BP913905
Clone id YMU001_000037_F08
Library
Length 437
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000037_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGTGGGATATCGTGTGCCAGCTGTATGCTACTAAACCTATTGCAGTAGATGAAAACCAGC
CTCTAGACTTGTATGCCCAACTCTCCAAGTAGCATCTCTAGCCATGCTACCTCACATGCT
GCCACTGTAGCACCCCTATACTCTGGCTCTGTACTTGACAAAGCAACTTGGATTGCTTCT
TGCTGCTCCAAGTAACAACAATACTCCCAAGGTGAAAACACAAACCCGTTGGTAGATCAC
CAATCATATAGACTACCATCCGCACATGTGTAACAATAGAGTTGCACCTCCGTGCCAACC
TCATACAAGAGTGCATAATCCAAAGTGGCACTTTCATAGCTCAATGTACGCCTCACTACA
TATAAGTGTGGCTTCCTAATAAACTGACTCTCAAACTCAACCGTGTAACTCCAATCCCAA
TTGTCAAGTAAATCAAG
■■Homology search results ■■ -
sp_hit_id P10978
Definition sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum
Align length 139
Score (bit) 48.5
E-value 1.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913905|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_F08.
(437 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra... 49 1e-05
sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster G... 49 1e-05
sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg0... 36 0.080
sp|Q95LY5|TTC12_MACFA Tetratricopeptide repeat protein 12 (Fragm... 33 0.68
sp|Q9H892|TTC12_HUMAN Tetratricopeptide repeat protein 12 OS=Hom... 32 0.89
sp|Q8SPZ8|RNAS8_PANTR Ribonuclease 8 OS=Pan troglodytes GN=RNASE... 30 3.4
sp|O18937|RNAS2_AOTTR Non-secretory ribonuclease OS=Aotus trivir... 29 9.8
sp|O60240|PLIN_HUMAN Perilipin OS=Homo sapiens GN=PLIN PE=2 SV=1 29 9.8

>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
Length = 1328

Score = 48.5 bits (114), Expect = 1e-05
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 5/139 (3%)
Frame = -1

Query: 416 DWSYTVEFESQFIRKP---HLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCAD--GS 252
D ++ V S+F+ P H V+ L Y T L + G++ L YT AD G
Sbjct: 1128 DIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFG-GSDPILKGYTDADMAGD 1186

Query: 251 LYDW*STNGFVFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGI 72
+ + S+ G++F+ + + VALS+TE EY AT E+ WL+ L ELG+
Sbjct: 1187 IDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGL 1246

Query: 71 QV*RLVFIYCNRFSSIQLA 15
V +YC+ S+I L+
Sbjct: 1247 HQKEYV-VYCDSQSAIDLS 1264


>sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP
PE=1 SV=3
Length = 1409

Score = 48.5 bits (114), Expect = 1e-05
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Frame = -1

Query: 356 VRRTLSYESATLDYALLYE--VGTEVQLYCYTCAD--GSLYDW*STNGFVFSPWEY---C 198
++R L Y T+D L+++ + E ++ Y +D GS D ST G++F +++ C
Sbjct: 1221 LKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLIC 1280

Query: 197 CYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGIQV*RLVFIYCNRFSSIQL 18
++Q + VA SSTE EY A E WL+ LL + I++ + IY + I +
Sbjct: 1281 WNTKRQNS--VAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISI 1338

Query: 17 AHD 9
A++
Sbjct: 1339 ANN 1341


>sp|P92519|M810_ARATH Uncharacterized mitochondrial protein
AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1
Length = 240

Score = 35.8 bits (81), Expect = 0.080
Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
Frame = -1

Query: 416 DWSYTVEFESQFIRKPHLY---VVRRTLSYESATLDYALLYEVGTE--VQLYCYTCADGS 252
D SY V Q + +P L +++R L Y T+ + L ++ VQ +C + G
Sbjct: 116 DISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGC 175

Query: 251 LYDW*STNGFVFSPWEYCCYL-------EQQEAIQVALSSTEPEYRGATVAACEVAW 102
ST GF C +L + V+ SSTE EYR + A E+ W
Sbjct: 176 TSTRRSTTGF-------CTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225


