BP913872 |
Clone id |
YMU001_000037_C10 |
Library |
YMU01 |
Length |
605 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000037_C10. |
Accession |
BP913872 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2209Contig1 |
Sequence |
CCAGCACTCACGTATGCCCAAGTTCCCGGGCAGCATACCCAACCAACTGCCTAAAACGTA TGATAAAAGATCGACAGATGTCAACCCATAGAGATAATTGCTGAGAGATAATGGCAATAA CGGGCTCAACCGCAATAATACAACAACTCGGAAACCATTTTCACCGATGGCCCTATCAAT AGCCAAAAACTTTTTGTTGCCCTCTGCCAGCTTCAGAATTCGATCACGAGCCAAATATCG GGCAATAAGAAAAGCGGCAGTCGCCGCAATCGTCCCCGCAATTGAGACAAGAATGGTTCC CACCAACGTGCCAAACAGTAAGCCTGCTGACATTGTTAAGGGTATGGCTGGTATTGCAAG TACCTCAAGACCTGCATAGCCAGCTACAAATATTGCATAACCAGCAGCACCATAACCTTC TATAAAATCTGAAAATTTTAATAAAAAGTCATTGATTTGGTCTTCGTAGATATAACTGGC AGCTCCAAAACCACCAATGATTCCCACAAGAAGTAAACCAGCAGCTATGCTTCCTTTCAT AGCTGCATCCCCTGATATTAATTCATCATCACTCTCACTGTCGTCTGACTGTTCTTGGCT CTCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q55909 |
Definition |
sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp. (strain PCC 6803) |
Align length |
144 |
Score (bit) |
108.0 |
E-value |
2.0e-23 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LQ12 |
Definition |
tr|B8LQ12|B8LQ12_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
178 |
Score (bit) |
218.0 |
E-value |
4.0e-56 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913872|Adiantum capillus-veneris mRNA, clone: YMU001_000037_C10. (605 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LQ12|B8LQ12_PICSI Putative uncharacterized protein OS=Picea... 218 4e-56 tr|A7Q813|A7Q813_VITVI Chromosome chr18 scaffold_61, whole genom... 216 2e-55 tr|A9PH39|A9PH39_POPTR Putative uncharacterized protein OS=Popul... 216 2e-55 tr|A9PFS1|A9PFS1_POPTR Putative uncharacterized protein OS=Popul... 215 2e-55 tr|B6U874|B6U874_MAIZE Putative uncharacterized protein OS=Zea m... 213 2e-54 tr|A9TP29|A9TP29_PHYPA Predicted protein (Fragment) OS=Physcomit... 212 2e-54 tr|O23137|O23137_ARATH Putative uncharacterized protein F29G20.1... 213 4e-54 tr|A9RYK0|A9RYK0_PHYPA Predicted protein (Fragment) OS=Physcomit... 211 4e-54 tr|A2WXP4|A2WXP4_ORYSI Putative uncharacterized protein OS=Oryza... 212 6e-54 tr|A3A0A6|A3A0A6_ORYSJ Putative uncharacterized protein OS=Oryza... 212 6e-54 tr|B4FND3|B4FND3_MAIZE Putative uncharacterized protein OS=Zea m... 212 6e-54 tr|B6STF9|B6STF9_MAIZE Putative uncharacterized protein OS=Zea m... 210 2e-53 tr|A9TX51|A9TX51_PHYPA Predicted protein (Fragment) OS=Physcomit... 197 2e-49 tr|A5BXR4|A5BXR4_VITVI Putative uncharacterized protein OS=Vitis... 178 2e-43 tr|A8HMR2|A8HMR2_CHLRE Predicted protein OS=Chlamydomonas reinha... 