-value |
5.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913870|Adiantum capillus-veneris mRNA, clone: YMU001_000037_C08. (450 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SN65|A9SN65_PHYPA Predicted protein (Fragment) OS=Physcomit... 90 5e-17 tr|A9RBV3|A9RBV3_PHYPA Predicted protein (Fragment) OS=Physcomit... 80 4e-14 tr|B4XI11|B4XI11_PINRA Short-root OS=Pinus radiata GN=SHR PE=2 SV=1 78 2e-13 tr|A7QB46|A7QB46_VITVI Chromosome chr4 scaffold_73, whole genome... 64 3e-09 tr|A5ASP1|A5ASP1_VITVI Putative uncharacterized protein OS=Vitis... 64 3e-09 tr|A7NSM0|A7NSM0_VITVI Chromosome chr18 scaffold_1, whole genome... 64 4e-09 tr|A5AZP2|A5AZP2_VITVI Putative uncharacterized protein OS=Vitis... 64 4e-09 tr|A5HJS4|A5HJS4_9POAL Scarecrow OS=Aeluropus littoralis PE=4 SV=1 63 6e-09 tr|A9U324|A9U324_PHYPA PAL1B encoding AtPAT1-like protein OS=Phy... 62 2e-08 tr|Q8RZQ6|Q8RZQ6_ORYSJ cDNA clone:001-034-C07, full insert seque... 60 5e-08 tr|A3A085|A3A085_ORYSJ Putative uncharacterized protein OS=Oryza... 60 5e-08 tr|A9TWF6|A9TWF6_PHYPA PAL1A AtPAT1-like protein OS=Physcomitrel... 59 2e-07 tr|A8R3J0|A8R3J0_IPONI Putative SHORT-ROOT protein OS=Ipomoea ni... 59 2e-07 tr|Q00LP3|Q00LP3_SOLLC GRAS6 OS=Solanum lycopersicum GN=GRAS6 PE... 58 2e-07 tr|A7R5W4|A7R5W4_VITVI Chromosome undetermined scaffold_1084, wh... 58 3e-07 tr|A7P114|A7P114_VITVI Chromosome chr19 scaffold_4, whole genome... 58 3e-07 tr|A5AQ59|A5AQ59_VITVI Putative uncharacterized protein OS=Vitis... 58 3e-07 tr|B6SVG7|B6SVG7_MAIZE Chitin-inducible gibberellin-responsive p... 57 4e-07 tr|B4FXY2|B4FXY2_MAIZE Putative uncharacterized protein OS=Zea m... 57 4e-07 tr|Q00LP6|Q00LP6_SOLLC GRAS2 OS=Solanum lycopersicum GN=GRAS2 PE... 57 5e-07 tr|Q0D544|Q0D544_ORYSJ Os07g0583600 protein OS=Oryza sativa subs... 57 6e-07 tr|A2Z6I1|A2Z6I1_ORYSI Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|A2YN28|A2YN28_ORYSI Putative uncharacterized protein OS=Oryza... 57 6e-07 tr|Q8S5N0|Q8S5N0_ORYSJ Putative SCARECROW gene regulator-like (P... 56 8e-07 tr|Q339D4|Q339D4_ORYSJ Chitin-inducible gibberellin-responsive p... 56 8e-07 tr|Q10QK3|Q10QK3_ORYSJ Os03g0193000 protein OS=Oryza sativa subs... 55 1e-06 tr|B8AQ19|B8AQ19_ORYSI Putative uncharacterized protein OS=Oryza... 55 1e-06 tr|A5BK38|A5BK38_VITVI Putative uncharacterized protein OS=Vitis... 55 1e-06 tr|A3AF14|A3AF14_ORYSJ Putative uncharacterized protein OS=Oryza... 55 1e-06 tr|A9RYV4|A9RYV4_PHYPA Predicted protein OS=Physcomitrella paten... 55 2e-06