>sp|Q95LY5|TTC12_MACFA Tetratricopeptide repeat protein 12
(Fragment) OS=Macaca fascicularis GN=TTC12 PE=2 SV=1
Length = 577

Score = 32.7 bits (73), Expect = 0.68
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -2

Query: 307 CMRLARRCNSIVTHVRMVVYMIGDLPTGLCFHLGSIVVTWSSKKQSKLLCQVQSQSIGVL 128
C+ L RC V R V+Y + L LC + W+ + + L + SQ G+L
Sbjct: 478 CLSLLARCEENVALFREVIYTLLGLMMNLCLQAPFVSEVWAVEVSRRCLSLLNSQDGGIL 537


>sp|Q9H892|TTC12_HUMAN Tetratricopeptide repeat protein 12 OS=Homo
sapiens GN=TTC12 PE=2 SV=1
Length = 705

Score = 32.3 bits (72), Expect = 0.89
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -2

Query: 307 CMRLARRCNSIVTHVRMVVYMIGDLPTGLCFHLGSIVVTWSSKKQSKLLCQVQSQSIGVL 128
C+ L RC V R V+Y + L LC + W+ + + L + SQ G+L
Sbjct: 478 CLSLLARCEEDVDLFREVIYTLLGLMMNLCLQAPFVSEVWAVEVSRRCLSLLNSQDGGIL 537


>sp|Q8SPZ8|RNAS8_PANTR Ribonuclease 8 OS=Pan troglodytes GN=RNASE8
PE=3 SV=1
Length = 157

Score = 30.4 bits (67), Expect = 3.4
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2

Query: 143 LALYLTKQLGLLLAAPSNNNTPKVKTQTRW*ITNHIDYHPHMCNNRVA 286
L L L LGL +A + PK T ++W T H+ P CN+ ++
Sbjct: 11 LLLLLLLLLGLWVAEVLVSAKPKDMTSSQWFKTQHVQPGPQACNSAIS 58


>sp|O18937|RNAS2_AOTTR Non-secretory ribonuclease OS=Aotus
trivirgatus GN=RNASE2 PE=3 SV=1
Length = 158

Score = 28.9 bits (63), Expect = 9.8
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +2

Query: 137 YTLALYLTKQLGLLLAAPSNNNTPKVKTQTRW*ITNHIDYHPHMCNNRVAPPCQPHTRVH 316
+T + L LGLL S + P+ T+ +W HI P C N + + R
Sbjct: 6 FTSQICLLLLLGLLGVEGSLHAAPQKFTRAQWFSIQHIQTTPLRCTNAMRAINKYQHRCK 65

Query: 317 NPKWHFHSSMYASLHI 364
N H++ A +++
Sbjct: 66 NQNTFLHTTFAAVVNV 81


>sp|O60240|PLIN_HUMAN Perilipin OS=Homo sapiens GN=PLIN PE=2 SV=1
Length = 522

Score = 28.9 bits (63), Expect = 9.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1

