BP913883 |
Clone id |
YMU001_000037_D10 |
Library |
YMU01 |
Length |
521 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000037_D10. |
Accession |
BP913883 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4258Contig1 |
Sequence |
CATGAATCGCAACATGCGAATGCAATTTGCATGATGATTAATTTCTGCATTTTTCTCCAC TAAAGCATCAAAGAGCTGATCAGTGCCCCTATAGCCACCGTCTGCTCCTTTCAGAAATGT TTCAGTGGCCTCTTTCAGATAACCCGATTGTAGAAGGTCATCAACAAAAGACAACCATGT AACCTGTCCACTTAAATTAAAATGCTCCATTGCAGCAAGAAGCTGCTCTCCCTTTTGTTG ATTTCCAACTAAAGCAAAGGAGCTCGCTACAGATGTGAAAGTTTCCTGTAAGGGGATATG ACCTGAGTTCAGCTCTCTTTTGAGAGCATGCAACGCCCCTTCGGCATCTCCTGACCTTGA GTATGAAACAACAAGACCATGAAAACTTCTCGGACCTGGGTTCAATCCTACGGCCACCAT ATCTGCAAACGTTGCCTCTGCTCCTACAGGGTCACCTTCACGAGCTTTAACCATGAGATT TTCCATAAACAAGAAGCGGAGATCGTTCTCTGCACATGATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9T0D6 |
Definition |
sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana |
Align length |
130 |
Score (bit) |
51.2 |
E-value |
3.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913883|Adiantum capillus-veneris mRNA, clone: YMU001_000037_D10. (521 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protei... 51 3e-06 sp|Q9FGR7|PP426_ARATH Pentatricopeptide repeat-containing protei... 48 2e-05 sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protei... 46 9e-05 sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containi... 46 1e-04 sp|Q9LVA2|PP443_ARATH Pentatricopeptide repeat-containing protei... 45 2e-04 sp|Q3ECH5|PP107_ARATH Pentatricopeptide repeat-containing protei... 45 2e-04 sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protei... 44 4e-04 sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protei... 44 6e-04 sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containi... 43 0.001 sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein... 42 0.002 sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protei... 42 0.002 sp|Q5SGE0|LPPRC_RAT Leucine-rich PPR motif-containing protein, m... 42 0.002 sp|Q94JX6|PP391_ARATH Pentatricopeptide repeat-containing protei... 41 0.003 sp|Q9SAA6|PPR34_ARATH Pentatricopeptide repeat-containing protei... 41 0.004 sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containi... 41 0.004 sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protei... 40 0.005 sp|P0C896|PP209_ARATH Pentatricopeptide repeat-containing protei... 40 0.007 sp|Q9FZ19|PPR5_ARATH Putative pentatricopeptide repeat-containin... 39 0.011 sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protei... 39 0.011 sp|Q9SA60|PPR6_ARATH Pentatricopeptide repeat-containing protein... 39 0.015 sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protei... 39 0.015 sp|Q9M1D8|PP288_ARATH Pentatricopeptide repeat-containing protei... 39 0.015 sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protei... 39 0.015 sp|Q1PFA6|PP144_ARATH Pentatricopeptide repeat-containing protei... 39 0.015 sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protei... 39 0.019 sp|Q7X6A5|PPR81_ARATH Pentatricopeptide repeat-containing protei... 38 0.025 sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containi... 38 0.033 sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protei... 38 0.033 sp|Q9LS88|PP250_ARATH Pentatricopeptide repeat-containing protei... 37 0.043 sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protei... 37 0.056
