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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913887
Clone id YMU001_000037_E02
Library
Length 364
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000037_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTTTTTGAATGAGTTTATGGTTATCCATAATAGATCCAAGCCATACCAT
CCTTAAGAAAATGGCCAAGCAGAGCACACAAACAAAATCCTTAGCTTTGTGCTTACAAGA
TTATAAGCTCTAGACATACTAAGCGGGATATGAATTTCCATCATCTCTATGAGCTTATAG
GGTTTCCTACAAAATGGCTATGAACGCTTCTCCTTTTAATCTGGTCTATGCACTTGATGC
AATACTGTCAATGGAGTTTTTACTTCCAACACTACGAGTTGCACATAACATAGAATGGAT
GGGTCATGACCTGCCTGAATGATTTGAGAGTCTTGAACAATTAGATGAGCGAAGGCTAGC
AGCC
■■Homology search results ■■ -
sp_hit_id B0BT71
Definition sp|B0BT71|NHAB_ACTPJ Na(+)/H(+) antiporter nhaB OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03)
Align length 33
Score (bit) 30.4
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913887|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_E02.
         (347 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|B0BT71|NHAB_ACTPJ Na(+)/H(+) antiporter nhaB OS=Actinobacillu...    30   2.8  
sp|A3MZ40|NHAB_ACTP2 Na(+)/H(+) antiporter nhaB OS=Actinobacillu...    30   2.8  

>sp|B0BT71|NHAB_ACTPJ Na(+)/H(+) antiporter nhaB OS=Actinobacillus
           pleuropneumoniae serotype 3 (strain JL03) GN=nhaB PE=3
           SV=1
          Length = 513

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 162 RVSY-KMAMNASPFNLVYALDAILSMEFLLPTL 257
           R+SY KM   A P+ +V ++   LS+EFLLP L
Sbjct: 468 RLSYGKMLYMALPYTIVLSIIGFLSLEFLLPPL 500


>sp|A3MZ40|NHAB_ACTP2 Na(+)/H(+) antiporter nhaB OS=Actinobacillus
           pleuropneumoniae serotype 5b (strain L20) GN=nhaB PE=3
           SV=1
          Length = 513

