BP913874 |
Clone id |
YMU001_000037_C12 |
Library |
YMU01 |
Length |
529 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000037_C12. |
Accession |
BP913874 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACGAACGATATAAGGCTAGGTGGTGATGTCTTAAGGAACCTGGATTCTGAAGGAGCCAA AATGAGTCTAGCATCAGATGGTGGTTTTTTGGAGGGGCCAAACCCATCAGGGTTTAAGAT CACTATCTTCAACTCTAATGCAGACGTTGTGATGGTAGGCTGCAGAGTGCATGTTGGGAA TTCCAGTACGAGTCACATCCCTTCTGAGCTTCGCATATTTCAGAGAGCTGTGAAGCTGGA GGAAGGGGTGCGCAGCTGGTATGATTTGCCATTTACAAATGCAGAGGCTTTATTAGCGGA TGAAGAGTTTACACTTACTGTTGGCTCAACTTTTGGAGGCTTCTCACTGTCAAGGATAGA CAATCTTGAAGTGTATGGAAGACCTAAGGAAGACTTTGGGTGGAAGGAAAAATTAGAGGC TGTCTTGGACTTGGAAACTCAAGCGTCTGTTTCAGGGTCTGTGGGAAGTAGGAGCAAATT GAAGTTTTTCAAGAGTGCTTCCACAGAAGAGCAAATTGTGGCTGATTGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5T4S7 |
Definition |
sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sapiens |
Align length |
136 |
Score (bit) |
100.0 |
E-value |
4.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S254 |
Definition |
tr|A9S254|A9S254_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
179 |
Score (bit) |
235.0 |
E-value |
9.0e-61 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913874|Adiantum capillus-veneris mRNA, clone: YMU001_000037_C12. (529 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S254|A9S254_PHYPA Predicted protein OS=Physcomitrella paten... 235 9e-61 tr|A9RVH7|A9RVH7_PHYPA Predicted protein OS=Physcomitrella paten... 232 1e-59 tr|A7PAF1|A7PAF1_VITVI Chromosome chr14 scaffold_9, whole genome... 230 4e-59 tr|A5ALD2|A5ALD2_VITVI Putative uncharacterized protein OS=Vitis... 230 4e-59 tr|Q1KUQ1|Q1KUQ1_9ROSI Putative uncharacterized protein OS=Cleom... 225 9e-58 tr|Q9SRU2|Q9SRU2_ARATH Putative uncharacterized protein F14P3.9 ... 213 6e-54 tr|B8BD82|B8BD82_ORYSI Putative uncharacterized protein OS=Oryza... 203 4e-51 tr|A3BWE8|A3BWE8_ORYSJ Putative uncharacterized protein OS=Oryza... 203 4e-51 tr|A2Q2P2|A2Q2P2_MEDTR Zinc finger, ZZ-type; Zinc finger, C2H2-t... 177 4e-43 tr|B6MZN1|B6MZN1_BRAFL Putative uncharacterized protein OS=Branc... 112 1e-23 tr|Q54QG5|Q54QG5_DICDI Putative uncharacterized protein OS=Dicty... 103 5e-21 tr|A8MQB1|A8MQB1_HUMAN Putative uncharacterized protein UBR4 OS=... 100 5e-20 tr|B7P483|B7P483_IXOSC Putative uncharacterized protein OS=Ixode... 91 4e-17 tr|Q4S817|Q4S817_TETNG Chromosome 9 SCAF14710, whole genome shot... 90 8e-17 tr|Q0IES4|Q0IES4_AEDAE F14p3.9 protein (Auxin transport protein)... 