BP913906 |
Clone id |
YMU001_000037_F09 |
Library |
YMU01 |
Length |
499 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000037_F09. |
Accession |
BP913906 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1851Contig1 |
Sequence |
GGAGAGTATGCTGTCAAGATTGCCGATGCAACCCGATTTAGTGTTTTGGCTGTCATTGCT AGGTGCATGCCGAGTACATGGCCATGTAGAATTGGGCAAAAGAGCATATGATTGTGCATT GCAACTACAGCCCAATGATGCTGCCGTGTATGTTAGCATGTCAAATATTTATGCAAATGC TAGGCGTATCGCATATGTCAATGTTATGGATAAAGGTTAGCCAGAAGTGCACTGAAGCCT CCTTTTGGTATCCTTTTCTCCGAGGTATGCATACATTGAAGGTCGTGGTGGTTAGCTTGA GCAGTGTGGGTGGCTTTGATAGTCACAACTTATCCTTGGTTTGAATATGCTAGCTTGAAA CTTGAAGATCCTCTCTTGTGCAAGACTAGCCTTGGTGGAAGTCACGTTCTATCTTTGATA CGATTTATGGGATCTCGAATTTGGAAGGTCTCTGTGCTGCTATTACTTTTAATTGGTACT AATTAAGAAAATATGGGTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FI80 |
Definition |
sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana |
Align length |
69 |
Score (bit) |
65.5 |
E-value |
1.0e-10 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R4G1 |
Definition |
tr|A7R4G1|A7R4G1_VITVI Chromosome undetermined scaffold_682, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
60 |
Score (bit) |
71.6 |
E-value |
2.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913906|Adiantum capillus-veneris mRNA, clone: YMU001_000037_F09. (499 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7R4G1|A7R4G1_VITVI Chromosome undetermined scaffold_682, who... 72 2e-11 tr|A7R352|A7R352_VITVI Chromosome undetermined scaffold_484, who... 72 2e-11 tr|A5BVF2|A5BVF2_VITVI Putative uncharacterized protein OS=Vitis... 72 2e-11 tr|A7R678|A7R678_VITVI Chromosome undetermined scaffold_1179, wh... 71 2e-11 tr|A5BL66|A5BL66_VITVI Putative uncharacterized protein OS=Vitis... 71 2e-11 tr|A7QW05|A7QW05_VITVI Chromosome chr2 scaffold_196, whole genom... 71 3e-11 tr|A5BZ17|A5BZ17_VITVI Putative uncharacterized protein OS=Vitis... 71 3e-11 tr|A7R3R7|A7R3R7_VITVI Chromosome undetermined scaffold_560, who... 69 1e-10 tr|A7QWH8|A7QWH8_VITVI Chromosome undetermined scaffold_203, who... 68 3e-10 tr|A5AP45|A5AP45_VITVI Putative uncharacterized protein OS=Vitis... 68 3e-10 tr|A7P2H4|A7P2H4_VITVI Chromosome chr1 scaffold_5, whole genome ... 66 8e-10 tr|A5BGC7|A5BGC7_VITVI Putative uncharacterized protein OS=Vitis... 66 8e-10 tr|Q6DT52|Q6DT52_ARALP AT1G74600 (Fragment) OS=Arabidopsis lyrat... 66 1e-09 tr|Q5W965|Q5W965_PHYPA PPR868-14 OS=Physcomitrella patens PE=2 SV=1 65 2e-09 tr|A9SDQ1|A9SDQ1_PHYPA Predicted protein OS=Physcomitrella paten... 65 2e-09 tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea... 65 2e-09 tr|A7PXY9|A7PXY9_VITVI Chromosome chr15 scaffold_37, whole genom... 65 2e-09 tr|A5BWE3|A5BWE3_VITVI Putative uncharacterized protein OS=Vitis... 65 2e-09 tr|Q5ZAF9|Q5ZAF9_ORYSJ Pentatricopeptide (PPR) repeat-containing... 65 2e-09 tr|Q5W963|Q5W963_PHYPA PPR1106-17 OS=Physcomitrella patens PE=2 ... 65 2e-09 tr|Q0JLH3|Q0JLH3_ORYSJ Os01g0600400 protein (Fragment) OS=Oryza ... 65 2e-09 tr|B8AB74|B8AB74_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|A9T5P5|A9T5P5_PHYPA Predicted protein OS=Physcomitrella paten... 65 2e-09 tr|A7QGW1|A7QGW1_VITVI Chromosome chr16 scaffold_94, whole genom... 65 2e-09 tr|A7PDG9|A7PDG9_VITVI Chromosome chr17 scaffold_12, whole genom... 65 2e-09 tr|A7PAH3|A7PAH3_VITVI Chromosome chr14 scaffold_9, whole genome... 65 2e-09 tr|A5B3U0|A5B3U0_VITVI Putative uncharacterized protein OS=Vitis... 65 2e-09 tr|A2ZV37|A2ZV37_ORYSJ Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|Q6F363|Q6F363_ORYSJ Os05g0574800 protein OS=Oryza sativa subs... 64 3e-09 tr|B8AX86|B8AX86_ORYSI Putative uncharacterized protein OS=Oryza... 64 3e-09
>tr|A7R4G1|A7R4G1_VITVI Chromosome undetermined scaffold_682, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004379001 PE=4 SV=1 Length = 573
Score = 71.6 bits (174), Expect = 2e-11 Identities = 30/60 (50%), Positives = 46/60 (76%) Frame = +2
Query: 8 MLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYANARR 187 ++ R+PM+PD+V W +LLGACR+HG+VE+GK+ L+L+P+ +YV +SNIY A+R Sbjct: 437 LIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQR 496
