BP913900
Clone id YMU001_000037_F03
Library
Length 488
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000037_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGAATTGCTGACCATACGCATTATGGAACATAAATAAACCGATATGTTGGTGGCCAAA
AAGGCCACATGATGCTTCGAAAAGTAGTCTTCCCCTAAAAGAGAGGTTATTCTTGTGAAG
ATGCATTATAGGGGTACTGCCTCTTGGATGTTACATCGAATCTCGCCACAATAATTCACG
CGATGTGTGAGGTGTTCTCTTCATGCTGAGACTCTTGCACACTTGCTTTGGAGTTGTCAA
CATATTAGAAATTGCTCGATCCGTAAGGTTACACTTTCCCTCGCAGTATTTTGGAAACAC
TTTTGGTTGTTTGGGGTGTCACATGCACATGGCTCTGTGTGCTACGTGGACATGACTCAT
CGACTTCCACAACCAATTTTTGTGACAGACTTGGACACTCCAAGTCAAGAATCAATCGCG
ACAGCACCACATAACCACTTCAAAACAATTCACAGATCACAATAGATTTGCACTGGCCCG
CGGAGTTC
■■Homology search results ■■ -
sp_hit_id Q09726
Definition sp|Q09726|YA46_SCHPO Uncharacterized protein C31A2.06 OS=Schizosaccharomyces pombe
Align length 83
Score (bit) 32.0
E-value 1.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913900|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_F03.
(488 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q09726|YA46_SCHPO Uncharacterized protein C31A2.06 OS=Schizos... 32 1.5
sp|Q9ZTK5|DAT_CATRO Deacetylvindoline O-acetyltransferase OS=Cat... 30 4.5
sp|Q7U5L3|MURE_SYNPX UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--... 30 7.6
sp|Q6GLJ1|BTBDH_XENLA BTB/POZ domain-containing protein 17 OS=Xe... 30 7.6
sp|Q9M2Q6|SPL15_ARATH Squamosa promoter-binding-like protein 15 ... 29 9.9

>sp|Q09726|YA46_SCHPO Uncharacterized protein C31A2.06
OS=Schizosaccharomyces pombe GN=SPAC31A2.06 PE=2 SV=1
Length = 542

Score = 32.0 bits (71), Expect = 1.5
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Frame = +1

Query: 229 WSCQHIRN--CSIRKVTLSLAVFWKHFWLFGVSHAHGSVCYVDMTHRLPQPIFVTDLDTP 402
W+C I N SI +T + ++K L + H Y D+ H + +T TP
Sbjct: 189 WTCLSIENFGISIHVITKNFREYYK---LDNIEHVKDETLYSDLEHGKQSRVSLTSKSTP 245

Query: 403 SQESIATAPHNHFKTIHRSQ*IC 471
+NH RS C
Sbjct: 246 DNSLPPNFINNHSNVFRRSFHTC 268


>sp|Q9ZTK5|DAT_CATRO Deacetylvindoline O-acetyltransferase
OS=Catharanthus roseus GN=DAT PE=1 SV=1
Length = 439

Score = 30.4 bits (67), Expect = 4.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1

Query: 334 SVCYVDMTHRLPQPIFVTDLDTPSQESI 417
S CY+ +H +P P+ V+D P Q++I
Sbjct: 176 SACYLSSSHHVPTPLLVSDSIFPRQDNI 203


>sp|Q7U5L3|MURE_SYNPX
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
6-diaminopimelate ligase OS=Synechococcus sp. (strain
WH8102) GN=murE PE=3 SV=1
Length = 500

Score = 29.6 bits (65), Expect = 7.6
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -3

Query: 168 WRDSM*HPRGSTPIMHLHKNNLSFRGRLLFEASCGLFGHQHIGLFMFHN 22
WR S+ P+ ++ L RGRLL A G F +G F N
Sbjct: 263 WRSSLGDPQAELQMVDLEMTGQGVRGRLLSPAGSGAFCSPLLGRFNLMN 311


>sp|Q6GLJ1|BTBDH_XENLA BTB/POZ domain-containing protein 17
OS=Xenopus laevis GN=btbd17 PE=2 SV=2
Length = 470

Score = 29.6 bits (65), Expect = 7.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -1

Query: 182 RVNYCGEIRCNIQEAVPL*CIFTRITSLLGEDYFSKHHVAFLATNISVYL 33
R YCGEI N+ +A+PL SK+HV L I+ Y+
Sbjct: 111 RYFYCGEISVNLNQAIPL------------HRLASKYHVTALQRGITEYM 148


>sp|Q9M2Q6|SPL15_ARATH Squamosa promoter-binding-like protein 15
OS=Arabidopsis thaliana GN=SPL15 PE=2 SV=1
Length = 354