87 5e-16 tr|Q7PX10|Q7PX10_ANOGA AGAP001157-PA OS=Anopheles gambiae GN=AGA... 84 6e-15 tr|B4JC01|B4JC01_DROGR GH10162 OS=Drosophila grimshawi GN=GH1016... 80 6e-14 tr|B4LSL6|B4LSL6_DROVI GJ20399 OS=Drosophila virilis GN=GJ20399 ... 78 3e-13 tr|B4KEC2|B4KEC2_DROMO GI22475 OS=Drosophila mojavensis GN=GI224... 78 3e-13 tr|B3MMX5|B3MMX5_DROAN GF15135 OS=Drosophila ananassae GN=GF1513... 78 3e-13 tr|B4HYE1|B4HYE1_DROSE GM13199 OS=Drosophila sechellia GN=GM1319... 77 7e-13 tr|A7RYW6|A7RYW6_NEMVE Predicted protein OS=Nematostella vectens... 77 7e-13 tr|B4H8S2|B4H8S2_DROPE GL24752 OS=Drosophila persimilis GN=GL247... 75 2e-12 tr|B3N6Z7|B3N6Z7_DROER GG23480 OS=Drosophila erecta GN=GG23480 P... 75 2e-12 tr|B4NWD0|B4NWD0_DROYA GE11205 OS=Drosophila yakuba GN=GE11205 P... 75 3e-12 tr|B4MUI1|B4MUI1_DROWI GK14803 OS=Drosophila willistoni GN=GK148... 72 2e-11 tr|A4RUM0|A4RUM0_OSTLU Predicted protein OS=Ostreococcus lucimar... 60 5e-08 tr|B6PX09|B6PX09_BRAFL Putative uncharacterized protein (Fragmen... 60 5e-08 tr|A2Q2P3|A2Q2P3_MEDTR Zinc finger, N-recognin; WD40-like OS=Med... 60 7e-08 tr|A8MPT2|A8MPT2_HUMAN Putative uncharacterized protein UBR4 OS=... 55 3e-06
>tr|A9S254|A9S254_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122877 PE=4 SV=1 Length = 4816
Score = 235 bits (600), Expect = 9e-61 Identities = 112/179 (62%), Positives = 141/179 (78%), Gaps = 4/179 (2%) Frame = +2
Query: 2 TNDIRLGGDVLRNLDSEGAKMSLASDGGFLEGPNPSGFKITIFNSNADVVMVGCRVHVGN 181 T D++LGGD+L N DS+G K+ L ++ GFLEGPN SGFKI + NSN D+VMVGCRVHVGN Sbjct: 1886 TADVKLGGDILLNNDSDGVKLCLQTEDGFLEGPNASGFKILVLNSNPDLVMVGCRVHVGN 1945
Query: 182 SSTSHIPSELRIFQRAVKLEEGVRSWYDLPFTNAEALLADEEFTLTVGSTFGGFSLSRID 361 +S SHIPSEL +FQR+++LEE VR WYD+PF+NAEALLADEEFTL +G FGG SL RID Sbjct: 1946 TSASHIPSELSVFQRSIRLEESVRCWYDIPFSNAEALLADEEFTLVIGPAFGGSSLPRID 2005
Query: 362 NLEVYGRPKEDFGWKEKLEAVLDLETQASVSG----SVGSRSKLKFFKSASTEEQIVAD 526 +LE+YGR K++FGWKEKLEA LDLE+ V S +R+K K ++AS EQ+++D Sbjct: 2006 SLEIYGRSKDEFGWKEKLEAALDLESPGQVGSALIQSSANRTKQKLMQNASPTEQLLSD 2064
>tr|A9RVH7|A9RVH7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_206047 PE=4 SV=1 Length = 4858
Score = 232 bits (591), Expect = 1e-59 Identities = 115/179 (64%), Positives = 143/179 (79%), Gaps = 4/179 (2%) Frame = +2