159 2e-37 tr|Q015K0|Q015K0_OSTTA Homology to unknown gene OS=Ostreococcus ... 155 1e-36 tr|A4S005|A4S005_OSTLU Predicted protein (Fragment) OS=Ostreococ... 146 8e-34 tr|B2ELF8|B2ELF8_9BACT SNARE associated Golgi protein OS=bacteri... 123 7e-27 tr|Q7UEP9|Q7UEP9_RHOBA Putative uncharacterized protein OS=Rhodo... 114 4e-24 tr|Q0JH44|Q0JH44_ORYSJ Os01g0884900 protein (Fragment) OS=Oryza ... 107 9e-23 tr|B4AW72|B4AW72_9CHRO SNARE associated Golgi protein OS=Cyanoth... 109 1e-22 tr|Q1NQJ9|Q1NQJ9_9DELT DedA OS=delta proteobacterium MLMS-1 GN=M... 108 3e-22 tr|Q1NJ05|Q1NJ05_9DELT DedA OS=delta proteobacterium MLMS-1 GN=M... 108 3e-22 tr|B7KHF6|B7KHF6_9CHRO SNARE associated Golgi protein OS=Cyanoth... 107 4e-22 tr|Q2JNV7|Q2JNV7_SYNJB Putative membrane protein OS=Synechococcu... 107 5e-22 tr|B7K5V6|B7K5V6_SYNP8 SNARE associated Golgi protein OS=Synecho... 107 5e-22 tr|B4BU99|B4BU99_9CHRO SNARE associated Golgi protein OS=Cyanoth... 107 5e-22 tr|B1ZQB8|B1ZQB8_OPITP SNARE associated Golgi protein OS=Opitutu... 106 1e-21 tr|A0YJ59|A0YJ59_9CYAN Putative uncharacterized protein OS=Lyngb... 106 1e-21 tr|Q113T0|Q113T0_TRIEI Putative uncharacterized protein OS=Trich... 104 5e-21
>tr|B8LQ12|B8LQ12_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 375
Score = 218 bits (554), Expect(2) = 4e-56 Identities = 111/178 (62%), Positives = 126/178 (70%) Frame = -3
Query: 558 ISGDAAMKXXXXXXXXXXXXXXXXXXASYIYEDQINDFLLKFSDFIEGYGAAGYAIFVAG 379 I GD A+K Y Y DQIN FL++FSDF+EGYG GYA+FVA Sbjct: 138 IGGDTALKGTILAALLLVGVVGGFGGVGYFYRDQINTFLIQFSDFLEGYGPVGYALFVAV 197
Query: 378 YAGLEVLAIPAIPLTMSAGLLFGTLVGTILVSIAGTIAATAAFLIARYLARDRILKLAEG 199 YAGLE+LAIPAIPLTMSAGLLFG + GTI+VSI+GTIAAT AFL+ARY AR+RI+KL EG Sbjct: 198 YAGLEILAIPAIPLTMSAGLLFGNVTGTIIVSISGTIAATVAFLVARYFARERIMKLVEG 257
Query: 198 NKKFLAIDRAIGENGFXXXXXXXXXXXXXXXXSNYLYGLTSVDLLSYVLGSWLGMLPG 25 NKKF+AID+AIGENGF NYLYGLTSV L+ YVLGSWLGMLPG Sbjct: 258 NKKFVAIDKAIGENGFRVVTLLRLSPLLPFSVGNYLYGLTSVKLVPYVLGSWLGMLPG 315
Score = 24.6 bits (52), Expect(2) = 4e-56 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PGTWAYVSA Sbjct: 314 PGTWAYVSA 322
>tr|A7Q813|A7Q813_VITVI Chromosome chr18 scaffold_61, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032083001 PE=4 SV=1 Length = 333
Score = 216 bits (549), Expect(2) = 2e-55 Identities = 113/179 (63%), Positives = 126/179 (70%) Frame = -3
Query: 561 LISGDAAMKXXXXXXXXXXXXXXXXXXASYIYEDQINDFLLKFSDFIEGYGAAGYAIFVA 382 L SGD A+K Y+Y DQIN FL +FS FIEGYG AGYA+FVA Sbjct: 96 LESGDTAVKGTLLAGLLLVGVVGGFATVGYVYRDQINAFLTQFSGFIEGYGPAGYALFVA 155