Score = 29.3 bits (64), Expect = 9.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2

Query: 359 IDFHNQFL*QTWTLQVKNQSRQHHITTSKQFTDHNRFALARG 484
I H Q+L QTW + +S H+++ Q ++ F ++ G
Sbjct: 275 ISTHQQYLSQTWEVIAGEKSNSHYMSPVSQISEPADFQISNG 316


tr_hit_id B3DFD6
Definition tr|B3DFD6|B3DFD6_9PULM NADH dehydrogenase subunit 2 OS=Onchidella celtica
Align length 53
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913900|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_F03.
(488 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B3DFD6|B3DFD6_9PULM NADH dehydrogenase subunit 2 OS=Onchidell... 35 2.5
tr|A2EIX5|A2EIX5_TRIVA Putative uncharacterized protein OS=Trich... 35 2.5
tr|A6F945|A6F945_9GAMM Ribonuclease BN OS=Moritella sp. PE36 GN=... 33 5.5
tr|Q7EYN1|Q7EYN1_ORYSJ Os08g0379000 protein OS=Oryza sativa subs... 33 9.3
tr|A3BSM8|A3BSM8_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.3
tr|A2GBE3|A2GBE3_TRIVA Putative uncharacterized protein OS=Trich... 33 9.3
tr|A2G1G9|A2G1G9_TRIVA Putative uncharacterized protein OS=Trich... 33 9.3

>tr|B3DFD6|B3DFD6_9PULM NADH dehydrogenase subunit 2 OS=Onchidella
celtica GN=nad2 PE=4 SV=1
Length = 307

Score = 34.7 bits (78), Expect = 2.5
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +1

Query: 268 VTLSLAVFWKHFWLFGVSHAHG--SVCYVDMTHRLPQPIFVTDLDTPSQESIA 420
V L LA+F HFW+ GV + G SVC++ ++P F+++ ++ ES++
Sbjct: 94 VCLKLAIFPGHFWVTGVVYGLGWVSVCFILGPLKVPPLAFLSEFNSIFPESVS 146


>tr|A2EIX5|A2EIX5_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_204710 PE=4 SV=1
Length = 229

Score = 34.7 bits (78), Expect = 2.5
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3

Query: 447 CFEVVMWCCRD*FLTWSVQVCHKNWLWKSMSHV 349
C+E M+CC +WS+Q+ + N WK++ ++
Sbjct: 104 CYEEGMYCCECCLFSWSLQISNDNQTWKTIHNI 136


>tr|A6F945|A6F945_9GAMM Ribonuclease BN OS=Moritella sp. PE36 GN=rbn
PE=4 SV=1
Length = 300

Score = 33.5 bits (75), Expect = 5.5
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3

Query: 300 LLVVWGVTCTWLCVLRGHDSSTSTTNFCDRLGHSKSRI 413
+L+VW C WL VL G + + S T F D+L H K+++
Sbjct: 263 ILLVWIYLC-WLIVLLGAEITASLTEFNDQLKHKKAQL 299


>tr|Q7EYN1|Q7EYN1_ORYSJ Os08g0379000 protein OS=Oryza sativa subsp.
japonica GN=OSJNBb0011E04.121 PE=4 SV=1
Length = 1161

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1

Query: 179 VNYCGEIRCNIQEAVPL*CIFTRITSLLGEDYFSKH 72
V+YCG C +E + +F R SL+G+DY H
Sbjct: 87 VSYCGFAMCTYEEPAHIRRLFERALSLVGKDYLCYH 122


>tr|A3BSM8|A3BSM8_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_026050 PE=4 SV=1
Length = 1163

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1

Query: 179 VNYCGEIRCNIQEAVPL*CIFTRITSLLGEDYFSKH 72
V+YCG C +E + +F R SL+G+DY H
Sbjct: 125 VSYCGFAMCTYEEPAHIRRLFERALSLVGKDYLCYH 160


>tr|A2GBE3|A2GBE3_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_181180 PE=4 SV=1
Length = 216

Score = 32.7 bits (73), Expect = 9.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3

Query: 447 CFEVVMWCCRD*FLTWSVQVCHKNWLWKSMSHV 349
C++ V +CC +WS+Q+ + N WK++ V
Sbjct: 103 CYDEVHYCCECCLFSWSLQISNDNSTWKTVHKV 135


>tr|A2G1G9|A2G1G9_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_381130 PE=4 SV=1
Length = 219

Score = 32.7 bits (73), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3

Query: 447 CFEVVMWCCRD*FLTWSVQVCHKNWLWKSMSHV 349
C+E +CC +WS+QV + N WK++ V
Sbjct: 106 CYESASYCCYCCLFSWSLQVSNDNTTWKTVHKV 138