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1 Length = 566
Score = 51.2 bits (121), Expect = 3e-06 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 1/130 (0%) Frame = -3
Query: 423 DMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVASSFALVG 244 D+ + GL+P +++ LV + R GD GA +K G P + T+T + +FA Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 243 NQQKGEQLLAAMEHFNLSGQV-TWLSFVDDLLQSGYLKEATETFLKGADGGYRGTDQLFD 67 N +K QL +ME L V T+ + G + EA+ +LF Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS---------------RLFK 467
Query: 66 ALVEKNAEIN 37 ++VEKN E N Sbjct: 468 SMVEKNCEPN 477
>sp|Q9FGR7|PP426_ARATH Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2 SV=1 Length = 723
Score = 48.1 bits (113), Expect = 2e-05 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 1/148 (0%) Frame = -3
Query: 441 AEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVAS 262 A F M VGL P S+ L+ +YS SG E A + + G P ET+TSV Sbjct: 469 AADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLD 528
Query: 261 SFALVGNQQKGEQLLAAMEHFNLSG-QVTWLSFVDDLLQSGYLKEATETFLKGADGGYRG 85 +F G+ K ++ M + G ++T+ + +D + G EA + + + G + Sbjct: 529 AFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 84 TDQLFDALVEKNAEINHHANCIRMLRFM 1 + ++ L+ A A ++L+ M Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLLKEM 616
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1 Length = 747
Score = 46.2 bits (108), Expect = 9e-05 Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 1/155 (0%) Frame = -3
Query: 462 REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQE 283 REG +M G + +++ L+ Y + G+ AL L G P Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 282 TFTSVASSFALVGNQQKGEQLLAAMEHFNL-SGQVTWLSFVDDLLQSGYLKEATETFLKG 106 T+TS+ S GN + + L M L + T+ + VD Q GY+ EA + Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 105 ADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFM 1 D G+ + ++AL+ + + I +L M Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Score = 36.6 bits (83), Expect = 0.073 Identities = 28/130 (21%), Positives = 63/130 (48%), Gaps = 3/130 (2%) Frame = -3
Query: 429 FADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVASSFAL 250 + +M+ VGL P ++ L+ +Y GD E AL + G +P T++ + + Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 249 VGNQQKGEQLLAAMEH-FNLSGQVTWLSFVDDLLQSGYLKEATETFLKG--ADGGYRGTD 79 ++ ++LL + + ++ VT+ + +++ S ++ + +KG G D Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENC--SNIEFKSVVSLIKGFCMKGMMTEAD 625
Query: 78 QLFDALVEKN 49 Q+F++++ KN Sbjct: 626 QVFESMLGKN 635
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1 Length = 607
Score = 45.8 bits (107), Expect = 1e-04 Identities = 21/85 (24%), Positives = 42/85 (49%) Frame = -3
Query: 462 REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQE 283 +EG + AE +M+ G+ P ++ ++ ++ + GDA+ LK + GH+P Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVV 521
Query: 282 TFTSVASSFALVGNQQKGEQLLAAM 208 T+ + + +G + + LL AM Sbjct: 522 TYNVLLNGLCKLGQMKNADMLLDAM 546
Score = 36.6 bits (83), Expect = 0.073 Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 36/182 (19%) Frame = -3
Query: 462 REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGAL---------------- 331 + GD V A M+ GL P ++ L+ + R GD E AL Sbjct: 392 KNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRV 451