Query: 2 TNDIRLGGDVLRNLDSEGAKMSLASDGGFLEGPNPSGFKITIFNSNADVVMVGCRVHVGN 181 T D++LGGD+LRN DSEGAK+ L ++ GFLE P+ SGFKI +FNSN D+VMVGCRVHVGN Sbjct: 1890 TADVKLGGDILRNSDSEGAKLCLQAEEGFLEAPSVSGFKILVFNSNPDLVMVGCRVHVGN 1949
Query: 182 SSTSHIPSELRIFQRAVKLEEGVRSWYDLPFTNAEALLADEEFTLTVGSTFGGFSLSRID 361 +S SHIPSEL +FQR++KLEEGVR WYD+PFT++EALLADEEFT+ +G TF G SL RID Sbjct: 1950 TSASHIPSELCVFQRSIKLEEGVRCWYDIPFTDSEALLADEEFTIFIGPTFSGSSLPRID 2009
Query: 362 NLEVYGRPKEDFGWKEKLEAVLDLE----TQASVSGSVGSRSKLKFFKSASTEEQIVAD 526 LE+YGR KEDFGWKEKL+AVLD E +++ S SR+K K ++AS EQ+ +D Sbjct: 2010 YLEIYGRSKEDFGWKEKLDAVLDSEPAGHAGTNLTQSGLSRTKHKLAQNASPLEQLFSD 2068
>tr|A7PAF1|A7PAF1_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038089001 PE=4 SV=1 Length = 5125
Score = 230 bits (586), Expect = 4e-59 Identities = 111/177 (62%), Positives = 142/177 (80%), Gaps = 2/177 (1%) Frame = +2
Query: 2 TNDIRLGGDVLRNLDSEGAKMSLASDGGFLEGPNPSGFKITIFNSNADVVMVGCRVHVGN 181 T D++LGGD +RN DSEGAK SL S+ GFLE P+P+GFKIT+ NSN D+VMVG RVHVGN Sbjct: 2189 TADVKLGGDAVRNGDSEGAKHSLVSEDGFLESPSPAGFKITVANSNPDIVMVGFRVHVGN 2248
Query: 182 SSTSHIPSELRIFQRAVKLEEGVRSWYDLPFTNAEALLADEEFTLTVGSTFGGFSLSRID 361 +S SHIPS++ IFQR +KL++G+RSWYD+PFT AE+LLADEEFT++VGSTF G +L RID Sbjct: 2249 TSASHIPSDITIFQRVIKLDDGMRSWYDIPFTVAESLLADEEFTVSVGSTFNGSALPRID 2308
Query: 362 NLEVYGRPKEDFGWKEKLEAVLDLETQASVSGS--VGSRSKLKFFKSASTEEQIVAD 526 +LEVYGR K++FGWKEK++A+LD E + S GS K + +SA +EQ+VAD Sbjct: 2309 SLEVYGRAKDEFGWKEKMDAILDREARVLGCNSWVAGSGKKCRSMQSAPIQEQVVAD 2365
>tr|A5ALD2|A5ALD2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016976 PE=4 SV=1 Length = 5622
Score = 230 bits (586), Expect = 4e-59 Identities = 111/177 (62%), Positives = 142/177 (80%), Gaps = 2/177 (1%) Frame = +2
Query: 2 TNDIRLGGDVLRNLDSEGAKMSLASDGGFLEGPNPSGFKITIFNSNADVVMVGCRVHVGN 181 T D++LGGD +RN DSEGAK SL S+ GFLE P+P+GFKIT+ NSN D+VMVG RVHVGN Sbjct: 2977 TADVKLGGDAVRNGDSEGAKHSLVSEDGFLESPSPAGFKITVANSNPDIVMVGFRVHVGN 3036
Query: 182 SSTSHIPSELRIFQRAVKLEEGVRSWYDLPFTNAEALLADEEFTLTVGSTFGGFSLSRID 361 +S SHIPS++ IFQR +KL++G+RSWYD+PFT AE+LLADEEFT++VGSTF G +L RID Sbjct: 3037 TSASHIPSDITIFQRVIKLDDGMRSWYDIPFTVAESLLADEEFTVSVGSTFNGSALPRID 3096
Query: 362 NLEVYGRPKEDFGWKEKLEAVLDLETQASVSGS--VGSRSKLKFFKSASTEEQIVAD 526 +LEVYGR K++FGWKEK++A+LD E + S GS K + +SA +EQ+VAD Sbjct: 3097 SLEVYGRAKDEFGWKEKMDAILDREARVLGCNSWVAGSGKKCRSMQSAPIQEQVVAD 3153
>tr|Q1KUQ1|Q1KUQ1_9ROSI Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1 Length = 5091