>tr|A9SN65|A9SN65_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_14911 PE=4 SV=1 Length = 372
Score = 90.1 bits (222), Expect = 5e-17 Identities = 57/152 (37%), Positives = 83/152 (54%), Gaps = 4/152 (2%) Frame = -1
Query: 450 QAMKAISNKITRFAHLMGLPSFKFKVIYDPTLEKIDAQSLDVGLGEALVVNLNQTL---- 283 Q MK I ++ RFA LMG+P F++ V ++P LEK++ +LD+ E L + N TL Sbjct: 154 QVMKQIMTRLERFARLMGVP-FEYVVKHEPQLEKLELAALDLRQDEVLAITCNHTLHHVS 212
Query: 282 QCVPIRGSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFV 103 + VP RG +Y SPRD++L NPKIM++VE EVD S F FC +F S+ Sbjct: 213 EIVP-RGEQY---SPRDVLLCTFRNANPKIMILVEEEVDLTSPDFIVCFCEALKFYSLLF 268
Query: 102 GSMDRPDMPANQARLHVQEEVAKIMIVNSIAC 7 S++ + P + E + +VN I C Sbjct: 269 ESLEE-NFPRTSNERLILERICARNLVNLIGC 299
>tr|A9RBV3|A9RBV3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_22633 PE=4 SV=1 Length = 377
Score = 80.5 bits (197), Expect = 4e-14 Identities = 50/142 (35%), Positives = 77/142 (54%) Frame = -1
Query: 450 QAMKAISNKITRFAHLMGLPSFKFKVIYDPTLEKIDAQSLDVGLGEALVVNLNQTLQCVP 271 + MK + N+I RFA LMG+P F+ VI+ P LE +D L++ GEAL VN QTL + Sbjct: 159 RVMKQVMNRIDRFARLMGVP-FESTVIHKPHLETLDLDELNLREGEALAVNCVQTLHHIS 217
Query: 270 IRGSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFVGSMD 91 + SPRD +L + PKI+ IVE+E + +S F F +F S+ S++ Sbjct: 218 ECVAAEEQYSPRDRILSTFRSAKPKILSIVEDEANMISPDFLGCFREALRFYSLLFESLE 277
Query: 90 RPDMPANQARLHVQEEVAKIMI 25 A+ RL ++ A+ ++ Sbjct: 278 ESFPRASNERLMLERNCARKLV 299
>tr|B4XI11|B4XI11_PINRA Short-root OS=Pinus radiata GN=SHR PE=2 SV=1 Length = 502
Score = 78.2 bits (191), Expect = 2e-13 Identities = 50/148 (33%), Positives = 78/148 (52%) Frame = -1
Query: 450 QAMKAISNKITRFAHLMGLPSFKFKVIYDPTLEKIDAQSLDVGLGEALVVNLNQTLQCVP 271 + MK I ++ +FA LMG+P F+F VI+ L K++ +L + EAL +N +LQ V Sbjct: 289 KVMKEIGQRMEKFARLMGVP-FEFSVIHQHHLHKLNVGALKIRPDEALAINCIHSLQRVT 347
Query: 270 IRGSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFVGSMD 91 G RD +L + NPKI+ +VE+EVD F + F +F S+F S++ Sbjct: 348 KNG--------RDSILSTFYSMNPKIVTVVEDEVDLTHEDFGDCFSECLRFFSLFFDSLE 399
Query: 90 RPDMPANQARLHVQEEVAKIMIVNSIAC 7 + RL ++ A+ IVN +AC Sbjct: 400 ESFSRTSNERLMLERTSAR-SIVNILAC 426
>tr|A7QB46|A7QB46_VITVI Chromosome chr4 scaffold_73, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034801001 PE=4 SV=1 Length = 562
Score = 64.3 bits (155), Expect = 3e-09 Identities = 45/148 (30%), Positives = 73/148 (49%) Frame = -1