>tr|A7R352|A7R352_VITVI Chromosome undetermined scaffold_484, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00013464001 PE=4 SV=1 Length = 573
Score = 71.6 bits (174), Expect = 2e-11 Identities = 30/60 (50%), Positives = 46/60 (76%) Frame = +2
Query: 8 MLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYANARR 187 ++ R+PM+PD+V W +LLGACR+HG+VE+GK+ L+L+P+ +YV +SNIY A+R Sbjct: 437 LIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQR 496
>tr|A5BVF2|A5BVF2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027628 PE=4 SV=1 Length = 688
Score = 71.6 bits (174), Expect = 2e-11 Identities = 30/60 (50%), Positives = 46/60 (76%) Frame = +2
Query: 8 MLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYANARR 187 ++ R+PM+PD+V W +LLGACR+HG+VE+GK+ L+L+P+ +YV +SNIY A+R Sbjct: 552 LIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQR 611
>tr|A7R678|A7R678_VITVI Chromosome undetermined scaffold_1179, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008013001 PE=4 SV=1 Length = 704
Score = 71.2 bits (173), Expect = 2e-11 Identities = 31/62 (50%), Positives = 47/62 (75%) Frame = +2
Query: 2 ESMLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYANA 181 E++++R+P P + W SLLGACR HG++EL +A + LQL+P++AA YV +SN+YA+A Sbjct: 501 ENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASA 560
Query: 182 RR 187 R Sbjct: 561 GR 562
>tr|A5BL66|A5BL66_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037837 PE=4 SV=1 Length = 719
Score = 71.2 bits (173), Expect = 2e-11 Identities = 31/62 (50%), Positives = 47/62 (75%) Frame = +2
Query: 2 ESMLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYANA 181 E++++R+P P + W SLLGACR HG++EL +A + LQL+P++AA YV +SN+YA+A Sbjct: 501 ENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPYVVLSNMYASA 560
Query: 182 RR 187 R Sbjct: 561 GR 562
>tr|A7QW05|A7QW05_VITVI Chromosome chr2 scaffold_196, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00007631001 PE=4 SV=1 Length = 586
Score = 70.9 bits (172), Expect = 3e-11 Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 3/74 (4%) Frame = +2
Query: 2 ESMLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYA-- 175 E ++ +P++PD V W +LLGAC++HG+VE+GKR + ++L P+D+ YV++SNIYA Sbjct: 371 EELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASL 430
Query: 176 -NARRIAYVNVMDK 214 N +A V +M K Sbjct: 431 GNWEGVAKVRLMMK 444
>tr|A5BZ17|A5BZ17_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029899 PE=4 SV=1 Length = 613
Score = 70.9 bits (172), Expect = 3e-11 Identities = 33/74 (44%), Positives = 52/74 (70%), Gaps = 3/74 (4%) Frame = +2
Query: 2 ESMLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYA-- 175 E ++ +P++PD V W +LLGAC++HG+VE+GKR + ++L P+D+ YV++SNIYA Sbjct: 393 EELILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASL 452
Query: 176 -NARRIAYVNVMDK 214 N +A V +M K Sbjct: 453 GNWEGVAKVRLMMK 466
>tr|A7R3R7|A7R3R7_VITVI Chromosome undetermined scaffold_560, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003900001 PE=4 SV=1 Length = 609
Score = 68.9 bits (167), Expect = 1e-10 Identities = 26/60 (43%), Positives = 43/60 (71%) Frame = +2
Query: 2 ESMLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYANA 181 E ++ ++PM+PD W SLLG CR+HG+++L KRA + +++P + A Y +++NIYA A Sbjct: 480 EDIIDKMPMKPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLANIYATA 539
>tr|A7QWH8|A7QWH8_VITVI Chromosome undetermined scaffold_203, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008660001 PE=4 SV=1 Length = 512
Score = 67.8 bits (164), Expect = 3e-10 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +2
Query: 8 MLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYANARR 187 ++ R+PM+PD V W +LLGAC HGHVEL ++A +L+P++ YV +SNIYA A R Sbjct: 375 LILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGR 434
>tr|A5AP45|A5AP45_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022076 PE=4 SV=1 Length = 967
Score = 67.8 bits (164), Expect = 3e-10 Identities = 30/60 (50%), Positives = 42/60 (70%) Frame = +2
Query: 8 MLSRLPMQPDLVFWLSLLGACRVHGHVELGKRAYDCALQLQPNDAAVYVSMSNIYANARR 187 ++ R+PM+PD V W +LLGAC HGHVEL ++A +L+P++ YV +SNIYA A R Sbjct: 830 LILRMPMEPDSVVWGTLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGR 889
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