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +3

Query: 162 RVSY-KMAMNASPFNLVYALDAILSMEFLLPTL 257
           R+SY KM   A P+ +V ++   LS+EFLLP L
Sbjct: 468 RLSYGKMLYMALPYTIVLSIIGFLSLEFLLPPL 500
tr_hit_id A5C043
Definition tr|A5C043|A5C043_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 76
Score (bit) 49.3
E-value 2.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913887|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_E02.
         (347 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5C043|A5C043_VITVI Putative uncharacterized protein OS=Vitis...    49   2e-07
tr|A5B2H9|A5B2H9_VITVI Putative uncharacterized protein OS=Vitis...    49   3e-07
tr|A5C4Y9|A5C4Y9_VITVI Putative uncharacterized protein OS=Vitis...    49   4e-07
tr|A5B6Y5|A5B6Y5_VITVI Putative uncharacterized protein OS=Vitis...    49   4e-07
tr|A5B120|A5B120_VITVI Putative uncharacterized protein OS=Vitis...    49   4e-07
tr|A5BHA9|A5BHA9_VITVI Putative uncharacterized protein OS=Vitis...    49   4e-07
tr|A5B5Q5|A5B5Q5_VITVI Putative uncharacterized protein OS=Vitis...    49   4e-07
tr|A5AQR2|A5AQR2_VITVI Putative uncharacterized protein OS=Vitis...    48   5e-07
tr|A5AY22|A5AY22_VITVI Putative uncharacterized protein OS=Vitis...    49   5e-07
tr|A5B0Q3|A5B0Q3_VITVI Putative uncharacterized protein OS=Vitis...    48   5e-07
tr|A5BA29|A5BA29_VITVI Putative uncharacterized protein OS=Vitis...    48   5e-07
tr|A5BYX1|A5BYX1_VITVI Putative uncharacterized protein OS=Vitis...    49   5e-07
tr|A5C5F1|A5C5F1_VITVI Putative uncharacterized protein OS=Vitis...    49   6e-07
tr|A5BB53|A5BB53_VITVI Putative uncharacterized protein OS=Vitis...    49   6e-07
tr|A5AJJ6|A5AJJ6_VITVI Putative uncharacterized protein OS=Vitis...    49   6e-07
tr|A5BPS7|A5BPS7_VITVI Putative uncharacterized protein OS=Vitis...    49   6e-07
tr|A5AVK2|A5AVK2_VITVI Putative uncharacterized protein OS=Vitis...    48   6e-07
tr|A5AFD7|A5AFD7_VITVI Putative uncharacterized protein OS=Vitis...    49   6e-07
tr|A5BDL7|A5BDL7_VITVI Putative uncharacterized protein OS=Vitis...    48   6e-07
tr|A5BYG4|A5BYG4_VITVI Putative uncharacterized protein OS=Vitis...    49   8e-07
tr|A5BQS5|A5BQS5_VITVI Putative uncharacterized protein OS=Vitis...    49   8e-07
tr|A5B3D7|A5B3D7_VITVI Putative uncharacterized protein OS=Vitis...    48   8e-07
tr|A5B1B7|A5B1B7_VITVI Putative uncharacterized protein OS=Vitis...    48   8e-07
tr|A5AKS4|A5AKS4_VITVI Putative uncharacterized protein OS=Vitis...    48   8e-07
tr|A5ADX2|A5ADX2_VITVI Putative uncharacterized protein OS=Vitis...    47   9e-07
tr|A5APF3|A5APF3_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-06
tr|A5BIJ0|A5BIJ0_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-06
tr|A5BNP2|A5BNP2_VITVI Putative uncharacterized protein OS=Vitis...    48   1e-06
tr|A5BYJ0|A5BYJ0_VITVI Putative uncharacterized protein OS=Vitis...    47   1e-06
tr|A5B3S7|A5B3S7_VITVI Putative uncharacterized protein OS=Vitis...    47   1e-06

>tr|A5C043|A5C043_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_023296 PE=4 SV=1
          Length = 1855

 Score = 49.3 bits (116), Expect(2) = 2e-07
 Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVA-----HNIEWMGHDLP 299
            + P +L AYR S++ ++ A+P++LVY ++A+L +E  + +LRVA       +EW      
Sbjct: 1696 KLPFALWAYRTSFRTSIGATPYSLVYGMEAVLPVEIEMRSLRVALEQHISEVEW----AQ 1751

Query: 300  E*FESLEQLDERRLAA 347
              ++ L  LDE+RL A
Sbjct: 1752 SRYDQLSLLDEKRLRA 1767



 Score = 28.5 bits (62), Expect(2) = 2e-07
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 5    EFMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            E+ + H+RS  Y P  NG  E  NK +  +L ++
Sbjct: 1653 EYGIQHHRSSAYRPQTNGAVEAANKNIKRILRKM 1686


>tr|A5B2H9|A5B2H9_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_024102 PE=4 SV=1
          Length = 2037

 Score = 48.9 bits (115), Expect(2) = 3e-07
 Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVA-----HNIEWMGHDLP 299
            + P SL AYR S++ ++ A+P++LVY ++A+L +E  + +LRVA        EW      
Sbjct: 1854 KLPFSLWAYRTSFRTSIGATPYSLVYGMEAVLPVEIEMRSLRVALEQHISEAEW----AQ 1909

Query: 300  E*FESLEQLDERRLAA 347
              ++ L  LDE+RL A
Sbjct: 1910 SRYDQLNLLDEKRLRA 1925



 Score = 28.5 bits (62), Expect(2) = 3e-07
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 5    EFMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            E+ + H+RS  Y P  NG  E  NK +  +L ++
Sbjct: 1811 EYGIQHHRSSAYRPQTNGAVEAANKNIKRILRKM 1844