Query: 182 QEAIQVALSSTEPEYRGATVAACEVAW 102
+ +I V ++ST + GA +A CE+AW
Sbjct: 128 RNSISVPIASTSDKVLGAALAGCELAW 154


tr_hit_id A5BGK7
Definition tr|A5BGK7|A5BGK7_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 141
Score (bit) 74.3
E-value 3.0e-12
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913905|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_F08.
(437 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5BGK7|A5BGK7_VITVI Putative uncharacterized protein OS=Vitis... 74 3e-12
tr|Q10RM4|Q10RM4_ORYSJ Retrotransposon protein, putative, unclas... 73 8e-12
tr|A5C788|A5C788_VITVI Putative uncharacterized protein OS=Vitis... 73 8e-12
tr|A5BHT9|A5BHT9_VITVI Putative uncharacterized protein OS=Vitis... 73 8e-12
tr|A5AKW8|A5AKW8_VITVI Putative uncharacterized protein OS=Vitis... 72 1e-11
tr|A5BJX0|A5BJX0_VITVI Putative uncharacterized protein OS=Vitis... 72 2e-11
tr|A5B3I2|A5B3I2_VITVI Putative uncharacterized protein OS=Vitis... 72 2e-11
tr|A5BVZ9|A5BVZ9_VITVI Putative uncharacterized protein OS=Vitis... 71 3e-11
tr|Q9SXQ3|Q9SXQ3_ARATH Polyprotein OS=Arabidopsis thaliana GN=At... 70 5e-11
tr|Q9SXQ1|Q9SXQ1_ARATH Polyprotein OS=Arabidopsis thaliana PE=2 ... 70 5e-11
tr|Q94HW7|Q94HW7_ARATH Polyprotein, putative OS=Arabidopsis thal... 70 5e-11
tr|Q94HW2|Q94HW2_ARATH Polyprotein, putative (Polyprotein) OS=Ar... 70 5e-11
tr|A5C9X9|A5C9X9_VITVI Putative uncharacterized protein OS=Vitis... 70 5e-11
tr|A5BPV9|A5BPV9_VITVI Putative uncharacterized protein OS=Vitis... 70 5e-11
tr|Q9SXQ5|Q9SXQ5_ARATH Polyprotein OS=Arabidopsis thaliana GN=At... 70 7e-11
tr|Q84MV7|Q84MV7_ORYSJ Retrotransposon protein, putative, unclas... 70 7e-11
tr|Q10K27|Q10K27_ORYSJ Retrotransposon protein, putative, Ty1-co... 70 7e-11
tr|A5BFS0|A5BFS0_VITVI Putative uncharacterized protein OS=Vitis... 70 7e-11
tr|A5B1F3|A5B1F3_VITVI Putative uncharacterized protein OS=Vitis... 70 7e-11
tr|Q153Y8|Q153Y8_HYDMC Polyprotein (Fragment) OS=Hydrangea macro... 69 9e-11
tr|A5AWP3|A5AWP3_VITVI Putative uncharacterized protein OS=Vitis... 69 9e-11
tr|Q9ZT94|Q9ZT94_ARATH Putative polyprotein of LTR transposon OS... 69 1e-10
tr|Q9SXQ2|Q9SXQ2_ARATH Polyprotein OS=Arabidopsis thaliana GN=At... 69 1e-10
tr|A5B9R3|A5B9R3_VITVI Putative uncharacterized protein OS=Vitis... 69 2e-10
tr|A5BT67|A5BT67_VITVI Putative uncharacterized protein OS=Vitis... 68 2e-10
tr|A5AR90|A5AR90_VITVI Putative uncharacterized protein OS=Vitis... 68 2e-10
tr|A5BVQ3|A5BVQ3_VITVI Putative uncharacterized protein OS=Vitis... 68 3e-10
tr|Q9FH39|Q9FH39_ARATH Copia-type polyprotein (Polyprotein) OS=A... 67 3e-10
tr|Q9C7Y1|Q9C7Y1_ARATH Copia-type polyprotein, putative; 28768-3... 67 3e-10
tr|A5C2Y1|A5C2Y1_VITVI Putative uncharacterized protein OS=Vitis... 67 4e-10

>tr|A5BGK7|A5BGK7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_007301 PE=4 SV=1
Length = 973

Score = 74.3 bits (181), Expect = 3e-12
Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Frame = -1

Query: 416 DWSYTVEFESQFI---RKPHLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCAD--GS 252
D SY V S+++ +KPHL VRR L + T+DY LLY+ G + +L Y AD G
Sbjct: 762 DISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKGEDCKLVGYCDADYAGD 821

Query: 251 LYDW*STNGFVFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGI 72
ST G+VF + V+L +TE EYR A +AA E WL L+ +L
Sbjct: 822 HDTRRSTTGYVFMLGSGAISWCSKRQPTVSLLTTEAEYRAAAMAAQESTWLIRLMNDLHQ 881

Query: 71 QV*RLVFIYCNRFSSIQLAHD 9
V V +YC+ S+++LA +
Sbjct: 882 LVDYAVPLYCDNQSAVRLAEN 902


>tr|Q10RM4|Q10RM4_ORYSJ Retrotransposon protein, putative,
unclassified OS=Oryza sativa subsp. japonica
GN=LOC_Os03g05850 PE=4 SV=1
Length = 1409

Score = 72.8 bits (177), Expect = 8e-12
Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 6/139 (4%)
Frame = -1

Query: 416 DWSYTVEFESQFIRKP---HLYVVRRTLSYESATLDYALLYEVGT-EVQLYCYTCAD--G 255
D SY V S+F+ +P H V++ L Y T+DY L+Y GT +++ YT +D G
Sbjct: 1201 DLSYAVGVASRFMERPTVMHFKAVKQILRYIKGTMDYGLVYAAGTGALKITGYTDSDLAG 1260