Query: 330 -------------------HALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAM 208 AL+ L +G P T+T + +F G+ Q G +LL M Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 207 E-HFNLSGQVTWLSFVDDLLQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHH 31 + ++ VT+ ++ L + G +K A + G D ++ L+E + + H Sbjct: 512 QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH---HRH 568
Query: 30 AN 25 AN Sbjct: 569 AN 570
Score = 30.8 bits (68), Expect = 4.0 Identities = 24/138 (17%), Positives = 62/138 (44%), Gaps = 1/138 (0%) Frame = -3
Query: 465 AREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQ 286 +R G+ + ++ M++ GL P ++ LV + ++GD A + + + G P + Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 285 ETFTSVASSFALVGNQQKGEQLLAAMEHFNLS-GQVTWLSFVDDLLQSGYLKEATETFLK 109 T+T++ F G+ + ++ M+ + +V + + V + + G + +A + Sbjct: 416 ITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE 475
Query: 108 GADGGYRGTDQLFDALVE 55 G + D + +++ Sbjct: 476 MLRAGIKPDDVTYTMMMD 493
>sp|Q9LVA2|PP443_ARATH Pentatricopeptide repeat-containing protein At5g62370 OS=Arabidopsis thaliana GN=At5g62370 PE=2 SV=1 Length = 982
Score = 45.1 bits (105), Expect = 2e-04 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%) Frame = -3
Query: 462 REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQE 283 ++G V AE TFA M+ G+ P ++ ++ +Y+R+G + A ++ + P Sbjct: 594 KQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSF 653
Query: 282 TFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVT-WLSFVDDLLQSGYLK 133 T+T + S F +G +KG Q L M LS V + + + L+ G K Sbjct: 654 TYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFK 704
>sp|Q3ECH5|PP107_ARATH Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidopsis thaliana GN=At1g66345 PE=2 SV=1 Length = 544
Score = 45.1 bits (105), Expect = 2e-04 Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 12/167 (7%) Frame = -3
Query: 501 LRFLFMENLMV-----------KAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSR 355 L+ L M+N++V KA+EGD V A F +M+ G + + V Sbjct: 292 LKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCE 351
Query: 354 SGDAEGALHALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVT- 178 GD + A L SG P ETF + FA G ++KG + M L + Sbjct: 352 KGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSA 411
Query: 177 WLSFVDDLLQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEIN 37 + V + + + A E K D G+ + + L+ E N Sbjct: 412 FNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGN 458
>sp|O82178|PP186_ARATH Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1 Length = 591
Score = 44.3 bits (103), Expect = 4e-04 Identities = 34/134 (25%), Positives = 67/134 (50%), Gaps = 3/134 (2%) Frame = -3
Query: 480 NLMVKA--REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELN 307 N+MV A R G AEA F +M +G+ P +S L+ +YS++ D +K Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSE 432
Query: 306 SGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLL-QSGYLKE 130 +G P S+ + + +G K E++LA ME+ + ++ + + ++ ++G+L+ Sbjct: 433 NGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLER 492
Query: 129 ATETFLKGADGGYR 88 E F++ + +R Sbjct: 493 IEELFVELKEKNFR 506
Score = 35.4 bits (80), Expect = 0.16 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 24/163 (14%) Frame = -3