>tr|A5C4Y9|A5C4Y9_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_013805 PE=4 SV=1
          Length = 2463

 Score = 48.5 bits (114), Expect(2) = 4e-07
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVAHNIEWMGHDLPE---- 302
            + P +L AYR S++ +  A+P++LVY ++A+L +E  + +LRVA     +   +PE    
Sbjct: 1739 KLPFALWAYRTSFRTSTGATPYSLVYGMEAMLPVEIEMGSLRVA-----LEQQIPEADWA 1793

Query: 303  --*FESLEQLDERRLAA 347
               F+ L  LDERRL A
Sbjct: 1794 QARFDQLNLLDERRLRA 1810



 Score = 28.5 bits (62), Expect(2) = 4e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 8    FMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            + + H+RS  Y P  NG  E  NK +  +L R+
Sbjct: 1697 YXIRHHRSSAYRPQTNGAVEAANKNIKRILRRM 1729


>tr|A5B6Y5|A5B6Y5_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_008801 PE=4 SV=1
          Length = 2318

 Score = 48.5 bits (114), Expect(2) = 4e-07
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVAHNIEWMGHDLPE---- 302
            + P +L AYR S++ +  A+P++LVY ++A+L +E  + +LRVA     +   +PE    
Sbjct: 2159 KLPFALWAYRTSFRTSTGATPYSLVYGMEAMLPVEIEMGSLRVA-----LEQQIPEADRA 2213

Query: 303  --*FESLEQLDERRLAA 347
               F+ L  LDERRL A
Sbjct: 2214 QARFDQLNLLDERRLRA 2230



 Score = 28.5 bits (62), Expect(2) = 4e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 8    FMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            + + H+RS  Y P  NG  E  NK +  +L R+
Sbjct: 2117 YSIRHHRSSAYRPQTNGAVEAANKNIKRILRRM 2149


>tr|A5B120|A5B120_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_028523 PE=4 SV=1
          Length = 2317

 Score = 48.5 bits (114), Expect(2) = 4e-07
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVAHNIEWMGHDLPE---- 302
            + P +L AYR S++ +  A+P++LVY ++A+L +E  + +LRVA     +   +PE    
Sbjct: 2158 KLPFALWAYRTSFRTSTGATPYSLVYGMEAMLPVEIEMGSLRVA-----LEQQIPEADWA 2212

Query: 303  --*FESLEQLDERRLAA 347
               F+ L  LDERRL A
Sbjct: 2213 QARFDQLNLLDERRLRA 2229



 Score = 28.5 bits (62), Expect(2) = 4e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 8    FMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            + + H+RS  Y P  NG  E  NK +  +L R+
Sbjct: 2116 YSIRHHRSSAYRPQTNGAVEAANKNIKRILRRM 2148


>tr|A5BHA9|A5BHA9_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_034081 PE=4 SV=1
          Length = 1998

 Score = 48.5 bits (114), Expect(2) = 4e-07
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVAHNIEWMGHDLPE---- 302
            + P +L AYR S++ +  A+P++LVY ++A+L +E  + +LRVA     +   +PE    
Sbjct: 1839 KLPFALWAYRTSFRTSTGATPYSLVYGMEAMLPVEIEMGSLRVA-----LEQQIPEADWA 1893

Query: 303  --*FESLEQLDERRLAA 347
               F+ L  LDERRL A
Sbjct: 1894 QARFDQLNLLDERRLRA 1910



 Score = 28.5 bits (62), Expect(2) = 4e-07
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 8    FMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            + + H+RS  Y P  NG  E  NK +  +L R+
Sbjct: 1797 YSIRHHRSSAYRPQTNGAVEAANKNIKRILRRM 1829