Query: 444 MKAISNKITRFAHLMGLPSFKFKVIYDPTLEKIDAQSLDVGLGEALVVNLNQTLQCVPIR 265 +K I ++ + A G+P F+F+ I T + I L+ GEAL+VN L +P Sbjct: 348 LKIIGQRLEQLAEACGVP-FEFRAIAAKTAD-ITPSMLNCLPGEALLVNCAFQLHHMP-- 403
Query: 264 GSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFVGSMDRP 85 + RD +LRM+ + PK++ +VE +V+ + F RF Y + S S+D Sbjct: 404 DESVSTVNQRDQLLRMIKSLTPKLVTVVEQDVNTNTAPFFPRFIEAYNYYSAVFESLDAT 463
Query: 84 DMPANQARLHVQEEVAKIMIVNSIACSG 1 N R++V++ IVN +AC G Sbjct: 464 LPRENPDRINVEKHCLARDIVNIVACEG 491
>tr|A5ASP1|A5ASP1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032120 PE=4 SV=1 Length = 341
Score = 64.3 bits (155), Expect = 3e-09 Identities = 45/148 (30%), Positives = 73/148 (49%) Frame = -1
Query: 444 MKAISNKITRFAHLMGLPSFKFKVIYDPTLEKIDAQSLDVGLGEALVVNLNQTLQCVPIR 265 +K I ++ + A G+P F+F+ I T + I L+ GEAL+VN L +P Sbjct: 127 LKIIGQRLEQLAEACGVP-FEFRAIAAKTAD-ITPSMLNCLPGEALLVNCAFQLHHMP-- 182
Query: 264 GSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFVGSMDRP 85 + RD +LRM+ + PK++ +VE +V+ + F RF Y + S S+D Sbjct: 183 DESVSTVNQRDQLLRMIKSLTPKLVTVVEQDVNTNTAPFFPRFIEAYNYYSAVFESLDAT 242
Query: 84 DMPANQARLHVQEEVAKIMIVNSIACSG 1 N R++V++ IVN +AC G Sbjct: 243 LPRENPDRINVEKHCLARDIVNIVACEG 270
>tr|A7NSM0|A7NSM0_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014315001 PE=4 SV=1 Length = 565
Score = 63.9 bits (154), Expect = 4e-09 Identities = 45/148 (30%), Positives = 72/148 (48%) Frame = -1
Query: 444 MKAISNKITRFAHLMGLPSFKFKVIYDPTLEKIDAQSLDVGLGEALVVNLNQTLQCVPIR 265 +K I ++ A + L SF+F+ + T + L+ GEALVVN L +P Sbjct: 351 LKVIGQRLENLAEDLNL-SFEFQAVASKT-SNVTPGMLNCKPGEALVVNFAFQLHHMP-- 406
Query: 264 GSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFVGSMDRP 85 + RD +LRM+ + NPK++ IVE ++ + F RF Y + S S+D Sbjct: 407 DESVSTVNQRDQLLRMVKSLNPKLVTIVEQDMHTNTAPFFPRFVEAYNYYSSMFDSLDAT 466
Query: 84 DMPANQARLHVQEEVAKIMIVNSIACSG 1 +Q R++V+ + IVN +AC G Sbjct: 467 LPRGSQDRVNVERQCLARDIVNIVACEG 494
>tr|A5AZP2|A5AZP2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033720 PE=4 SV=1 Length = 349
Score = 63.9 bits (154), Expect = 4e-09 Identities = 45/148 (30%), Positives = 72/148 (48%) Frame = -1
Query: 444 MKAISNKITRFAHLMGLPSFKFKVIYDPTLEKIDAQSLDVGLGEALVVNLNQTLQCVPIR 265 +K I ++ A + L SF+F+ + T + L+ GEALVVN L +P Sbjct: 135 LKVIGQRLENLAEDLNL-SFEFQAVASKT-SNVTPGMLNCKPGEALVVNFAFQLHHMP-- 190
Query: 264 GSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFVGSMDRP 85 + RD +LRM+ + NPK++ IVE ++ + F RF Y + S S+D Sbjct: 191 DESVSTVNQRDQLLRMVKSLNPKLVTIVEQDMHTNTAPFFPRFVEAYNYYSSMFDSLDAT 250