Score = 225 bits (574), Expect = 9e-58 Identities = 109/175 (62%), Positives = 138/175 (78%), Gaps = 2/175 (1%) Frame = +2
Query: 8 DIRLGGDVLRNLDSEGAKMSLASDGGFLEGPNPSGFKITIFNSNADVVMVGCRVHVGNSS 187 D+RLGGDV+RN DSEGAK +LAS+ GF+E P+P GFKI++ N N D+VMVG RVHVGN+S Sbjct: 2191 DVRLGGDVIRNGDSEGAKQNLASEDGFIESPSPMGFKISVSNPNPDIVMVGLRVHVGNTS 2250
Query: 188 TSHIPSELRIFQRAVKLEEGVRSWYDLPFTNAEALLADEEFTLTVGSTFGGFSLSRIDNL 367 S IPSE+ IFQR +K++EG+R WYD+PFT AE+LLADE+F + VG TF G +L RID+L Sbjct: 2251 ASSIPSEITIFQRLIKMDEGMRCWYDIPFTVAESLLADEDFVIAVGPTFSGTALPRIDSL 2310
Query: 368 EVYGRPKEDFGWKEKLEAVLDLETQASVSGSV--GSRSKLKFFKSASTEEQIVAD 526 EVYGR K++FGWKEK+EAVLD+E + GS+ GSR K SAS +EQ+ AD Sbjct: 2311 EVYGRAKDEFGWKEKMEAVLDMEARVLGCGSLVAGSRKKRASIHSASIQEQVFAD 2365
>tr|Q9SRU2|Q9SRU2_ARATH Putative uncharacterized protein F14P3.9 (Auxin transport protein) OS=Arabidopsis thaliana GN=BIG PE=4 SV=1 Length = 5079
Score = 213 bits (541), Expect = 6e-54 Identities = 103/177 (58%), Positives = 136/177 (76%), Gaps = 2/177 (1%) Frame = +2
Query: 2 TNDIRLGGDVLRNLDSEGAKMSLASDGGFLEGPNPSGFKITIFNSNADVVMVGCRVHVGN 181 T D+RLG D +RN DSEGAK SLAS+ GF+E P+P GFKI++ N N D+VMVG R+HVG Sbjct: 2174 TADVRLGSDAIRNGDSEGAKQSLASEDGFIESPSPVGFKISVSNPNPDIVMVGIRMHVGT 2233
Query: 182 SSTSHIPSELRIFQRAVKLEEGVRSWYDLPFTNAEALLADEEFTLTVGSTFGGFSLSRID 361 +S S IPSE+ IFQR++K++EG+R WYD+PFT AE+LLADE+ ++VG T G +L RID Sbjct: 2234 TSASSIPSEVTIFQRSIKMDEGMRCWYDIPFTVAESLLADEDVVISVGPTTSGTALPRID 2293
Query: 362 NLEVYGRPKEDFGWKEKLEAVLDLETQASVSGSV--GSRSKLKFFKSASTEEQIVAD 526 +LEVYGR K++FGWKEK++AVLD+E + G + GS K +SAS EEQ++AD Sbjct: 2294 SLEVYGRAKDEFGWKEKMDAVLDMEARVLGHGLLLPGSSKKRALAQSASMEEQVIAD 2350
>tr|B8BD82|B8BD82_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30520 PE=4 SV=1 Length = 4691
Score = 203 bits (517), Expect = 4e-51 Identities = 95/177 (53%), Positives = 129/177 (72%), Gaps = 2/177 (1%) Frame = +2
Query: 2 TNDIRLGGDVLRNLDSEGAKMSLASDGGFLEGPNPSGFKITIFNSNADVVMVGCRVHVGN 181 T D++ D ++ DSE K L+SD G+LE +GFK+TI N N D+VMVGCR+HVGN Sbjct: 1927 TCDVKFNSDTTKSSDSESIKQRLSSDDGYLESLTSAGFKVTISNPNPDIVMVGCRIHVGN 1986
Query: 182 SSTSHIPSELRIFQRAVKLEEGVRSWYDLPFTNAEALLADEEFTLTVGSTFGGFSLSRID 361 +S S+IPSE+ IF R +KL+EG+RSWYD+PFT AE+LLADEEFT+ VG TF G S+ RID Sbjct: 1987 TSASNIPSEITIFHRVIKLDEGMRSWYDIPFTTAESLLADEEFTIVVGRTFDGSSIPRID 2046
Query: 362 NLEVYGRPKEDFGWKEKLEAVLDLETQASVSGSVGSRS--KLKFFKSASTEEQIVAD 526 ++EVYGR K++FGWKEK++A LD+E S +S K + ++A +EQ++AD Sbjct: 2047 SIEVYGRAKDEFGWKEKMDAALDMEAHVLGGSSASGKSGKKAQTMQAAPIQEQVLAD 2103