Query: 381 GYAGLEVLAIPAIPLTMSAGLLFGTLVGTILVSIAGTIAATAAFLIARYLARDRILKLAE 202 YAGLE+LAIPAIPLTMSAGLLFG+ GTI+VSI+GT+AA+ AFLIARY AR+RILKL E Sbjct: 156 VYAGLEILAIPAIPLTMSAGLLFGSFTGTIIVSISGTVAASVAFLIARYFARERILKLVE 215
Query: 201 GNKKFLAIDRAIGENGFXXXXXXXXXXXXXXXXSNYLYGLTSVDLLSYVLGSWLGMLPG 25 GNKKFLAID+AIGENGF NYLYGLTSV + YVLGSWLGMLPG Sbjct: 216 GNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPG 274
Score = 24.6 bits (52), Expect(2) = 2e-55 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PGTWAYVSA Sbjct: 273 PGTWAYVSA 281
>tr|A9PH39|A9PH39_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 331
Score = 216 bits (549), Expect(2) = 2e-55 Identities = 112/178 (62%), Positives = 127/178 (71%) Frame = -3
Query: 558 ISGDAAMKXXXXXXXXXXXXXXXXXXASYIYEDQINDFLLKFSDFIEGYGAAGYAIFVAG 379 + GD A K YIY+DQIN FL +FS FIEGYG AGYA+FVA Sbjct: 95 LEGDTAFKGTLLAGVLLVGVVGGFGAVGYIYKDQINAFLNQFSGFIEGYGPAGYALFVAV 154
Query: 378 YAGLEVLAIPAIPLTMSAGLLFGTLVGTILVSIAGTIAATAAFLIARYLARDRILKLAEG 199 YAGLE+LAIPAIPLTMSAGLLFG+L+GTI+VSI+GT+AA+ AFLIARY AR+RILKL +G Sbjct: 155 YAGLEILAIPAIPLTMSAGLLFGSLIGTIIVSISGTVAASIAFLIARYFARERILKLVQG 214
Query: 198 NKKFLAIDRAIGENGFXXXXXXXXXXXXXXXXSNYLYGLTSVDLLSYVLGSWLGMLPG 25 NKKFLAID+AIGENGF NYLYGLTSV + YVLGSWLGMLPG Sbjct: 215 NKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFIPYVLGSWLGMLPG 272
Score = 24.6 bits (52), Expect(2) = 2e-55 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PGTWAYVSA Sbjct: 271 PGTWAYVSA 279
>tr|A9PFS1|A9PFS1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 321
Score = 215 bits (548), Expect(2) = 2e-55 Identities = 113/178 (63%), Positives = 126/178 (70%) Frame = -3
Query: 558 ISGDAAMKXXXXXXXXXXXXXXXXXXASYIYEDQINDFLLKFSDFIEGYGAAGYAIFVAG 379 + GD A K YIY+DQIN FL +FS FIEGYG AGYA+FVA Sbjct: 85 LEGDTAFKGTLLAGVLLVGVVGGFGAVGYIYKDQINAFLNQFSGFIEGYGPAGYALFVAV 144
Query: 378 YAGLEVLAIPAIPLTMSAGLLFGTLVGTILVSIAGTIAATAAFLIARYLARDRILKLAEG 199 YAGLE+LAIPAIPLTMSAGLLFG+L+GTI+VSI+GT AA+ AFLIARY AR+RILKL EG Sbjct: 145 YAGLEILAIPAIPLTMSAGLLFGSLIGTIIVSISGTAAASIAFLIARYFARERILKLVEG 204
Query: 198 NKKFLAIDRAIGENGFXXXXXXXXXXXXXXXXSNYLYGLTSVDLLSYVLGSWLGMLPG 25 NKKFLAID+AIGENGF NYLYGLTSV + YVLGSWLGMLPG Sbjct: 205 NKKFLAIDKAIGENGFKVVTLLRLSPLLPFSLGNYLYGLTSVKFIPYVLGSWLGMLPG 262
Score = 24.6 bits (52), Expect(2) = 2e-55 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PGTWAYVSA Sbjct: 261 PGTWAYVSA 269
>tr|B6U874|B6U874_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 328
Score = 213 bits (543), Expect(2) = 2e-54 Identities = 108/151 (71%), Positives = 120/151 (79%) Frame = -3