Query: 84 DMPANQARLHVQEEVAKIMIVNSIACSG 1 +Q R++V+ + IVN +AC G Sbjct: 251 LPRGSQDRVNVERQCLARDIVNIVACEG 278
>tr|A5HJS4|A5HJS4_9POAL Scarecrow OS=Aeluropus littoralis PE=4 SV=1 Length = 571
Score = 63.2 bits (152), Expect = 6e-09 Identities = 44/148 (29%), Positives = 72/148 (48%) Frame = -1
Query: 444 MKAISNKITRFAHLMGLPSFKFKVIYDPTLEKIDAQSLDVGLGEALVVNLNQTLQCVPIR 265 ++ I ++ + A G+ SF+F+ I + + LD LGEALVVN L +P Sbjct: 357 LRVIGQRLEKLAEDCGV-SFEFRAI-GANIGDVTPAMLDCHLGEALVVNFAFQLHHLPDE 414
Query: 264 GSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFVGSMDRP 85 E RD +LRM+ PK++ +VE + + + F RF +Y + S S+D Sbjct: 415 SVSIMNE--RDQLLRMVRGLQPKLVTLVEQDANTNTAPFLTRFREVYDYYSALFDSLDAT 472
Query: 84 DMPANQARLHVQEEVAKIMIVNSIACSG 1 + R++V+ + IVN +AC G Sbjct: 473 LPRESPDRMNVERQCLAREIVNILACEG 500
>tr|A9U324|A9U324_PHYPA PAL1B encoding AtPAT1-like protein OS=Physcomitrella patens subsp. patens GN=PAL1B PE=4 SV=1 Length = 355
Score = 61.6 bits (148), Expect = 2e-08 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 3/151 (1%) Frame = -1
Query: 444 MKAISNKITRFAHLMGLPSFKFKVIYDPTLEK---IDAQSLDVGLGEALVVNLNQTLQCV 274 ++ + ++ A +G+P ++ P +K I+A L+ GEAL VN L + Sbjct: 141 VEMVGKRLANLAEAVGVP-----FVFHPVAKKGTEIEAWMLERQQGEALAVNFALQLHHM 195
Query: 273 PIRGSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFVGSM 94 P +PRD +L M+ NPK+M +VE E + + F RF + S S+ Sbjct: 196 P--DESVCTSNPRDRMLHMIKGLNPKVMTLVEQESNTNTAPFFPRFLEALSYYSAIFESL 253
Query: 93 DRPDMPANQARLHVQEEVAKIMIVNSIACSG 1 D ++ R++V+++ IVN IAC G Sbjct: 254 DITLARESKERVNVEQQCLARDIVNIIACEG 284
>tr|Q8RZQ6|Q8RZQ6_ORYSJ cDNA clone:001-034-C07, full insert sequence OS=Oryza sativa subsp. japonica GN=B1065E10.4 PE=2 SV=1 Length = 553
Score = 60.1 bits (144), Expect = 5e-08 Identities = 42/148 (28%), Positives = 71/148 (47%) Frame = -1
Query: 444 MKAISNKITRFAHLMGLPSFKFKVIYDPTLEKIDAQSLDVGLGEALVVNLNQTLQCVPIR 265 +K I ++ + A G+ SF+F+ + + + LD GEALVVN L +P Sbjct: 339 LKVIGQRLEKLAEDCGI-SFEFRAV-GANIGDVTPAMLDCCPGEALVVNFAFQLHHLPDE 396
Query: 264 GSKYGGESPRDMVLRMLCTCNPKIMVIVENEVDQLSNTFAERFCSLYQFVSVFVGSMDRP 85 E RD +LRM+ PK++ +VE + + + F RF +Y + + S+D Sbjct: 397 SVSIMNE--RDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYAALFDSLDAT 454
Query: 84 DMPANQARLHVQEEVAKIMIVNSIACSG 1 + R++V+ + IVN +AC G Sbjct: 455 LPRESPDRMNVERQCLAREIVNILACEG 482
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