>tr|A3BWE8|A3BWE8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_027370 PE=4 SV=1 Length = 5034
Score = 203 bits (517), Expect = 4e-51 Identities = 95/177 (53%), Positives = 129/177 (72%), Gaps = 2/177 (1%) Frame = +2
Query: 2 TNDIRLGGDVLRNLDSEGAKMSLASDGGFLEGPNPSGFKITIFNSNADVVMVGCRVHVGN 181 T D++ D ++ DSE K L+SD G+LE +GFK+TI N N D+VMVGCR+HVGN Sbjct: 2129 TCDVKFNSDTTKSSDSESIKQRLSSDDGYLESLTSAGFKVTISNPNPDIVMVGCRIHVGN 2188
Query: 182 SSTSHIPSELRIFQRAVKLEEGVRSWYDLPFTNAEALLADEEFTLTVGSTFGGFSLSRID 361 +S S+IPSE+ IF R +KL+EG+RSWYD+PFT AE+LLADEEFT+ VG TF G S+ RID Sbjct: 2189 TSASNIPSEITIFHRVIKLDEGMRSWYDIPFTTAESLLADEEFTIVVGRTFDGSSIPRID 2248
Query: 362 NLEVYGRPKEDFGWKEKLEAVLDLETQASVSGSVGSRS--KLKFFKSASTEEQIVAD 526 ++EVYGR K++FGWKEK++A LD+E S +S K + ++A +EQ++AD Sbjct: 2249 SIEVYGRAKDEFGWKEKMDAALDMEAHVLGGSSASGKSGKKAQTMQAAPIQEQVLAD 2305
>tr|A2Q2P2|A2Q2P2_MEDTR Zinc finger, ZZ-type; Zinc finger, C2H2-type OS=Medicago truncatula GN=MtrDRAFT_AC151523g36v2 PE=4 SV=1 Length = 2899
Score = 177 bits (448), Expect = 4e-43 Identities = 84/140 (60%), Positives = 112/140 (80%), Gaps = 2/140 (1%) Frame = +2
Query: 113 FKITIFNSNADVVMVGCRVHVGNSSTSHIPSELRIFQRAVKLEEGVRSWYDLPFTNAEAL 292 +KI++FNSN D+VMVG RV+VGN+S SHIPS + IFQR +KL+EG+RSWYD+PFT AE+L Sbjct: 3 WKISVFNSNPDIVMVGFRVNVGNTSASHIPSSISIFQRVIKLDEGMRSWYDIPFTVAESL 62
Query: 293 LADEEFTLTVGSTFGGFSLSRIDNLEVYGRPKEDFGWKEKLEAVLDLETQASVSGSV--G 466 LADEEFT+ VG TF G +L RID+LEVYGR K++FGWKEK++A+LD+E + S + G Sbjct: 63 LADEEFTVLVGPTFNGLTLPRIDSLEVYGRAKDEFGWKEKMDAILDMEARVLGSNASLGG 122
Query: 467 SRSKLKFFKSASTEEQIVAD 526 S K + +SA +EQ++AD Sbjct: 123 SGKKRRSMQSAPIQEQVIAD 142
>tr|B6MZN1|B6MZN1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_125324 PE=4 SV=1 Length = 4564
Score = 112 bits (280), Expect = 1e-23 Identities = 58/133 (43%), Positives = 79/133 (59%) Frame = +2
Query: 20 GGDVLRNLDSEGAKMSLASDGGFLEGPNPSGFKITIFNSNADVVMVGCRVHVGNSSTSHI 199 G D+L+ + + K L + G F+ PSGF I IFNSN +VM G RVHVG+ S Sbjct: 1743 GNDLLQVYNLQQLKHRLNTTGMFVASTKPSGFSIEIFNSNPTMVMTGLRVHVGSQSVERA 1802
Query: 200 PSELRIFQRAVKLEEGVRSWYDLPFTNAEALLADEEFTLTVGSTFGGFSLSRIDNLEVYG 379 PS L IF R + W+DLPFT E+LLAD TL VG++ + +D+++VYG Sbjct: 1803 PSFLEIFGRPTQCTLTRNRWFDLPFTREESLLADRSCTLFVGASLDPSGATMVDSIKVYG 1862
Query: 380 RPKEDFGWKEKLE 418 + KE FGW ++LE Sbjct: 1863 KIKEVFGWPDELE 1875
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