Query: 474 YIYEDQINDFLLKFSDFIEGYGAAGYAIFVAGYAGLEVLAIPAIPLTMSAGLLFGTLVGT 295 Y+Y+DQIN FL +FS FI+GYG AGYA+FV YAGLEVLAIPAIPLTMSAGLLFG++ GT Sbjct: 120 YVYKDQINTFLTQFSGFIDGYGPAGYALFVLVYAGLEVLAIPAIPLTMSAGLLFGSVTGT 179
Query: 294 ILVSIAGTIAATAAFLIARYLARDRILKLAEGNKKFLAIDRAIGENGFXXXXXXXXXXXX 115 I+VSI+GT+AA AFLIARY ARDRILKL EGNKKFLAID+AIGENGF Sbjct: 180 IIVSISGTLAAAVAFLIARYFARDRILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLL 239
Query: 114 XXXXSNYLYGLTSVDLLSYVLGSWLGMLPGN 22 NYLYGLTSV L YVLGSWLGMLPG+ Sbjct: 240 PFSLGNYLYGLTSVKFLPYVLGSWLGMLPGS 270
Score = 23.1 bits (48), Expect(2) = 2e-54 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PG+WAYVSA Sbjct: 268 PGSWAYVSA 276
>tr|A9TP29|A9TP29_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_4853 PE=4 SV=1 Length = 252
Score = 212 bits (539), Expect(2) = 2e-54 Identities = 105/149 (70%), Positives = 120/149 (80%) Frame = -3
Query: 471 IYEDQINDFLLKFSDFIEGYGAAGYAIFVAGYAGLEVLAIPAIPLTMSAGLLFGTLVGTI 292 +Y++QIND L +FSDF+EGYG AGYA+F+ YAGLEVLAIPA+PLTMSAGLLFGTL GTI Sbjct: 40 VYKEQINDILTQFSDFLEGYGPAGYALFIVAYAGLEVLAIPAVPLTMSAGLLFGTLYGTI 99
Query: 291 LVSIAGTIAATAAFLIARYLARDRILKLAEGNKKFLAIDRAIGENGFXXXXXXXXXXXXX 112 LVSIAGT+AAT AFL+ARY ARDRILKLA+ N KFLAID+AIG +GF Sbjct: 100 LVSIAGTLAATVAFLVARYFARDRILKLAQNNPKFLAIDKAIGADGFRVVTLLRLSPLLP 159
Query: 111 XXXSNYLYGLTSVDLLSYVLGSWLGMLPG 25 NYLYGLTSV+L+ YVLGSWLGMLPG Sbjct: 160 FSLGNYLYGLTSVELVPYVLGSWLGMLPG 188
Score = 24.6 bits (52), Expect(2) = 2e-54 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PGTWAYVSA Sbjct: 187 PGTWAYVSA 195
>tr|O23137|O23137_ARATH Putative uncharacterized protein F29G20.19 (At1g22850/F29G20_19) OS=Arabidopsis thaliana GN=At1g22850 PE=2 SV=1 Length = 344
Score = 213 bits (541), Expect(2) = 4e-54 Identities = 109/177 (61%), Positives = 126/177 (71%) Frame = -3
Query: 552 GDAAMKXXXXXXXXXXXXXXXXXXASYIYEDQINDFLLKFSDFIEGYGAAGYAIFVAGYA 373 GDAA+K Y+Y DQIN FL +FS +IEGYG AGYA+F+A YA Sbjct: 102 GDAAIKGTILAGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAGYALFIAVYA 161
Query: 372 GLEVLAIPAIPLTMSAGLLFGTLVGTILVSIAGTIAATAAFLIARYLARDRILKLAEGNK 193 GLE+LAIPA+PLTMSAGLLFG L+GTI+VSI+GT+AA+ AFLIARY AR+RILKL E NK Sbjct: 162 GLEILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLVEDNK 221
Query: 192 KFLAIDRAIGENGFXXXXXXXXXXXXXXXXSNYLYGLTSVDLLSYVLGSWLGMLPGN 22 KFLAID+AIGENGF NYLYGLTSV + YVLGSWLGMLPG+ Sbjct: 222 KFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGS 278
Score = 23.1 bits (48), Expect(2) = 4e-54 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PG+WAYVSA Sbjct: 276 PGSWAYVSA 284
>tr|A9RYK0|A9RYK0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_24478 PE=4 SV=1 Length = 249