Query: 465 AREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSG---DAEGALHALKRELNSGHI 295 +R G P GA F+ M +G P S++ +V +Y R+G DAE +KR G Sbjct: 345 SRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKR---LGIA 401
Query: 294 PLQETFTSVASSFALVGNQQKGEQLLAAMEH-------------FNLSGQVTWLSFVDDL 154 P ++ + S+++ + K E ++ M NL G++ + ++ + Sbjct: 402 PTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKI 461
Query: 153 L---QSGYLKEATETF-----LKGADGGYRGTDQLFDALVEKN 49 L ++G T+ + G G ++LF L EKN Sbjct: 462 LAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 504
Score = 35.0 bits (79), Expect = 0.21 Identities = 23/92 (25%), Positives = 39/92 (42%) Frame = -3
Query: 465 AREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQ 286 AREG AE F + GL P ++ L+ SYSR+G GA + G P + Sbjct: 310 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369
Query: 285 ETFTSVASSFALVGNQQKGEQLLAAMEHFNLS 190 ++ + ++ G E + M+ ++ Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIA 401
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2 SV=1 Length = 509
Score = 43.5 bits (101), Expect = 6e-04 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 1/129 (0%) Frame = -3
Query: 441 AEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVAS 262 AE F +M G+ P SF ++ YSR+ AE L +K G P ET+TSV Sbjct: 271 AEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVK 330
Query: 261 SFALVGNQQKGEQLLAAMEHFNLS-GQVTWLSFVDDLLQSGYLKEATETFLKGADGGYRG 85 G ++ E+LL M +S T+ F + A + K +G + Sbjct: 331 CLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKP 390
Query: 84 TDQLFDALV 58 + Q ++ L+ Sbjct: 391 STQTYNVLL 399
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1 Length = 761
Score = 42.7 bits (99), Expect = 0.001 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 4/135 (2%) Frame = -3
Query: 450 PVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTS 271 P+G E + +M GL P S+ LV ++ + G + A+ G +P + T+TS Sbjct: 349 PIGLEF-YREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 270 VASSFALVGNQ----QKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLKEATETFLKGA 103 + + +GN + G ++L +N+ VT+ + +D L + +KEA E F K Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNV---VTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 102 DGGYRGTDQLFDALV 58 G ++AL+ Sbjct: 465 TAGVIPNLASYNALI 479
Score = 30.8 bits (68), Expect = 4.0 Identities = 18/74 (24%), Positives = 31/74 (41%) Frame = -3
Query: 465 AREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQ 286 A+ G + F DM+ G P +++ ++ + GD E A + G +P Sbjct: 238 AKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDT 297
Query: 285 ETFTSVASSFALVG 244 T+ S+ F VG Sbjct: 298 VTYNSMIDGFGKVG 311
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560, mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2 SV=1 Length = 660
Score = 42.0 bits (97), Expect = 0.002 Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 1/137 (0%) Frame = -3
Query: 462 REGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQE 283 +EG F +M+ G P + L+ Y++SG E A+ L R ++ G P Sbjct: 339 KEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVV 398
Query: 282 TFTSVASSFALVGNQQKGEQLLAAMEHFNLS-GQVTWLSFVDDLLQSGYLKEATETFLKG 106 T++ V + G ++ L+ + + S +D L ++G + EA F + Sbjct: 399 TYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM 458