>tr|A5B5Q5|A5B5Q5_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_036912 PE=4 SV=1
          Length = 1896

 Score = 48.5 bits (114), Expect(2) = 4e-07
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVAHNIEWMGHDLPE---- 302
            + P +L AYR S++ +  A+P++LVY ++A+L +E  + +LRVA     +   +PE    
Sbjct: 1777 KLPFALWAYRTSFRTSTGATPYSLVYGMEAMLPVEIEMGSLRVA-----LEQQIPEADWA 1831

Query: 303  --*FESLEQLDERRLAA 347
               F+ L  LDERRL A
Sbjct: 1832 QARFDQLNLLDERRLRA 1848



 Score = 28.5 bits (62), Expect(2) = 4e-07
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 8    FMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            + + H+RS  Y P  NG  + TNK +  +L R+
Sbjct: 1735 YSIRHHRSSAYRPQTNGAIKATNKNIKRILRRM 1767


>tr|A5AQR2|A5AQR2_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_038505 PE=4 SV=1
          Length = 2157

 Score = 48.1 bits (113), Expect(2) = 5e-07
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVA-----HNIEWMGHDLP 299
            + P +L AYR S++ +  A+P++LVY ++A+L +E  + +LRVA        EW      
Sbjct: 1998 KLPFALWAYRTSFRTSTGATPYSLVYGMEAVLPVETEMGSLRVALEQQISETEW----AQ 2053

Query: 300  E*FESLEQLDERRLAA 347
              F+ L  LDERRL A
Sbjct: 2054 ARFDQLNLLDERRLRA 2069



 Score = 28.5 bits (62), Expect(2) = 5e-07
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 5    EFMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            E+ + H+RS  Y P  NG  E  NK +  +L ++
Sbjct: 1955 EYGIRHHRSSAYRPQTNGAVEAANKNIKRILRKM 1988


>tr|A5AY22|A5AY22_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_019060 PE=4 SV=1
          Length = 2004

 Score = 49.3 bits (116), Expect(2) = 5e-07
 Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVAHNIEWMGHDLPE---- 302
            + P +L AYR S++ +  A+P++LVY ++A+L +E  + +LRVA     +   +PE    
Sbjct: 1845 KLPFALWAYRTSFRTSTGATPYSLVYGMEAVLPVEIEMGSLRVA-----LEQQIPETDWA 1899

Query: 303  --*FESLEQLDERRLAA 347
               F+ L  LDERRL A
Sbjct: 1900 QARFDQLNLLDERRLRA 1916



 Score = 27.3 bits (59), Expect(2) = 5e-07
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 8    FMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            + + H+RS  Y P  NG  E  NK +  +L ++
Sbjct: 1803 YSIRHHRSSAYRPQTNGAVEAANKNIKRILRKM 1835


>tr|A5B0Q3|A5B0Q3_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_016014 PE=4 SV=1
          Length = 1853

 Score = 48.1 bits (113), Expect(2) = 5e-07
 Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
 Frame = +3

Query: 135  EFPSSL*AYRVSYKMAMNASPFNLVYALDAILSMEFLLPTLRVA-----HNIEWMGHDLP 299
            + P +L AYR S++ +  A+P++LVY ++A+L +E  + +LRVA        EW      
Sbjct: 1694 KLPFALWAYRTSFRTSTGATPYSLVYGMEAVLPVETEMGSLRVALEQQISETEW----AQ 1749

Query: 300  E*FESLEQLDERRLAA 347
              F+ L  LDERRL A
Sbjct: 1750 ARFDQLNLLDERRLRA 1765



 Score = 28.5 bits (62), Expect(2) = 5e-07
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +2

Query: 5    EFMVIHNRSKPYHP*ENGQAEHTNKILSFVLTRL 106
            E+ + H+RS  Y P  NG  E  NK +  +L ++
Sbjct: 1651 EYGIRHHRSSAYRPQTNGAVEAANKNIKRILRKM 1684