Query: 254 SLYDW*STNGFVFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELG 75
L D ST G F + Q+ VALSS E E+ AT AAC+ WL +LL E+
Sbjct: 1261 DLDDRRSTGGMAFYINQSLVAWSSQKQKTVALSSCEAEFMAATTAACQALWLRLLLAEVA 1320

Query: 74 IQV*RLVFIYCNRFSSIQL 18
+ V ++ + S+I L
Sbjct: 1321 GVEEKAVKLFVDNRSAIAL 1339


>tr|A5C788|A5C788_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_026292 PE=4 SV=1
Length = 1161

Score = 72.8 bits (177), Expect = 8e-12
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Frame = -1

Query: 416 DWSYTVEFESQFI---RKPHLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCAD--GS 252
D SY V S+++ +KPHL VRR L + T+DY LLY+ G + +L Y AD G
Sbjct: 1016 DISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKGEDYKLVGYCDADYVGD 1075

Query: 251 LYDW*STNGFVFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGI 72
ST G+VF + V+LS+ E EYR A +AA E WL L+ +L
Sbjct: 1076 HDTRRSTTGYVFMLGSRAISWCSKRQPTVSLSTMEXEYRAAPMAAQESTWLIRLMNDLHQ 1135

Query: 71 QV*RLVFIYCNRFSSIQLAHD 9
V +YC+ S+++LA +
Sbjct: 1136 XVDYAXPLYCDNQSAVRLAEN 1156


>tr|A5BHT9|A5BHT9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_016610 PE=4 SV=1
Length = 1021

Score = 72.8 bits (177), Expect = 8e-12
Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 5/139 (3%)
Frame = -1

Query: 416 DWSYTVEFESQFIRKP---HLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCAD--GS 252
D + V S+++ P HL V +R L Y T ++ + Y+ G + +L YT +D G
Sbjct: 820 DMMFVVSLISRYMENPTELHLQVAKRVLRYLKGTTEFGIFYKKGGDDELAAYTDSDYAGD 879

Query: 251 LYDW*STNGFVFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGI 72
L D ST+G+VF ++ V+LS+TE E+ A AC+ WL+ +LG+L
Sbjct: 880 LEDKKSTSGYVFLLSSRAVSWSSRKQPVVSLSTTEAEFIAAASCACQAVWLKRVLGKLSQ 939

Query: 71 QV*RLVFIYCNRFSSIQLA 15
+ I+C+ S+I+L+
Sbjct: 940 NQGKSTTIHCDNSSAIKLS 958


>tr|A5AKW8|A5AKW8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_027864 PE=4 SV=1
Length = 1300

Score = 72.0 bits (175), Expect = 1e-11
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Frame = -1

Query: 416 DWSYTVEFESQFI---RKPHLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCAD--GS 252
D SY V S+++ +KPHL VRR L + T+DY LLY+ + +L Y AD G
Sbjct: 1089 DISYAVGVMSRYMQNPKKPHLEAVRRILRHVKGTIDYGLLYKKXEDCKLVGYCDADYAGD 1148

Query: 251 LYDW*STNGFVFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGI 72
ST G+VF + V+LS+TE EYR A +A E WL L+ +L
Sbjct: 1149 HDTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEYRAAAMATQESMWLIRLMNDLHQ 1208

Query: 71 QV*RLVFIYCNRFSSIQLAHD 9
V V +YC+ S+++LA +
Sbjct: 1209 LVDYAVPLYCDNQSAVRLAEN 1229


>tr|A5BJX0|A5BJX0_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_003097 PE=4 SV=1
Length = 1052

Score = 71.6 bits (174), Expect = 2e-11
Identities = 47/125 (37%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = -1

Query: 377 RKPHLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCAD--GSLYDW*STNGFVFSPWE 204
+KPHL VVRR L + +T+DY LLY+ G + +L Y AD G ST G+VF
Sbjct: 857 KKPHLEVVRRILRHVKSTIDYGLLYKKGEDCKLVGYCDADYTGDHDTRRSTTGYVFMLGS 916