Query: 105 ADGGYRGTDQLFDALVE 55 ++ G ++AL++ Sbjct: 459 SEKGCTRDSYCYNALID 475
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RZV2 |
Definition |
tr|A9RZV2|A9RZV2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
164 |
Score (bit) |
159.0 |
E-value |
1.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913883|Adiantum capillus-veneris mRNA, clone: YMU001_000037_D10. (521 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RZV2|A9RZV2_PHYPA Predicted protein OS=Physcomitrella paten... 159 1e-37 tr|A7PZ38|A7PZ38_VITVI Chromosome chr4 scaffold_39, whole genome... 157 4e-37 tr|A5ARW7|A5ARW7_VITVI Putative uncharacterized protein OS=Vitis... 155 9e-37 tr|Q8LNP4|Q8LNP4_ORYSJ Putative chloroplast RNA processing prote... 154 3e-36 tr|Q8H902|Q8H902_ORYSJ Putative DNA binding domain containing pr... 154 3e-36 tr|Q9M8Y2|Q9M8Y2_ARATH T6K12.12 protein OS=Arabidopsis thaliana ... 150 3e-35 tr|B8BHB8|B8BHB8_ORYSI Putative uncharacterized protein OS=Oryza... 92 1e-17 tr|A3C5H7|A3C5H7_ORYSJ Putative uncharacterized protein OS=Oryza... 92 1e-17 tr|A3C5H1|A3C5H1_ORYSJ Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|Q8LNR5|Q8LNR5_ORYSJ Putative stress inducible protein OS=Oryz... 71 3e-11 tr|Q8LNR2|Q8LNR2_ORYSJ Putative uncharacterized protein OSJNBa00... 71 3e-11 tr|Q337M8|Q337M8_ORYSJ Tetratricopeptide repeat, putative, expre... 71 3e-11 tr|Q109L1|Q109L1_ORYSJ PsbP family protein, expressed OS=Oryza s... 71 3e-11 tr|Q109L0|Q109L0_ORYSJ Os10g0461100 protein OS=Oryza sativa subs... 71 3e-11 tr|Q109K8|Q109K8_ORYSJ cDNA clone:J013158D14, full insert sequen... 71 3e-11 tr|Q0IX76|Q0IX76_ORYSJ Os10g0460900 protein OS=Oryza sativa subs... 70 5e-11 tr|A2Z876|A2Z876_ORYSI Putative uncharacterized protein OS=Oryza... 63 1e-08 tr|Q109K9|Q109K9_ORYSJ PsbP family protein, expressed OS=Oryza s... 61 3e-08 tr|B6U1C3|B6U1C3_MAIZE Putative uncharacterized protein OS=Zea m... 53 1e-05 tr|A9T9D8|A9T9D8_PHYPA Predicted protein OS=Physcomitrella paten... 53 1e-05 tr|A7NWY9|A7NWY9_VITVI Chromosome chr5 scaffold_2, whole genome ... 52 2e-05 tr|A9SC54|A9SC54_PHYPA Predicted protein (Fragment) OS=Physcomit... 51 4e-05 tr|B8B2Y8|B8B2Y8_ORYSI Putative uncharacterized protein OS=Oryza... 50 5e-05 tr|A3B8H0|A3B8H0_ORYSJ Putative uncharacterized protein OS=Oryza... 50 5e-05 tr|A5BHI6|A5BHI6_VITVI Putative uncharacterized protein (Chromos... 50 7e-05 tr|Q6MWD7|Q6MWD7_ORYSJ B1358B12.18 protein OS=Oryza sativa subsp... 49 1e-04 tr|Q25A92|Q25A92_ORYSA B0812A04.6 protein OS=Oryza sativa GN=B08... 49 1e-04 tr|A3AUK8|A3AUK8_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|A2XUC2|A2XUC2_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|Q75HY8|Q75HY8_ORYSJ Putative uncharacterized protein OSJNBb00... 49 1e-04
>tr|A9RZV2|A9RZV2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_207299 PE=4 SV=1 Length = 803
Score = 159 bits (401), Expect = 1e-37 Identities = 75/164 (45%), Positives = 110/164 (67%) Frame = -3
Query: 492 LFMENLMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRE 313 +F+E +M KAR+ D G E M GL+ GPR+++GL V+Y+RSGD EGA+ ALK+ Sbjct: 1 MFLEAIMEKARKADVEGVEEALTGMSLAGLDAGPRAYYGLTVAYARSGDPEGAVQALKKA 60
Query: 312 LNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLLQSGYLK 133 + +G PL E+ + + G Q+G+++LAAME N + +V WL+ V++LL + YL+ Sbjct: 61 VQAGVNPLPESMLACVRLYGSTGQPQRGKEILAAMEKLNYNPRVAWLTLVEELLNNSYLQ 120