Score = 211 bits (537), Expect(2) = 4e-54 Identities = 106/149 (71%), Positives = 120/149 (80%) Frame = -3
Query: 471 IYEDQINDFLLKFSDFIEGYGAAGYAIFVAGYAGLEVLAIPAIPLTMSAGLLFGTLVGTI 292 +Y++QIND L +FSDF+EGYG AGYA+FV YAGLEVLAIPA+PLTMSAGLLFGTL GTI Sbjct: 40 VYKEQINDILTQFSDFLEGYGPAGYALFVIAYAGLEVLAIPAVPLTMSAGLLFGTLYGTI 99
Query: 291 LVSIAGTIAATAAFLIARYLARDRILKLAEGNKKFLAIDRAIGENGFXXXXXXXXXXXXX 112 LVSIAGTIAAT +FLIARY ARDRILKLA+ N KFLAID+AIG +GF Sbjct: 100 LVSIAGTIAATVSFLIARYFARDRILKLAQDNPKFLAIDKAIGADGFRVVTLLRLSPLLP 159
Query: 111 XXXSNYLYGLTSVDLLSYVLGSWLGMLPG 25 NYLYGLTSV+L+ Y+LGSWLGMLPG Sbjct: 160 FSLGNYLYGLTSVELVPYILGSWLGMLPG 188
Score = 24.6 bits (52), Expect(2) = 4e-54 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PGTWAYVSA Sbjct: 187 PGTWAYVSA 195
>tr|A2WXP4|A2WXP4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04696 PE=4 SV=1 Length = 346
Score = 212 bits (539), Expect(2) = 6e-54 Identities = 106/151 (70%), Positives = 120/151 (79%) Frame = -3
Query: 474 YIYEDQINDFLLKFSDFIEGYGAAGYAIFVAGYAGLEVLAIPAIPLTMSAGLLFGTLVGT 295 Y+Y+DQIN FL +FS FI+GYG AGYA+FV YAGLEVLAIPAIPLTMSAGLLFG++ GT Sbjct: 138 YVYKDQINTFLTQFSGFIDGYGPAGYALFVLVYAGLEVLAIPAIPLTMSAGLLFGSITGT 197
Query: 294 ILVSIAGTIAATAAFLIARYLARDRILKLAEGNKKFLAIDRAIGENGFXXXXXXXXXXXX 115 ++VSI+GT+AA AFLIARY AR+RILKL EGNKKFLAID+AIGENGF Sbjct: 198 VIVSISGTLAAAVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLL 257
Query: 114 XXXXSNYLYGLTSVDLLSYVLGSWLGMLPGN 22 NYLYGLTSV L YVLGSWLGMLPG+ Sbjct: 258 PFSLGNYLYGLTSVKFLPYVLGSWLGMLPGS 288
Score = 23.1 bits (48), Expect(2) = 6e-54 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PG+WAYVSA Sbjct: 286 PGSWAYVSA 294
>tr|A3A0A6|A3A0A6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004228 PE=4 SV=1 Length = 340
Score = 212 bits (539), Expect(2) = 6e-54 Identities = 106/151 (70%), Positives = 120/151 (79%) Frame = -3
Query: 474 YIYEDQINDFLLKFSDFIEGYGAAGYAIFVAGYAGLEVLAIPAIPLTMSAGLLFGTLVGT 295 Y+Y+DQIN FL +FS FI+GYG AGYA+FV YAGLEVLAIPAIPLTMSAGLLFG++ GT Sbjct: 132 YVYKDQINTFLTQFSGFIDGYGPAGYALFVLVYAGLEVLAIPAIPLTMSAGLLFGSITGT 191
Query: 294 ILVSIAGTIAATAAFLIARYLARDRILKLAEGNKKFLAIDRAIGENGFXXXXXXXXXXXX 115 ++VSI+GT+AA AFLIARY AR+RILKL EGNKKFLAID+AIGENGF Sbjct: 192 VIVSISGTLAAAVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLSPLL 251
Query: 114 XXXXSNYLYGLTSVDLLSYVLGSWLGMLPGN 22 NYLYGLTSV L YVLGSWLGMLPG+ Sbjct: 252 PFSLGNYLYGLTSVKFLPYVLGSWLGMLPGS 282
Score = 23.1 bits (48), Expect(2) = 6e-54 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -1
Query: 29 PGTWAYVSA 3 PG+WAYVSA Sbjct: 280 PGSWAYVSA 288
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