Query: 203 YCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGIQV*RLVFIYCNRFSSI 24
+ V+LS+TE EYR A +A E WL L+ +L V V +YC+ ++
Sbjct: 917 RAISWCSKRQPTVSLSTTEAEYRAAAMATQESTWLIXLMNDLHQLVDYAVPLYCDNQLAV 976

Query: 23 QLAHD 9
LA +
Sbjct: 977 HLAEN 981


>tr|A5B3I2|A5B3I2_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_004365 PE=4 SV=1
Length = 1265

Score = 71.6 bits (174), Expect = 2e-11
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Frame = -1

Query: 416 DWSYTVEFESQFIRKP---HLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCAD--GS 252
D + V S+++ P HL +R L Y T ++ + Y G + +L YT +D G
Sbjct: 1087 DMMFVVSLISRYMENPTELHLQAAKRVLRYLQGTTEFGIFYRKGGDDELVTYTBSDHAGD 1146

Query: 251 LYDW*STNGFVFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGI 72
L + ST+G+VF ++ V+LSSTE E+ A AC+ WL+ +LG+LG
Sbjct: 1147 LDERKSTSGYVFLLSSGAISWSSKKQPIVSLSSTEAEFIAAASCACQAVWLKRVLGKLGQ 1206

Query: 71 QV*RLVFIYCNRFSSIQLA 15
+ I+C+ S+I+L+
Sbjct: 1207 NQGKPTIIHCDSSSAIKLS 1225


>tr|A5BVZ9|A5BVZ9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_021899 PE=4 SV=1
Length = 431

Score = 70.9 bits (172), Expect = 3e-11
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Frame = -1

Query: 416 DWSYTVEFESQFIRKP---HLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCADGSLY 246
D +YTV QF+ P HL VV+R L Y +L Y L ++ + + L YT AD +
Sbjct: 118 DIAYTVNKLCQFMHAPTSTHLQVVKRVLRYLKGSLFYGLSFQPSSSLDLIAYTDADWASC 177

Query: 245 --DW*STNGF-VFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELG 75
D ST+G+ +F + ++ + V+ SSTE EYRG AA E+ W++ LL EL
Sbjct: 178 PDDRRSTSGYCIFFGGNLVSWSASKQKV-VSRSSTESEYRGLANAAAELTWIQSLLKELF 236

Query: 74 IQV*RLVFIYCNRFSSIQLA 15
I + + +YC+ S+ LA
Sbjct: 237 IPLFQPPVLYCDNLSTTYLA 256


>tr|Q9SXQ3|Q9SXQ3_ARATH Polyprotein OS=Arabidopsis thaliana GN=AtRE1
PE=4 SV=1
Length = 1447

Score = 70.1 bits (170), Expect = 5e-11
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Frame = -1

Query: 416 DWSYTVEFESQFIRKP---HLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCAD--GS 252
D SY V SQF+ P HL ++R L Y + T ++ + + G + L+ Y+ AD G
Sbjct: 1242 DISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWTGD 1301

Query: 251 LYDW*STNGFVFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGI 72
D+ STNG++ + ++ V SSTE EYR + E+ W+ LL ELGI
Sbjct: 1302 KDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGI 1361

Query: 71 QV*RLVFIYCNRFSSIQL 18
++ R IYC+ + L
Sbjct: 1362 RLTRPPVIYCDNVGATYL 1379


>tr|Q9SXQ1|Q9SXQ1_ARATH Polyprotein OS=Arabidopsis thaliana PE=2 SV=1
Length = 1431

Score = 70.1 bits (170), Expect = 5e-11
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Frame = -1

Query: 416 DWSYTVEFESQFIRKP---HLYVVRRTLSYESATLDYALLYEVGTEVQLYCYTCAD--GS 252
D SY V SQF+ P HL ++R L Y + T ++ + + G + L+ Y+ AD G
Sbjct: 1226 DISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGD 1285

Query: 251 LYDW*STNGFVFSPWEYCCYLEQQEAIQVALSSTEPEYRGATVAACEVAWLEMLLGELGI 72
D+ STNG++ + ++ V SSTE EYR + E+ W+ LL ELGI
Sbjct: 1286 KDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGI 1345

Query: 71 QV*RLVFIYCNRFSSIQL 18
++ R IYC+ + L
Sbjct: 1346 RLTRPPVIYCDNVGATYL 1363