Query: 132 EATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCIRMLRFM 1 EA E +++G +GG RGTD LFD +VE N+ I HANCI +LR M Sbjct: 121 EANEVYIEGLEGGLRGTDVLFDRIVEANSIIGDHANCISVLRLM 164
>tr|A7PZ38|A7PZ38_VITVI Chromosome chr4 scaffold_39, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026730001 PE=4 SV=1 Length = 818
Score = 157 bits (396), Expect = 4e-37 Identities = 76/167 (45%), Positives = 109/167 (65%) Frame = -3
Query: 519 SCAENDLRFLFMENLMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAE 340 S E LR FME LM +AR D G F DMVA GL+PGPRSFHGL+VS +GD E Sbjct: 58 SAGEKALRLTFMEELMERARSADTAGVSEVFYDMVAAGLSPGPRSFHGLIVSTVLNGDDE 117
Query: 339 GALHALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVD 160 GA+ +L+REL++G PL ETF ++ F G +G ++LAAME N + WL V+ Sbjct: 118 GAMQSLRRELSAGLRPLHETFVALIRLFGSKGYATRGLEILAAMEKLNFDIRKAWLVLVE 177
Query: 159 DLLQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCI 19 +L++ +L++A + FLKGA GG R T++L+D L+E++ ++ H+N + Sbjct: 178 ELVRHNHLEDANKVFLKGAKGGLRATNELYDLLIEEDCKVGDHSNAL 224
>tr|A5ARW7|A5ARW7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023135 PE=4 SV=1 Length = 298
Score = 155 bits (393), Expect = 9e-37 Identities = 76/167 (45%), Positives = 108/167 (64%) Frame = -3
Query: 519 SCAENDLRFLFMENLMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAE 340 S E LR FME LM AR D G F DMVA GL+PGPRSFHGL+VS +GD E Sbjct: 58 SAGEKALRLTFMEELMEXARSADTAGVSEVFYDMVAAGLSPGPRSFHGLIVSTVLNGDDE 117
Query: 339 GALHALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVD 160 GA+ +L+REL++G PL ETF ++ F G +G ++LAAME N + WL V+ Sbjct: 118 GAMQSLRRELSAGLRPLHETFVALIRLFGSKGYATRGLEILAAMEKLNFDIRKAWLVLVE 177
Query: 159 DLLQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCI 19 +L++ +L++A + FLKGA GG R T++L+D L+E++ ++ H+N + Sbjct: 178 ELVRHNHLEDANKVFLKGAKGGLRATNELYDLLIEEDCKVGDHSNAL 224
>tr|Q8LNP4|Q8LNP4_ORYSJ Putative chloroplast RNA processing protein OS=Oryza sativa subsp. japonica GN=OSJNBa0042E19.39 PE=4 SV=1 Length = 730
Score = 154 bits (388), Expect = 3e-36 Identities = 73/164 (44%), Positives = 107/164 (65%) Frame = -3
Query: 510 ENDLRFLFMENLMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGAL 331 E LR F+E L +AR D G DMVA GL+PGPRSFHGLV ++ +GDAEGA+ Sbjct: 76 EKGLRLAFLEQLAERARAADAAGVADAIYDMVAAGLSPGPRSFHGLVAAHVLAGDAEGAM 135
Query: 330 HALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLL 151 +L+REL+SG PL ETF ++ FA G +G ++LAAME + + WL V++L+ Sbjct: 136 QSLRRELSSGVRPLHETFVALVRVFAKKGLATRGMEILAAMERYKYDIRKAWLILVEELV 195
Query: 150 QSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCI 19 + YL++A FLKG +GG +GTD+++D L+E++ + H+N + Sbjct: 196 NNNYLEDANTVFLKGTEGGLQGTDEIYDLLIEEDCKAGDHSNAL 239
>tr|Q8H902|Q8H902_ORYSJ Putative DNA binding domain containing protein (SAP domain containing protein, expressed) OS=Oryza sativa subsp. japonica GN=OSJNBa0071K18.11 PE=4 SV=1 Length = 898
Score = 154 bits (388), Expect = 3e-36 Identities = 73/164 (44%), Positives = 107/164 (65%) Frame = -3
Query: 510 ENDLRFLFMENLMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAEGAL 331 E LR F+E L +AR D G DMVA GL+PGPRSFHGLV ++ +GDAEGA+ Sbjct: 76 EKGLRLAFLEQLAERARAADAAGVADAIYDMVAAGLSPGPRSFHGLVAAHVLAGDAEGAM 135
