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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913911
Clone id YMU001_000037_G02
Library
Length 499
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000037_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTTGCCAAACAACTTGAGCTAACTTGCAAGTTCAAAAGCTGATAAAG
AAAACGCATAGGAAACACTAATTTATCAACCCCCCTCGATCCCATAGGCATGGCATTTAG
GGAGCCCACATTTTCACTAGAAAGCAAAGCCCATCACTCTGCTTGTATTGCAAAGAGTTG
TATCCACCTTGCTAGTTGACAAATGTAGCTATTTTAACTTCTCTGTATAAGCCCAAACTT
ACTGTGCTCAAAAGCCACTCTAGCAAGGATTCCTTTAATTTTCTCTGATAGAGGCACTTT
CCTAACACAAGATCCTTATCCTTACAATGCAGCAAAAAGAATCGACTGCATTCATACGAC
AGACCACCGTGGCTACTGTCCACTCGCTGTGCCTTGTTCCACACACATCGCTTCTCATTA
AGCTTTTGCAATGTCTTGTATTTATCCCAATGGGCCAAGCCTGTTTTCCTCTTTTTTCTT
TCTGCCAAAACTTGTAACA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913911|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_G02.
         (483 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id Q8P3X9
Definition tr|Q8P3X9|Q8P3X9_XANCP Putative uncharacterized protein XCC3939 OS=Xanthomonas campestris pv. campestris
Align length 40
Score (bit) 36.2
E-value 0.83
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913911|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_G02.
         (483 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8P3X9|Q8P3X9_XANCP Putative uncharacterized protein XCC3939 ...    36   0.83 
tr|Q4UPF7|Q4UPF7_XANC8 Putative uncharacterized protein OS=Xanth...    36   0.83 
tr|B0RXV9|B0RXV9_XANCB Putative uncharacterized protein OS=Xanth...    36   0.83 
tr|Q21WW1|Q21WW1_RHOFD Polyphosphate kinase OS=Rhodoferax ferrir...    33   9.2  
tr|Q7QEJ2|Q7QEJ2_ANOGA AGAP000013-PA OS=Anopheles gambiae GN=AGA...    33   9.2  
tr|B6H6C0|B6H6C0_PENCH Pc15g01850 protein OS=Penicillium chrysog...    33   9.2  

>tr|Q8P3X9|Q8P3X9_XANCP Putative uncharacterized protein XCC3939
           OS=Xanthomonas campestris pv. campestris GN=XCC3939 PE=4
           SV=1
          Length = 251

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +2

Query: 326 STAFIRQTTVATVHSLCLVPHTSLLIKLLQCLVFIPMGQA 445
           +T F++Q T++ VH L L PH ++L+    CL  + +G A
Sbjct: 42  TTQFLQQKTISPVHGLTLTPHDAVLLAATCCLPLLNIGAA 81


>tr|Q4UPF7|Q4UPF7_XANC8 Putative uncharacterized protein
           OS=Xanthomonas campestris pv. campestris (strain 8004)
           GN=XC_4027 PE=4 SV=1
          Length = 251

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +2

Query: 326 STAFIRQTTVATVHSLCLVPHTSLLIKLLQCLVFIPMGQA 445
           +T F++Q T++ VH L L PH ++L+    CL  + +G A
Sbjct: 42  TTQFLQQKTISPVHGLTLTPHDAVLLAATCCLPLLNIGAA 81


>tr|B0RXV9|B0RXV9_XANCB Putative uncharacterized protein
           OS=Xanthomonas campestris pv. campestris (strain B100)
           GN=xcc-b100_4126 PE=4 SV=1
          Length = 251

 Score = 36.2 bits (82), Expect = 0.83
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = +2

Query: 326 STAFIRQTTVATVHSLCLVPHTSLLIKLLQCLVFIPMGQA 445
           +T F++Q T++ VH L L PH ++L+    CL  + +G A
Sbjct: 42  TTQFLQQKTISPVHGLTLTPHDAVLLAATCCLPLLNIGAA 81


>tr|Q21WW1|Q21WW1_RHOFD Polyphosphate kinase OS=Rhodoferax
           ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118)
           GN=Rfer_2017 PE=3 SV=1
          Length = 700

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +2

Query: 329 TAFIRQTTVATVHSLCLVPHTSLLIKLLQCLVFIPMGQACFPLFSFC 469
           +AF+R+       +L  VP    L++L Q +  +P+ + CFP++  C
Sbjct: 283 SAFLREQFNLPEQALYRVPGPVNLVRLTQLIDLVPLPKLCFPIYQSC 329


>tr|Q7QEJ2|Q7QEJ2_ANOGA AGAP000013-PA OS=Anopheles gambiae
           GN=AGAP000013 PE=4 SV=4
          Length = 316

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -3

Query: 127 FLVKMWAP*MPC--LWDRGGLIN*CFLCVFFISF*TCKLAQVVW 2
           FLV   AP +PC  LW R   I  C L V +  F  C L  VVW
Sbjct: 28  FLVAFLAPNIPCGFLWLRCAAIAGCILMVLWGWFVACSLDAVVW 71


>tr|B6H6C0|B6H6C0_PENCH Pc15g01850 protein OS=Penicillium chrysogenum
            Wisconsin 54-1255 GN=Pc15g01850 PE=4 SV=1
          Length = 999

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 25/80 (31%), Positives = 41/80 (51%)
 Frame = +3

Query: 192  AILTSLYKPKLTVLKSHSSKDSFNFL**RHFPNTRSLSLQCSKKNRLHSYDRPPWLLSTR 371
            ++LT++ + + +VLKS    +  N L       T   +LQ +  NR++S D  P+ L+  
Sbjct: 780  SVLTTIIQARSSVLKSRLVCE--NCLYTAREALTTLRALQEAFSNRINSIDSYPYFLTWT 837

Query: 372  CALFHTHRFSLSFCNVLYLS 431
              LF    F + FCNV+  S
Sbjct: 838  MLLFPLAPFFVLFCNVIATS 857