Query: 330 HALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDLL 151 +L+REL+SG PL ETF ++ FA G +G ++LAAME + + WL V++L+ Sbjct: 136 QSLRRELSSGVRPLHETFVALVRVFAKKGLATRGMEILAAMERYKYDIRKAWLILVEELV 195
Query: 150 QSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCI 19 + YL++A FLKG +GG +GTD+++D L+E++ + H+N + Sbjct: 196 NNNYLEDANTVFLKGTEGGLQGTDEIYDLLIEEDCKAGDHSNAL 239
>tr|Q9M8Y2|Q9M8Y2_ARATH T6K12.12 protein OS=Arabidopsis thaliana GN=At3g04260 PE=4 SV=1 Length = 913
Score = 150 bits (380), Expect = 3e-35 Identities = 71/167 (42%), Positives = 107/167 (64%) Frame = -3
Query: 519 SCAENDLRFLFMENLMVKAREGDPVGAEATFADMVAVGLNPGPRSFHGLVVSYSRSGDAE 340 S E LR FM+ LM +AR D G DM+A GL+PGPRSFHGLVV+++ +GD + Sbjct: 66 SALERSLRLTFMDELMERARNRDTSGVSEVIYDMIAAGLSPGPRSFHGLVVAHALNGDEQ 125
Query: 339 GALHALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVD 160 GA+H+L++EL +G PL ET ++ GN +G ++LAAME + WL V+ Sbjct: 126 GAMHSLRKELGAGQRPLPETMIALVRLSGSKGNATRGLEILAAMEKLKYDIRQAWLILVE 185
Query: 159 DLLQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCI 19 +L++ +L++A + FLKGA GG R TDQL+D ++E++ + H+N + Sbjct: 186 ELMRINHLEDANKVFLKGARGGMRATDQLYDLMIEEDCKAGDHSNAL 232
>tr|B8BHB8|B8BHB8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33922 PE=4 SV=1 Length = 836
Score = 92.4 bits (228), Expect = 1e-17 Identities = 41/105 (39%), Positives = 69/105 (65%) Frame = -3
Query: 333 LHALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDL 154 + +L+REL+SG PL ETF ++ FA G +G ++LAAME + + WL V++L Sbjct: 72 MQSLRRELSSGVRPLHETFVALVRVFAKKGLATRGMEILAAMERYKYDIRKAWLILVEEL 131
Query: 153 LQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCI 19 + + YL++A FLKG +GG +GTD+++D L+E++ + H+N + Sbjct: 132 VNNNYLEDANTVFLKGTEGGLQGTDEIYDLLIEEDCKAGDHSNAL 176
>tr|A3C5H7|A3C5H7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030549 PE=4 SV=1 Length = 764
Score = 92.4 bits (228), Expect = 1e-17 Identities = 41/105 (39%), Positives = 69/105 (65%) Frame = -3
Query: 333 LHALKRELNSGHIPLQETFTSVASSFALVGNQQKGEQLLAAMEHFNLSGQVTWLSFVDDL 154 + +L+REL+SG PL ETF ++ FA G +G ++LAAME + + WL V++L Sbjct: 1 MQSLRRELSSGVRPLHETFVALVRVFAKKGLATRGMEILAAMERYKYDIRKAWLILVEEL 60
Query: 153 LQSGYLKEATETFLKGADGGYRGTDQLFDALVEKNAEINHHANCI 19 + + YL++A FLKG +GG +GTD+++D L+E++ + H+N + Sbjct: 61 VNNNYLEDANTVFLKGTEGGLQGTDEIYDLLIEEDCKAGDHSNAL 105
>tr|A3C5H1|A3C5H1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030543 PE=4 SV=1 Length = 364
Score = 71.6 bits (174), Expect = 2e-11 Identities = 38/73 (52%), Positives = 51/73 (69%) Frame = -3
Query: 417 VAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVASSFALVGNQ 238 VA G +PGPRSFHGLV+S G+AEGA+ +L+REL+SG PL+E F ++ FA Sbjct: 65 VAAGRSPGPRSFHGLVLS----GNAEGAMQSLRRELSSGMHPLRENFVALVHVFAKNDLT 120
Query: 237 QKGEQLLAAMEHF 199 KG ++LAAME + Sbjct: 121 TKGMEILAAMERY 133
>tr|Q8LNR5|Q8LNR5_ORYSJ Putative stress inducible protein OS=Oryza sativa subsp. japonica GN=OSJNBa0042E19.1 PE=4 SV=1 Length = 380
Score = 71.2 bits (173), Expect = 3e-11 Identities = 38/78 (48%), Positives = 53/78 (67%) Frame = -3
Query: 417 VAVGLNPGPRSFHGLVVSYSRSGDAEGALHALKRELNSGHIPLQETFTSVASSFALVGNQ 238 VA G +PGPRSFHGLV+S G+AEGA+ +L+REL+SG PL+E F ++ FA Sbjct: 65 VAAGRSPGPRSFHGLVLS----GNAEGAMQSLRRELSSGMHPLRENFVALVHVFAKNDLT 120
Query: 237 QKGEQLLAAMEHFNLSGQ 184 KG ++LAAME ++ + Sbjct: 121 TKGMEILAAMERQSIKSE 138
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